RNA–Protein interactions for RNA: ENSMUST00000023759.4

Smarcd1-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarcd1, Length 3,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1-201ENSMUST00000023759 Krtap19-4Q925H7 84 aa4.79□□□□□ -1.64
Smarcd1-201ENSMUST00000023759 Krtap4-2B1AQ85 167 aa4.79□□□□□ -1.64
Smarcd1-201ENSMUST00000023759 Sprr2iO70560 76 aa4.77□□□□□ -1.65
Smarcd1-201ENSMUST00000023759 Lce3eF8VQJ0 98 aa4.77□□□□□ -1.65
Smarcd1-201ENSMUST00000023759 Lce3fQ6PAI4 98 aa4.77□□□□□ -1.65
Smarcd1-201ENSMUST00000023759 Krtap4-1Q3UUY3 169 aa4.76□□□□□ -1.65
Smarcd1-201ENSMUST00000023759 Krtap4-16Q91W93 202 aa4.76□□□□□ -1.65
Smarcd1-201ENSMUST00000023759 Mt4P47945 62 aa4.73□□□□□ -1.65
Smarcd1-201ENSMUST00000023759 Lce1gQ9D195 139 aa4.73□□□□□ -1.65
Smarcd1-201ENSMUST00000023759 Sprr2hO70559 108 aa4.63□□□□□ -1.67
Smarcd1-201ENSMUST00000023759 Lce3aQ497I5 98 aa4.63□□□□□ -1.67
Smarcd1-201ENSMUST00000023759 Gm11555B1AQ89 175 aa4.62□□□□□ -1.67
Smarcd1-201ENSMUST00000023759 Sprr2fO70557 76 aa4.58□□□□□ -1.68
Smarcd1-201ENSMUST00000023759 Gm11564A2A4L9 201 aa4.55□□□□□ -1.68
Smarcd1-201ENSMUST00000023759 Gm11563B1AQ90 168 aa4.55□□□□□ -1.68
Smarcd1-201ENSMUST00000023759 Gm11595B1AQA7 289 aa4.55□□□□□ -1.68
Smarcd1-201ENSMUST00000023759 Krtap4-8B1AQA8 209 aa4.55□□□□□ -1.68
Smarcd1-201ENSMUST00000023759 Krtap4-9B1AQA9 244 aa4.54□□□□□ -1.68
Smarcd1-201ENSMUST00000023759 Macf1Q9QXZ0 7354 aaKnown RBP4.54□□□□□ -1.68
Smarcd1-201ENSMUST00000023759 Gm11596B1AQB0 205 aa4.51□□□□□ -1.69
Smarcd1-201ENSMUST00000023759 Lce1bQ9D149 137 aa4.47□□□□□ -1.69
Smarcd1-201ENSMUST00000023759 2300003K06RikA2A4M0 262 aa4.45□□□□□ -1.7
Smarcd1-201ENSMUST00000023759 Krtap4-13Q9D7P3 165 aa4.45□□□□□ -1.7
Smarcd1-201ENSMUST00000023759 Sprr2eO70556 76 aa4.44□□□□□ -1.7
Smarcd1-201ENSMUST00000023759 Lce1lQ9D1G7 135 aa4.43□□□□□ -1.7
Smarcd1-201ENSMUST00000023759 Sprr2kO70562 68 aa4.43□□□□□ -1.7
Smarcd1-201ENSMUST00000023759 Lce1kJ3QP15 125 aa4.42□□□□□ -1.7
Smarcd1-201ENSMUST00000023759 Mt1P02802 61 aaKnown RBP4.25□□□□□ -1.73
Smarcd1-201ENSMUST00000023759 Krtap4-7Q9D732 168 aa4.23□□□□□ -1.73
Smarcd1-201ENSMUST00000023759 Muc19Q6PZE0 7524 aa4.14□□□□□ -1.75
Smarcd1-201ENSMUST00000023759 Kmt2dQ6PDK2 5588 aa4.13□□□□□ -1.75
Smarcd1-201ENSMUST00000023759 Krtap20-2E9Q0A8 60 aa4.09□□□□□ -1.76
Smarcd1-201ENSMUST00000023759 Krtap6-3A0A087WQL6 57 aa4.08□□□□□ -1.76
Smarcd1-201ENSMUST00000023759 Gm11568A2A4M2 211 aa4.05□□□□□ -1.76
Smarcd1-201ENSMUST00000023759 Krtap9-1Q64526 186 aa4.05□□□□□ -1.76
Smarcd1-201ENSMUST00000023759 Gm10024A0A0A0MQA4 119 aa4.04□□□□□ -1.76
Smarcd1-201ENSMUST00000023759 A0A1Y7VJH8 109 aa3.92□□□□□ -1.78
Smarcd1-201ENSMUST00000023759 Hmcn1D3YXG0 5634 aa3.9□□□□□ -1.79
Smarcd1-201ENSMUST00000023759 DstQ91ZU6 7393 aaKnown RBP3.77□□□□□ -1.81
Smarcd1-201ENSMUST00000023759 Krtap5-2Q9D5Z7 189 aa3.77□□□□□ -1.81
Smarcd1-201ENSMUST00000023759 Gm10153A0A1B0GRL1 320 aa3.72□□□□□ -1.81
Smarcd1-201ENSMUST00000023759 A0A1Y7VLE6 161 aa3.72□□□□□ -1.81
Smarcd1-201ENSMUST00000023759 Mt3P28184 68 aa3.7□□□□□ -1.82
Smarcd1-201ENSMUST00000023759 Gm11554B1AQB2 190 aa3.68□□□□□ -1.82
Smarcd1-201ENSMUST00000023759 Eppk1Q8R0W0 6548 aa3.55□□□□□ -1.84
Smarcd1-201ENSMUST00000023759 A030005L19RikA0A1Y7VIU2 113 aa3.48□□□□□ -1.85
Smarcd1-201ENSMUST00000023759 Gm11559Q9D3H7 191 aa3.41□□□□□ -1.86
Smarcd1-201ENSMUST00000023759 NebE9Q1W3 7152 aa3.41□□□□□ -1.86
Smarcd1-201ENSMUST00000023759 Gm4553A0A1B0GSA9 284 aa3.39□□□□□ -1.87
Smarcd1-201ENSMUST00000023759 Gm45337A0A1B0GS71 263 aa3.38□□□□□ -1.87
Smarcd1-201ENSMUST00000023759 Gm2431E9Q8S1 172 aa3.37□□□□□ -1.87
Smarcd1-201ENSMUST00000023759 Gm11639A0A1D5RLM8 5808 aa3.34□□□□□ -1.87
Smarcd1-201ENSMUST00000023759 1110025L11RikO09048 78 aa3.27□□□□□ -1.89
Smarcd1-201ENSMUST00000023759 Krtap6-5Q925H3 78 aa3.27□□□□□ -1.89
Smarcd1-201ENSMUST00000023759 Gm40460A0A1B0GR10 244 aa3.26□□□□□ -1.89
Smarcd1-201ENSMUST00000023759 Gm7579A0A1B0GRJ4 243 aa3.26□□□□□ -1.89
Smarcd1-201ENSMUST00000023759 Krtap5-5Q2TA51 241 aa3.26□□□□□ -1.89
Smarcd1-201ENSMUST00000023759 Krtap5-4Q62220 223 aa3.26□□□□□ -1.89
Smarcd1-201ENSMUST00000023759 Gm39115A0A1B0GSH7 232 aa3.08□□□□□ -1.92
Smarcd1-201ENSMUST00000023759 AhnakE9Q616 5656 aaKnown RBP3.04□□□□□ -1.92
Smarcd1-201ENSMUST00000023759 Gpr98Q8VHN7 6298 aaKnown RBP2.99□□□□□ -1.93
Smarcd1-201ENSMUST00000023759 A030005K14RikA0A1Y7VNY1 122 aa2.94□□□□□ -1.94
Smarcd1-201ENSMUST00000023759 Krtap28-13A0A087WQP5 138 aa2.93□□□□□ -1.94
Smarcd1-201ENSMUST00000023759 Gm45618A0A1B0GSA0 219 aa2.92□□□□□ -1.94
Smarcd1-201ENSMUST00000023759 Gm10229O08631 77 aa2.9□□□□□ -1.94
Smarcd1-201ENSMUST00000023759 Sprr2bO70554 98 aa2.9□□□□□ -1.95
Smarcd1-201ENSMUST00000023759 A0A1Y7VJ07 166 aa2.89□□□□□ -1.95
Smarcd1-201ENSMUST00000023759 Phgr1Q8K0G7 91 aa2.84□□□□□ -1.95
Smarcd1-201ENSMUST00000023759 Krtap28-10A0A1Y7VP58 119 aa2.84□□□□□ -1.96
Smarcd1-201ENSMUST00000023759 Gm11567Q9D141 195 aa2.77□□□□□ -1.97
Smarcd1-201ENSMUST00000023759 A030014E15RikA0A1Y7VJV2 120 aa2.72□□□□□ -1.97
Smarcd1-201ENSMUST00000023759 A0A286YCP9 139 aa2.69□□□□□ -1.98
Smarcd1-201ENSMUST00000023759 Krtap21-1Q925H4 128 aa2.69□□□□□ -1.98
Smarcd1-201ENSMUST00000023759 Gm7544A0A1Y7VJ58 118 aa2.61□□□□□ -1.99
Smarcd1-201ENSMUST00000023759 Gm29735A0A1B0GT06 219 aa2.47□□□□□ -2.01
Smarcd1-201ENSMUST00000023759 Krtap6-2O08884 159 aa2.43□□□□□ -2.02
Smarcd1-201ENSMUST00000023759 A030003K21RikA0A1Y7VIM3 128 aa2.03□□□□□ -2.08
Smarcd1-201ENSMUST00000023759 Gm6217A0A1Y7VJK9 128 aa1.97□□□□□ -2.09
Smarcd1-201ENSMUST00000023759 Krtap5-1Q64507 230 aa1.73□□□□□ -2.13
Smarcd1-201ENSMUST00000023759 Gm4559A4IF42 199 aa1.44□□□□□ -2.18
Retrieved 80 of 22,080 RNA–protein pairs in 114.2 ms