RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 SH2B1Q9NRF2 756 aaPredicted RBP20.38■□□□□ 0.85
PHGDH-234ENST00000642041 FMNL1O95466 1100 aaPredicted RBP20.37■□□□□ 0.85
PHGDH-234ENST00000642041 RBM5P52756 815 aaKnown RBP eCLIP20.37■□□□□ 0.85
PHGDH-234ENST00000642041 SPDYE2Q495Y8 402 aa20.37■□□□□ 0.85
PHGDH-234ENST00000642041 CREB3L3Q68CJ9 461 aa20.37■□□□□ 0.85
PHGDH-234ENST00000642041 ZNF70Q9UC06 446 aaPredicted RBP20.37■□□□□ 0.85
PHGDH-234ENST00000642041 MCAMP43121 646 aa20.36■□□□□ 0.85
PHGDH-234ENST00000642041 ZAP70P43403 619 aa20.36■□□□□ 0.85
PHGDH-234ENST00000642041 SLC4A3P48751 1232 aa20.36■□□□□ 0.85
PHGDH-234ENST00000642041 SNAPC2Q13487 334 aa20.36■□□□□ 0.85
PHGDH-234ENST00000642041 ZNF804AQ7Z570 1209 aa20.36■□□□□ 0.85
PHGDH-234ENST00000642041 ERO1BQ86YB8 467 aa20.36■□□□□ 0.85
PHGDH-234ENST00000642041 CDAN1Q8IWY9 1227 aa20.36■□□□□ 0.85
PHGDH-234ENST00000642041 UNC93B1Q9H1C4 597 aa20.36■□□□□ 0.85
PHGDH-234ENST00000642041 ANTXR1Q9H6X2 564 aa20.36■□□□□ 0.85
PHGDH-234ENST00000642041 CPA4Q9UI42 421 aa20.36■□□□□ 0.85
PHGDH-234ENST00000642041 NT5C2P49902 561 aa20.35■□□□□ 0.85
PHGDH-234ENST00000642041 BLOC1S2Q6QNY1 142 aa20.35■□□□□ 0.85
PHGDH-234ENST00000642041 RUFY3Q7L099 469 aa20.35■□□□□ 0.85
PHGDH-234ENST00000642041 CERS3Q8IU89 383 aa20.35■□□□□ 0.85
PHGDH-234ENST00000642041 SLAIN1Q8ND83 568 aa20.35■□□□□ 0.85
PHGDH-234ENST00000642041 LIMCH1Q9UPQ0 1083 aa20.35■□□□□ 0.85
PHGDH-234ENST00000642041 SNAP23O00161 211 aa20.34■□□□□ 0.85
PHGDH-234ENST00000642041 IRF6O14896 467 aa20.34■□□□□ 0.85
PHGDH-234ENST00000642041 IL1R1P14778 569 aa20.34■□□□□ 0.85
PHGDH-234ENST00000642041 ADD2P35612 726 aa20.34■□□□□ 0.85
PHGDH-234ENST00000642041 PHKA1P46020 1223 aa20.34■□□□□ 0.85
PHGDH-234ENST00000642041 BCAMP50895 628 aa20.34■□□□□ 0.85
PHGDH-234ENST00000642041 SPTY2D1Q68D10 685 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-234ENST00000642041 PRDM6Q9NQX0 595 aa20.34■□□□□ 0.85
PHGDH-234ENST00000642041 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-234ENST00000642041 IRS2Q9Y4H2 1338 aa20.33■□□□□ 0.85
PHGDH-234ENST00000642041 SLC27A2O14975 620 aa20.33■□□□□ 0.85
PHGDH-234ENST00000642041 TFRCP02786 760 aaKnown RBP20.33■□□□□ 0.85
PHGDH-234ENST00000642041 HIBADHP31937 336 aaKnown RBP20.33■□□□□ 0.85
PHGDH-234ENST00000642041 PTH1RQ03431 593 aa20.33■□□□□ 0.85
PHGDH-234ENST00000642041 CUL4AQ13619 759 aa20.33■□□□□ 0.85
PHGDH-234ENST00000642041 SLC9C2Q5TAH2 1124 aa20.33■□□□□ 0.85
PHGDH-234ENST00000642041 FBXO33Q7Z6M2 555 aa20.33■□□□□ 0.85
PHGDH-234ENST00000642041 SNCAIPQ9Y6H5 919 aa20.33■□□□□ 0.85
PHGDH-234ENST00000642041 ZMYM6O95789 1325 aa20.32■□□□□ 0.84
PHGDH-234ENST00000642041 MYH7P12883 1935 aa20.32■□□□□ 0.84
PHGDH-234ENST00000642041 ALPK3Q96L96 1907 aa20.32■□□□□ 0.84
PHGDH-234ENST00000642041 SPTBN5Q9NRC6 3674 aaKnown RBP20.32■□□□□ 0.84
PHGDH-234ENST00000642041 CYP2E1P05181 493 aaPredicted RBP20.32■□□□□ 0.84
PHGDH-234ENST00000642041 PRKCZQ05513 592 aa20.32■□□□□ 0.84
PHGDH-234ENST00000642041 PPIL2Q13356 520 aa20.32■□□□□ 0.84
PHGDH-234ENST00000642041 IMMTQ16891 758 aaKnown RBP20.32■□□□□ 0.84
PHGDH-234ENST00000642041 TMEM39BQ9GZU3 492 aa20.32■□□□□ 0.84
PHGDH-234ENST00000642041 TDRD3Q9H7E2 651 aaKnown RBP20.32■□□□□ 0.84
