RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Lce1cQ9D1C5 147 aa6.5□□□□□ -1.37
Ctdsp1-201ENSMUST00000027367 Lce1bQ9D149 137 aa6.46□□□□□ -1.38
Ctdsp1-201ENSMUST00000027367 Fsip2A2ARZ3 6995 aa6.44□□□□□ -1.38
Ctdsp1-201ENSMUST00000027367 Lce3bQ9CQM7 98 aa6.43□□□□□ -1.38
Ctdsp1-201ENSMUST00000027367 Krtap19-4Q925H7 84 aa6.36□□□□□ -1.39
Ctdsp1-201ENSMUST00000027367 Gm10100J3QK64 120 aa6.34□□□□□ -1.39
Ctdsp1-201ENSMUST00000027367 Krtap4-13Q9D7P3 165 aa6.28□□□□□ -1.4
Ctdsp1-201ENSMUST00000027367 2300003K06RikA2A4M0 262 aa6.25□□□□□ -1.41
Ctdsp1-201ENSMUST00000027367 Gm10142J3KMP7 120 aa6.25□□□□□ -1.41
Ctdsp1-201ENSMUST00000027367 Lce1fB9EJP6 147 aa6.24□□□□□ -1.41
Ctdsp1-201ENSMUST00000027367 Lce1a1Q9CQH5 143 aa6.24□□□□□ -1.41
Ctdsp1-201ENSMUST00000027367 Sprr2fO70557 76 aa6.21□□□□□ -1.41
Ctdsp1-201ENSMUST00000027367 Sprr2kO70562 68 aa6.18□□□□□ -1.42
Ctdsp1-201ENSMUST00000027367 Lce3cQ91V05 98 aa6.12□□□□□ -1.43
Ctdsp1-201ENSMUST00000027367 Sprr2eO70556 76 aa6.09□□□□□ -1.43
Ctdsp1-201ENSMUST00000027367 Lce3eF8VQJ0 98 aa6.06□□□□□ -1.44
Ctdsp1-201ENSMUST00000027367 Lce3fQ6PAI4 98 aa6.06□□□□□ -1.44
Ctdsp1-201ENSMUST00000027367 Krtap4-7Q9D732 168 aa6.04□□□□□ -1.44
Ctdsp1-201ENSMUST00000027367 Sprr2hO70559 108 aa6.02□□□□□ -1.45
Ctdsp1-201ENSMUST00000027367 Lce3dE9Q8V1 98 aa6□□□□□ -1.45
Ctdsp1-201ENSMUST00000027367 Lce1kJ3QP15 125 aa6□□□□□ -1.45
Ctdsp1-201ENSMUST00000027367 ObscnA2AAJ9 8891 aaKnown RBP5.97□□□□□ -1.45
Ctdsp1-201ENSMUST00000027367 Krtap31-2Q8CAY5 177 aa5.97□□□□□ -1.45
Ctdsp1-201ENSMUST00000027367 Lce1lQ9D1G7 135 aa5.92□□□□□ -1.46
Ctdsp1-201ENSMUST00000027367 Mt1P02802 61 aaKnown RBP5.89□□□□□ -1.47
Ctdsp1-201ENSMUST00000027367 A0A1Y7VJH8 109 aa5.85□□□□□ -1.47
Ctdsp1-201ENSMUST00000027367 Lce3aQ497I5 98 aa5.81□□□□□ -1.48
Ctdsp1-201ENSMUST00000027367 Gm11568A2A4M2 211 aa5.77□□□□□ -1.49
Ctdsp1-201ENSMUST00000027367 Krtap9-1Q64526 186 aa5.77□□□□□ -1.49
Ctdsp1-201ENSMUST00000027367 Krtap20-2E9Q0A8 60 aa5.77□□□□□ -1.49
Ctdsp1-201ENSMUST00000027367 Krtap4-16Q91W93 202 aa5.77□□□□□ -1.49
Ctdsp1-201ENSMUST00000027367 Krtap6-3A0A087WQL6 57 aa5.75□□□□□ -1.49
Ctdsp1-201ENSMUST00000027367 Krtap5-2Q9D5Z7 189 aa5.69□□□□□ -1.5
Ctdsp1-201ENSMUST00000027367 Gm10153A0A1B0GRL1 320 aa5.42□□□□□ -1.54
Ctdsp1-201ENSMUST00000027367 Macf1Q9QXZ0 7354 aaKnown RBP5.35□□□□□ -1.55
Ctdsp1-201ENSMUST00000027367 Mt3P28184 68 aa5.24□□□□□ -1.57
Ctdsp1-201ENSMUST00000027367 Gm4553A0A1B0GSA9 284 aa5.23□□□□□ -1.57
Ctdsp1-201ENSMUST00000027367 Gm11559Q9D3H7 191 aa5.22□□□□□ -1.57
Ctdsp1-201ENSMUST00000027367 A0A1Y7VLE6 161 aa5.19□□□□□ -1.58
Ctdsp1-201ENSMUST00000027367 Hmcn1D3YXG0 5634 aa5.18□□□□□ -1.58
Ctdsp1-201ENSMUST00000027367 Gm45337A0A1B0GS71 263 aa5.18□□□□□ -1.58
Ctdsp1-201ENSMUST00000027367 Gm10024A0A0A0MQA4 119 aa5.12□□□□□ -1.59
Ctdsp1-201ENSMUST00000027367 Gm11554B1AQB2 190 aa5.1□□□□□ -1.59
Ctdsp1-201ENSMUST00000027367 Gm2431E9Q8S1 172 aa5.09□□□□□ -1.6
Ctdsp1-201ENSMUST00000027367 Kmt2dQ6PDK2 5588 aa5.03□□□□□ -1.6
Ctdsp1-201ENSMUST00000027367 Gm40460A0A1B0GR10 244 aa5.02□□□□□ -1.61
Ctdsp1-201ENSMUST00000027367 Gm7579A0A1B0GRJ4 243 aa5.02□□□□□ -1.61
Ctdsp1-201ENSMUST00000027367 Krtap5-5Q2TA51 241 aa5.02□□□□□ -1.61
Ctdsp1-201ENSMUST00000027367 Krtap5-4Q62220 223 aa5.02□□□□□ -1.61
Ctdsp1-201ENSMUST00000027367 Muc16A0A140LJ72 8478 aa4.74□□□□□ -1.65
Ctdsp1-201ENSMUST00000027367 A030005L19RikA0A1Y7VIU2 113 aa4.66□□□□□ -1.66
Ctdsp1-201ENSMUST00000027367 Gm39115A0A1B0GSH7 232 aa4.65□□□□□ -1.66
Ctdsp1-201ENSMUST00000027367 DstQ91ZU6 7393 aaKnown RBP4.53□□□□□ -1.68
Ctdsp1-201ENSMUST00000027367 1110025L11RikO09048 78 aa4.47□□□□□ -1.69
Ctdsp1-201ENSMUST00000027367 Krtap6-5Q925H3 78 aa4.47□□□□□ -1.69
Ctdsp1-201ENSMUST00000027367 Muc19Q6PZE0 7524 aa4.47□□□□□ -1.69
Ctdsp1-201ENSMUST00000027367 Gm11639A0A1D5RLM8 5808 aa4.46□□□□□ -1.69
Ctdsp1-201ENSMUST00000027367 Eppk1Q8R0W0 6548 aa4.42□□□□□ -1.7
Ctdsp1-201ENSMUST00000027367 AhnakE9Q616 5656 aaKnown RBP4.31□□□□□ -1.72
Ctdsp1-201ENSMUST00000027367 A0A1Y7VJ07 166 aa4.16□□□□□ -1.74
Ctdsp1-201ENSMUST00000027367 NebE9Q1W3 7152 aa4.03□□□□□ -1.76
Ctdsp1-201ENSMUST00000027367 Gm45618A0A1B0GSA0 219 aa4.01□□□□□ -1.77
Ctdsp1-201ENSMUST00000027367 Gm10229O08631 77 aa3.96□□□□□ -1.78
Ctdsp1-201ENSMUST00000027367 Sprr2bO70554 98 aa3.94□□□□□ -1.78
Ctdsp1-201ENSMUST00000027367 Gpr98Q8VHN7 6298 aaKnown RBP3.88□□□□□ -1.79
Ctdsp1-201ENSMUST00000027367 Gm11567Q9D141 195 aa3.84□□□□□ -1.79
Ctdsp1-201ENSMUST00000027367 Gm29735A0A1B0GT06 219 aa3.79□□□□□ -1.8
Ctdsp1-201ENSMUST00000027367 Krtap21-1Q925H4 128 aa3.67□□□□□ -1.82
Ctdsp1-201ENSMUST00000027367 Phgr1Q8K0G7 91 aa3.55□□□□□ -1.84
Ctdsp1-201ENSMUST00000027367 A0A286YCP9 139 aa3.51□□□□□ -1.85
Ctdsp1-201ENSMUST00000027367 Krtap6-2O08884 159 aa3.36□□□□□ -1.87
Ctdsp1-201ENSMUST00000027367 A030003K21RikA0A1Y7VIM3 128 aa2.5□□□□□ -2.01
Ctdsp1-201ENSMUST00000027367 Krtap5-1Q64507 230 aa2.37□□□□□ -2.03
Ctdsp1-201ENSMUST00000027367 Gm4559A4IF42 199 aa2.18□□□□□ -2.06
Ctdsp1-201ENSMUST00000027367 Krtap28-13A0A087WQP5 138 aa2.08□□□□□ -2.08
Ctdsp1-201ENSMUST00000027367 Gm7544A0A1Y7VJ58 118 aa2.07□□□□□ -2.08
Ctdsp1-201ENSMUST00000027367 Krtap28-10A0A1Y7VP58 119 aa1.96□□□□□ -2.1
Ctdsp1-201ENSMUST00000027367 Gm6217A0A1Y7VJK9 128 aa1.93□□□□□ -2.1
Ctdsp1-201ENSMUST00000027367 A030005K14RikA0A1Y7VNY1 122 aa1.92□□□□□ -2.1
Ctdsp1-201ENSMUST00000027367 A030014E15RikA0A1Y7VJV2 120 aa1.69□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 9.9 ms