RNA–Protein interactions for RNA: ENSMUST00000018531.11

Shroom1-201, Transcript of Protein Shroom1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Shroom1, Length 2,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1-201ENSMUST00000018531 Krtap31-1Q9D644 177 aa4.58□□□□□ -1.68
Shroom1-201ENSMUST00000018531 Krtap4-7Q9D732 168 aa4.58□□□□□ -1.68
Shroom1-201ENSMUST00000018531 Gm10272F7CZ33 110 aa4.57□□□□□ -1.68
Shroom1-201ENSMUST00000018531 Gm11938Q9D3H4 131 aa4.53□□□□□ -1.68
Shroom1-201ENSMUST00000018531 Lce1lQ9D1G7 135 aa4.51□□□□□ -1.69
Shroom1-201ENSMUST00000018531 Sprr2dO70555 85 aa4.46□□□□□ -1.7
Shroom1-201ENSMUST00000018531 A0A1Y7VJH8 109 aa4.42□□□□□ -1.7
Shroom1-201ENSMUST00000018531 Lce1cQ9D1C5 147 aa4.39□□□□□ -1.71
Shroom1-201ENSMUST00000018531 Lce3bQ9CQM7 98 aa4.36□□□□□ -1.71
Shroom1-201ENSMUST00000018531 Krtap20-2E9Q0A8 60 aa4.35□□□□□ -1.71
Shroom1-201ENSMUST00000018531 Krtap5-2Q9D5Z7 189 aa4.34□□□□□ -1.71
Shroom1-201ENSMUST00000018531 Sprr2iO70560 76 aa4.31□□□□□ -1.72
Shroom1-201ENSMUST00000018531 Krtap31-2Q8CAY5 177 aa4.31□□□□□ -1.72
Shroom1-201ENSMUST00000018531 Lce1a1Q9CQH5 143 aa4.28□□□□□ -1.72
Shroom1-201ENSMUST00000018531 Syne1Q6ZWR6 8799 aa4.25□□□□□ -1.73
Shroom1-201ENSMUST00000018531 Lce1kJ3QP15 125 aa4.25□□□□□ -1.73
Shroom1-201ENSMUST00000018531 Lce1fB9EJP6 147 aa4.22□□□□□ -1.73
Shroom1-201ENSMUST00000018531 Gm10100J3QK64 120 aa4.2□□□□□ -1.74
Shroom1-201ENSMUST00000018531 Krtap19-4Q925H7 84 aa4.17□□□□□ -1.74
Shroom1-201ENSMUST00000018531 Gm11568A2A4M2 211 aa4.17□□□□□ -1.74
Shroom1-201ENSMUST00000018531 Krtap9-1Q64526 186 aa4.17□□□□□ -1.74
Shroom1-201ENSMUST00000018531 Gm10142J3KMP7 120 aa4.13□□□□□ -1.75
Shroom1-201ENSMUST00000018531 Gm11559Q9D3H7 191 aa4.1□□□□□ -1.75
Shroom1-201ENSMUST00000018531 Gm4553A0A1B0GSA9 284 aa4.09□□□□□ -1.75
Shroom1-201ENSMUST00000018531 Mt1P02802 61 aaKnown RBP4.06□□□□□ -1.76
Shroom1-201ENSMUST00000018531 Lce3cQ91V05 98 aa4.02□□□□□ -1.77
Shroom1-201ENSMUST00000018531 Gm45337A0A1B0GS71 263 aa4□□□□□ -1.77
Shroom1-201ENSMUST00000018531 A030005L19RikA0A1Y7VIU2 113 aa3.99□□□□□ -1.77
Shroom1-201ENSMUST00000018531 Lce3dE9Q8V1 98 aa3.98□□□□□ -1.77
Shroom1-201ENSMUST00000018531 Gm10153A0A1B0GRL1 320 aa3.97□□□□□ -1.77
Shroom1-201ENSMUST00000018531 Lce3eF8VQJ0 98 aa3.95□□□□□ -1.78
Shroom1-201ENSMUST00000018531 Sprr2fO70557 76 aa3.95□□□□□ -1.78
Shroom1-201ENSMUST00000018531 Lce3fQ6PAI4 98 aa3.95□□□□□ -1.78
Shroom1-201ENSMUST00000018531 Sprr2hO70559 108 aa3.94□□□□□ -1.78
Shroom1-201ENSMUST00000018531 Sprr2eO70556 76 aa3.93□□□□□ -1.78
Shroom1-201ENSMUST00000018531 Gm2431E9Q8S1 172 aa3.92□□□□□ -1.78
Shroom1-201ENSMUST00000018531 Gm40460A0A1B0GR10 244 aa3.88□□□□□ -1.79
Shroom1-201ENSMUST00000018531 Gm7579A0A1B0GRJ4 243 aa3.88□□□□□ -1.79
Shroom1-201ENSMUST00000018531 Krtap5-5Q2TA51 241 aa3.88□□□□□ -1.79
Shroom1-201ENSMUST00000018531 Krtap5-4Q62220 223 aa3.88□□□□□ -1.79
Shroom1-201ENSMUST00000018531 ObscnA2AAJ9 8891 aaKnown RBP3.87□□□□□ -1.79
Shroom1-201ENSMUST00000018531 Gm11554B1AQB2 190 aa3.86□□□□□ -1.79
Shroom1-201ENSMUST00000018531 Lce3aQ497I5 98 aa3.83□□□□□ -1.8
Shroom1-201ENSMUST00000018531 Kmt2dQ6PDK2 5588 aa3.8□□□□□ -1.8
Shroom1-201ENSMUST00000018531 Krtap4-16Q91W93 202 aa3.78□□□□□ -1.8
Shroom1-201ENSMUST00000018531 Eppk1Q8R0W0 6548 aa3.76□□□□□ -1.81
Shroom1-201ENSMUST00000018531 Gm39115A0A1B0GSH7 232 aa3.73□□□□□ -1.81
Shroom1-201ENSMUST00000018531 Mt3P28184 68 aa3.72□□□□□ -1.81
Shroom1-201ENSMUST00000018531 A0A1Y7VLE6 161 aa3.7□□□□□ -1.82
Shroom1-201ENSMUST00000018531 Macf1Q9QXZ0 7354 aaKnown RBP3.67□□□□□ -1.82
Shroom1-201ENSMUST00000018531 Hmcn1D3YXG0 5634 aa3.63□□□□□ -1.83
Shroom1-201ENSMUST00000018531 Muc16A0A140LJ72 8478 aa3.45□□□□□ -1.86
Shroom1-201ENSMUST00000018531 Gm11639A0A1D5RLM8 5808 aa3.42□□□□□ -1.86
Shroom1-201ENSMUST00000018531 Gm45618A0A1B0GSA0 219 aa3.4□□□□□ -1.87
Shroom1-201ENSMUST00000018531 Muc19Q6PZE0 7524 aa3.36□□□□□ -1.87
Shroom1-201ENSMUST00000018531 Gm10024A0A0A0MQA4 119 aa3.35□□□□□ -1.87
Shroom1-201ENSMUST00000018531 Krtap28-10A0A1Y7VP58 119 aa3.33□□□□□ -1.88
Shroom1-201ENSMUST00000018531 DstQ91ZU6 7393 aaKnown RBP3.32□□□□□ -1.88
Shroom1-201ENSMUST00000018531 AhnakE9Q616 5656 aaKnown RBP3.21□□□□□ -1.9
Shroom1-201ENSMUST00000018531 Gpr98Q8VHN7 6298 aaKnown RBP3.16□□□□□ -1.9
Shroom1-201ENSMUST00000018531 Gm7544A0A1Y7VJ58 118 aa3.13□□□□□ -1.91
Shroom1-201ENSMUST00000018531 Krtap28-13A0A087WQP5 138 aa3.07□□□□□ -1.92
Shroom1-201ENSMUST00000018531 A030005K14RikA0A1Y7VNY1 122 aa3.06□□□□□ -1.92
Shroom1-201ENSMUST00000018531 NebE9Q1W3 7152 aa3.06□□□□□ -1.92
Shroom1-201ENSMUST00000018531 1110025L11RikO09048 78 aa2.99□□□□□ -1.93
Shroom1-201ENSMUST00000018531 Krtap6-5Q925H3 78 aa2.99□□□□□ -1.93
Shroom1-201ENSMUST00000018531 A0A1Y7VJ07 166 aa2.98□□□□□ -1.93
Shroom1-201ENSMUST00000018531 Gm29735A0A1B0GT06 219 aa2.89□□□□□ -1.95
Shroom1-201ENSMUST00000018531 A030003K21RikA0A1Y7VIM3 128 aa2.7□□□□□ -1.98
Shroom1-201ENSMUST00000018531 Gm6217A0A1Y7VJK9 128 aa2.7□□□□□ -1.98
Shroom1-201ENSMUST00000018531 Gm11567Q9D141 195 aa2.69□□□□□ -1.98
Shroom1-201ENSMUST00000018531 A0A286YCP9 139 aa2.67□□□□□ -1.98
Shroom1-201ENSMUST00000018531 Gm10229O08631 77 aa2.67□□□□□ -1.98
Shroom1-201ENSMUST00000018531 Sprr2bO70554 98 aa2.58□□□□□ -2
Shroom1-201ENSMUST00000018531 A030014E15RikA0A1Y7VJV2 120 aa2.45□□□□□ -2.02
Shroom1-201ENSMUST00000018531 Krtap21-1Q925H4 128 aa2.44□□□□□ -2.02
Shroom1-201ENSMUST00000018531 Krtap6-2O08884 159 aa2.33□□□□□ -2.04
Shroom1-201ENSMUST00000018531 Phgr1Q8K0G7 91 aa2.32□□□□□ -2.04
Shroom1-201ENSMUST00000018531 Krtap5-1Q64507 230 aa1.99□□□□□ -2.09
Shroom1-201ENSMUST00000018531 Gm4559A4IF42 199 aa1.66□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 80.9 ms