PHGDH-234ENST00000642041 PDRG1Q9NUG6 133 aa20.32■□□□□ 0.84
PHGDH-234ENST00000642041 ADGRA2Q96PE1 1338 aa20.31■□□□□ 0.84
PHGDH-234ENST00000642041 GYG1P46976 350 aa20.31■□□□□ 0.84
PHGDH-234ENST00000642041 TNNI2P48788 182 aa20.31■□□□□ 0.84
PHGDH-234ENST00000642041 ALX1Q15699 326 aa20.31■□□□□ 0.84
PHGDH-234ENST00000642041 TDHQ8IZJ6 230 aa20.31■□□□□ 0.84
PHGDH-234ENST00000642041 EDC3Q96F86 508 aaKnown RBP20.31■□□□□ 0.84
PHGDH-234ENST00000642041 FAM84BQ96KN1 310 aaPredicted RBP20.31■□□□□ 0.84
PHGDH-234ENST00000642041 JAKMIP1Q96N16 626 aaKnown RBP20.31■□□□□ 0.84
PHGDH-234ENST00000642041 GBP4Q96PP9 640 aa20.31■□□□□ 0.84
PHGDH-234ENST00000642041 NEK1Q96PY6 1258 aa20.31■□□□□ 0.84
PHGDH-234ENST00000642041 NACAP1Q9BZK3 213 aa20.31■□□□□ 0.84
PHGDH-234ENST00000642041 IL25Q9H293 177 aa20.31■□□□□ 0.84
PHGDH-234ENST00000642041 TCP10L2B9ZVM9 353 aa20.3■□□□□ 0.84
PHGDH-234ENST00000642041 HSPD1P10809 573 aaKnown RBP20.3■□□□□ 0.84
PHGDH-234ENST00000642041 CASTP20810 708 aaKnown RBP20.3■□□□□ 0.84
PHGDH-234ENST00000642041 ANKRD23Q86SG2 305 aa20.3■□□□□ 0.84
PHGDH-234ENST00000642041 PAWRQ96IZ0 340 aaKnown RBP20.3■□□□□ 0.84
PHGDH-234ENST00000642041 LRP2BPQ9P2M1 347 aa20.3■□□□□ 0.84
PHGDH-234ENST00000642041 SERPINA10Q9UK55 444 aa20.3■□□□□ 0.84
PHGDH-234ENST00000642041 PALD1Q9ULE6 856 aa20.3■□□□□ 0.84
PHGDH-234ENST00000642041 FRAT2O75474 233 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-234ENST00000642041 IDH1O75874 414 aaKnown RBP20.29■□□□□ 0.84
PHGDH-234ENST00000642041 DDIT3P35638 169 aa20.29■□□□□ 0.84
PHGDH-234ENST00000642041 FCGRTP55899 365 aa20.29■□□□□ 0.84
PHGDH-234ENST00000642041 RASGRF1Q13972 1273 aa20.29■□□□□ 0.84
PHGDH-234ENST00000642041 NECAB2Q7Z6G3 386 aa20.29■□□□□ 0.84
PHGDH-234ENST00000642041 ZNF589Q86UQ0 364 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-234ENST00000642041 FBXL16Q8N461 479 aa20.29■□□□□ 0.84
PHGDH-234ENST00000642041 WDR66Q8TBY9 1149 aa20.29■□□□□ 0.84
PHGDH-234ENST00000642041 TMX3Q96JJ7 454 aa20.29■□□□□ 0.84
PHGDH-234ENST00000642041 TTC14Q96N46 770 aa20.29■□□□□ 0.84
PHGDH-234ENST00000642041 DEFB118Q96PH6 123 aa20.29■□□□□ 0.84
PHGDH-234ENST00000642041 CRISPLD2Q9H0B8 497 aa20.29■□□□□ 0.84
PHGDH-234ENST00000642041 SLKQ9H2G2 1235 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-234ENST00000642041 ZMYND8Q9ULU4 1186 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-234ENST00000642041 MAST3O60307 1309 aa20.28■□□□□ 0.84
PHGDH-234ENST00000642041 WDR19Q8NEZ3 1342 aa20.28■□□□□ 0.84
PHGDH-234ENST00000642041 GOLGA6L22H0YM25 854 aa20.28■□□□□ 0.84
PHGDH-234ENST00000642041 PDHXO00330 501 aa20.28■□□□□ 0.84
PHGDH-234ENST00000642041 ADCY3O60266 1144 aa20.28■□□□□ 0.84
PHGDH-234ENST00000642041 C7orf61Q8IZ16 206 aa20.28■□□□□ 0.84
PHGDH-234ENST00000642041 ZKSCAN4Q969J2 545 aaPredicted RBP20.28■□□□□ 0.84
PHGDH-234ENST00000642041 WRNIP1Q96S55 665 aa20.28■□□□□ 0.84
PHGDH-234ENST00000642041 GABRQQ9UN88 632 aa20.28■□□□□ 0.84
PHGDH-234ENST00000642041 JAG2Q9Y219 1238 aa20.28■□□□□ 0.84
PHGDH-234ENST00000642041 RPTORQ8N122 1335 aa20.27■□□□□ 0.84
PHGDH-234ENST00000642041 MYH13Q9UKX3 1938 aa20.27■□□□□ 0.84
PHGDH-234ENST00000642041 LAMA2P24043 3122 aaKnown RBP20.27■□□□□ 0.84
PHGDH-234ENST00000642041 TTC28Q96AY4 2481 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms