RNA–Protein interactions for RNA: ENSMUST00000028748.12

Capn3-201, Transcript of Calpain-3, mousemouse

TSL 1 (best) BASIC

Gene Capn3, Length 2,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Capn3-201ENSMUST00000028748 4933428G20RikQ9D3X4 101 aa4.4□□□□□ -1.7
Capn3-201ENSMUST00000028748 Lce1lQ9D1G7 135 aa4.38□□□□□ -1.71
Capn3-201ENSMUST00000028748 Krtap4-7Q9D732 168 aa4.38□□□□□ -1.71
Capn3-201ENSMUST00000028748 Krtap6-3A0A087WQL6 57 aa4.37□□□□□ -1.71
Capn3-201ENSMUST00000028748 Gm11938Q9D3H4 131 aa4.37□□□□□ -1.71
Capn3-201ENSMUST00000028748 Sprr2dO70555 85 aa4.31□□□□□ -1.72
Capn3-201ENSMUST00000028748 Gm10272F7CZ33 110 aa4.22□□□□□ -1.73
Capn3-201ENSMUST00000028748 Lce1cQ9D1C5 147 aa4.16□□□□□ -1.74
Capn3-201ENSMUST00000028748 Lce1a1Q9CQH5 143 aa4.11□□□□□ -1.75
Capn3-201ENSMUST00000028748 Syne1Q6ZWR6 8799 aa4.1□□□□□ -1.75
Capn3-201ENSMUST00000028748 Lce3bQ9CQM7 98 aa4.09□□□□□ -1.75
Capn3-201ENSMUST00000028748 Krtap20-2E9Q0A8 60 aa4.07□□□□□ -1.76
Capn3-201ENSMUST00000028748 Lce1kJ3QP15 125 aa4.05□□□□□ -1.76
Capn3-201ENSMUST00000028748 Gm10100J3QK64 120 aa4.03□□□□□ -1.76
Capn3-201ENSMUST00000028748 Sprr2iO70560 76 aa4.03□□□□□ -1.76
Capn3-201ENSMUST00000028748 Lce1fB9EJP6 147 aa4.02□□□□□ -1.77
Capn3-201ENSMUST00000028748 A0A1Y7VJH8 109 aa3.99□□□□□ -1.77
Capn3-201ENSMUST00000028748 Krtap19-4Q925H7 84 aa3.97□□□□□ -1.77
Capn3-201ENSMUST00000028748 Gm10142J3KMP7 120 aa3.96□□□□□ -1.78
Capn3-201ENSMUST00000028748 Krtap5-2Q9D5Z7 189 aa3.9□□□□□ -1.79
Capn3-201ENSMUST00000028748 Macf1Q9QXZ0 7354 aaKnown RBP3.87□□□□□ -1.79
Capn3-201ENSMUST00000028748 Gm11568A2A4M2 211 aa3.86□□□□□ -1.79
Capn3-201ENSMUST00000028748 Krtap9-1Q64526 186 aa3.86□□□□□ -1.79
Capn3-201ENSMUST00000028748 Lce3cQ91V05 98 aa3.84□□□□□ -1.79
Capn3-201ENSMUST00000028748 Lce3dE9Q8V1 98 aa3.82□□□□□ -1.8
Capn3-201ENSMUST00000028748 Sprr2hO70559 108 aa3.81□□□□□ -1.8
Capn3-201ENSMUST00000028748 Gm11554B1AQB2 190 aa3.78□□□□□ -1.8
Capn3-201ENSMUST00000028748 Gm11559Q9D3H7 191 aa3.77□□□□□ -1.81
Capn3-201ENSMUST00000028748 Sprr2eO70556 76 aa3.77□□□□□ -1.81
Capn3-201ENSMUST00000028748 Sprr2fO70557 76 aa3.75□□□□□ -1.81
Capn3-201ENSMUST00000028748 Lce3eF8VQJ0 98 aa3.74□□□□□ -1.81
Capn3-201ENSMUST00000028748 Lce3fQ6PAI4 98 aa3.74□□□□□ -1.81
Capn3-201ENSMUST00000028748 Mt1P02802 61 aaKnown RBP3.72□□□□□ -1.81
Capn3-201ENSMUST00000028748 Lce3aQ497I5 98 aa3.68□□□□□ -1.82
Capn3-201ENSMUST00000028748 Gm4553A0A1B0GSA9 284 aa3.67□□□□□ -1.82
Capn3-201ENSMUST00000028748 Gm2431E9Q8S1 172 aa3.59□□□□□ -1.83
Capn3-201ENSMUST00000028748 Gm10153A0A1B0GRL1 320 aa3.57□□□□□ -1.84
Capn3-201ENSMUST00000028748 Hmcn1D3YXG0 5634 aa3.56□□□□□ -1.84
Capn3-201ENSMUST00000028748 A030005L19RikA0A1Y7VIU2 113 aa3.56□□□□□ -1.84
Capn3-201ENSMUST00000028748 Eppk1Q8R0W0 6548 aa3.54□□□□□ -1.84
Capn3-201ENSMUST00000028748 Gm45337A0A1B0GS71 263 aa3.54□□□□□ -1.84
Capn3-201ENSMUST00000028748 Krtap4-16Q91W93 202 aa3.54□□□□□ -1.84
Capn3-201ENSMUST00000028748 ObscnA2AAJ9 8891 aaKnown RBP3.53□□□□□ -1.84
Capn3-201ENSMUST00000028748 Kmt2dQ6PDK2 5588 aa3.52□□□□□ -1.85
Capn3-201ENSMUST00000028748 Muc19Q6PZE0 7524 aa3.47□□□□□ -1.85
Capn3-201ENSMUST00000028748 Gm40460A0A1B0GR10 244 aa3.4□□□□□ -1.86
Capn3-201ENSMUST00000028748 Gm7579A0A1B0GRJ4 243 aa3.4□□□□□ -1.86
Capn3-201ENSMUST00000028748 Krtap5-5Q2TA51 241 aa3.4□□□□□ -1.86
Capn3-201ENSMUST00000028748 Krtap5-4Q62220 223 aa3.4□□□□□ -1.86
Capn3-201ENSMUST00000028748 Mt3P28184 68 aa3.39□□□□□ -1.87
Capn3-201ENSMUST00000028748 Gm11639A0A1D5RLM8 5808 aa3.36□□□□□ -1.87
Capn3-201ENSMUST00000028748 DstQ91ZU6 7393 aaKnown RBP3.35□□□□□ -1.87
Capn3-201ENSMUST00000028748 Gm39115A0A1B0GSH7 232 aa3.3□□□□□ -1.88
Capn3-201ENSMUST00000028748 A0A1Y7VLE6 161 aa3.22□□□□□ -1.89
Capn3-201ENSMUST00000028748 NebE9Q1W3 7152 aa3.19□□□□□ -1.9
Capn3-201ENSMUST00000028748 Gm10024A0A0A0MQA4 119 aa3.19□□□□□ -1.9
Capn3-201ENSMUST00000028748 Gpr98Q8VHN7 6298 aaKnown RBP3.1□□□□□ -1.91
Capn3-201ENSMUST00000028748 Krtap28-10A0A1Y7VP58 119 aa3.09□□□□□ -1.91
Capn3-201ENSMUST00000028748 Gm7544A0A1Y7VJ58 118 aa3.07□□□□□ -1.92
Capn3-201ENSMUST00000028748 AhnakE9Q616 5656 aaKnown RBP2.99□□□□□ -1.93
Capn3-201ENSMUST00000028748 Gm45618A0A1B0GSA0 219 aa2.98□□□□□ -1.93
Capn3-201ENSMUST00000028748 Muc16A0A140LJ72 8478 aa2.95□□□□□ -1.94
Capn3-201ENSMUST00000028748 A030005K14RikA0A1Y7VNY1 122 aa2.87□□□□□ -1.95
Capn3-201ENSMUST00000028748 Krtap28-13A0A087WQP5 138 aa2.79□□□□□ -1.96
Capn3-201ENSMUST00000028748 A0A286YCP9 139 aa2.72□□□□□ -1.97
Capn3-201ENSMUST00000028748 1110025L11RikO09048 78 aa2.71□□□□□ -1.98
Capn3-201ENSMUST00000028748 Krtap6-5Q925H3 78 aa2.71□□□□□ -1.98
Capn3-201ENSMUST00000028748 A030003K21RikA0A1Y7VIM3 128 aa2.69□□□□□ -1.98
Capn3-201ENSMUST00000028748 Gm6217A0A1Y7VJK9 128 aa2.69□□□□□ -1.98
Capn3-201ENSMUST00000028748 A0A1Y7VJ07 166 aa2.65□□□□□ -1.98
Capn3-201ENSMUST00000028748 Gm29735A0A1B0GT06 219 aa2.52□□□□□ -2.01
Capn3-201ENSMUST00000028748 Gm11567Q9D141 195 aa2.5□□□□□ -2.01
Capn3-201ENSMUST00000028748 Sprr2bO70554 98 aa2.47□□□□□ -2.01
Capn3-201ENSMUST00000028748 Gm10229O08631 77 aa2.43□□□□□ -2.02
Capn3-201ENSMUST00000028748 Phgr1Q8K0G7 91 aa2.23□□□□□ -2.05
Capn3-201ENSMUST00000028748 Krtap21-1Q925H4 128 aa2.19□□□□□ -2.06
Capn3-201ENSMUST00000028748 Krtap6-2O08884 159 aa2.13□□□□□ -2.07
Capn3-201ENSMUST00000028748 A030014E15RikA0A1Y7VJV2 120 aa2.13□□□□□ -2.07
Capn3-201ENSMUST00000028748 Krtap5-1Q64507 230 aa1.87□□□□□ -2.11
Capn3-201ENSMUST00000028748 Gm4559A4IF42 199 aa1.46□□□□□ -2.18
Retrieved 80 of 22,080 RNA–protein pairs in 103.6 ms