RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 ANKRD1Q15327 319 aa15.24■□□□□ 0.03
PHGDH-220ENST00000641570 TSGA10IPQ3SY00 556 aa15.24■□□□□ 0.03
PHGDH-220ENST00000641570 TMEM179Q6ZVK1 233 aa15.24■□□□□ 0.03
PHGDH-220ENST00000641570 TEPSINQ96N21 525 aa15.24■□□□□ 0.03
PHGDH-220ENST00000641570 AS3MTQ9HBK9 375 aa15.24■□□□□ 0.03
PHGDH-220ENST00000641570 ISY1Q9ULR0 285 aaKnown RBP15.24■□□□□ 0.03
PHGDH-220ENST00000641570 CCDC69A6NI79 296 aa15.23■□□□□ 0.03
PHGDH-220ENST00000641570 TRAF5O00463 557 aa15.23■□□□□ 0.03
PHGDH-220ENST00000641570 PRC1O43663 620 aa15.23■□□□□ 0.03
PHGDH-220ENST00000641570 RAD21O60216 631 aa15.23■□□□□ 0.03
PHGDH-220ENST00000641570 CTNND1O60716 968 aaKnown RBP15.23■□□□□ 0.03
PHGDH-220ENST00000641570 FSTL1Q12841 308 aa15.23■□□□□ 0.03
PHGDH-220ENST00000641570 TMEM67Q5HYA8 995 aa15.23■□□□□ 0.03
PHGDH-220ENST00000641570 FAM47AQ5JRC9 791 aa15.23■□□□□ 0.03
PHGDH-220ENST00000641570 DHX32Q7L7V1 743 aaKnown RBP15.23■□□□□ 0.03
PHGDH-220ENST00000641570 RASEFQ8IZ41 740 aa15.23■□□□□ 0.03
PHGDH-220ENST00000641570 FEZ1Q99689 392 aa15.23■□□□□ 0.03
PHGDH-220ENST00000641570 TM6SF1Q9BZW5 370 aa15.23■□□□□ 0.03
PHGDH-220ENST00000641570 ARHGEF10LQ9HCE6 1279 aa15.23■□□□□ 0.03
PHGDH-220ENST00000641570 GBA2Q9HCG7 927 aaPredicted RBP15.23■□□□□ 0.03
PHGDH-220ENST00000641570 PDRG1Q9NUG6 133 aa15.23■□□□□ 0.03
PHGDH-220ENST00000641570 STX8Q9UNK0 236 aa15.23■□□□□ 0.03
PHGDH-220ENST00000641570 LAMB1P07942 1786 aa15.23■□□□□ 0.03
PHGDH-220ENST00000641570 MYH1P12882 1939 aa15.22■□□□□ 0.03
PHGDH-220ENST00000641570 KIF3CO14782 793 aa15.22■□□□□ 0.03
PHGDH-220ENST00000641570 RASA1P20936 1047 aa15.22■□□□□ 0.03
PHGDH-220ENST00000641570 SHMT1P34896 483 aa15.22■□□□□ 0.03
PHGDH-220ENST00000641570 ANP32AP39687 249 aaKnown RBP15.22■□□□□ 0.03
PHGDH-220ENST00000641570 NEK4P51957 841 aa15.22■□□□□ 0.03
PHGDH-220ENST00000641570 MAP3K9P80192 1104 aa15.22■□□□□ 0.03
PHGDH-220ENST00000641570 ICA1Q05084 483 aa15.22■□□□□ 0.03
PHGDH-220ENST00000641570 GABPAQ06546 454 aa15.22■□□□□ 0.03
PHGDH-220ENST00000641570 WTAPQ15007 396 aa15.22■□□□□ 0.03
PHGDH-220ENST00000641570 IFIT1BQ5T764 474 aaKnown RBP15.22■□□□□ 0.03
PHGDH-220ENST00000641570 TATDN1Q6P1N9 297 aa15.22■□□□□ 0.03
PHGDH-220ENST00000641570 RUFY3Q7L099 469 aa15.22■□□□□ 0.03
PHGDH-220ENST00000641570 ANKRD13AQ8IZ07 590 aa15.22■□□□□ 0.03
PHGDH-220ENST00000641570 KCNB2Q92953 911 aa15.22■□□□□ 0.03
PHGDH-220ENST00000641570 TMEM87BQ96K49 555 aa15.22■□□□□ 0.03
PHGDH-220ENST00000641570 KAT14Q9H8E8 782 aa15.22■□□□□ 0.03
PHGDH-220ENST00000641570 DAXXQ9UER7 740 aaPredicted RBP15.22■□□□□ 0.03
PHGDH-220ENST00000641570 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.22■□□□□ 0.03
PHGDH-220ENST00000641570 FOCADQ5VW36 1801 aa15.22■□□□□ 0.03
PHGDH-220ENST00000641570 GH2P01242 217 aa15.21■□□□□ 0.03
PHGDH-220ENST00000641570 RPS6KB1P23443 525 aa15.21■□□□□ 0.03
PHGDH-220ENST00000641570 METTL16Q86W50 562 aaKnown RBP15.21■□□□□ 0.03
PHGDH-220ENST00000641570 CDAN1Q8IWY9 1227 aa15.21■□□□□ 0.03
PHGDH-220ENST00000641570 SCYL3Q8IZE3 742 aa15.21■□□□□ 0.03
PHGDH-220ENST00000641570 TMTC2Q8N394 836 aa15.21■□□□□ 0.03
PHGDH-220ENST00000641570 ZSCAN10Q96SZ4 725 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-220ENST00000641570 TBC1D2Q9BYX2 928 aa15.21■□□□□ 0.03
PHGDH-220ENST00000641570 UPF3BQ9BZI7 483 aaKnown RBP15.21■□□□□ 0.03
PHGDH-220ENST00000641570 KANSL2Q9H9L4 492 aa15.21■□□□□ 0.03
PHGDH-220ENST00000641570 ZBTB21Q9ULJ3 1066 aa15.21■□□□□ 0.03
PHGDH-220ENST00000641570 ABT1Q9ULW3 272 aaKnown RBP15.21■□□□□ 0.03
PHGDH-220ENST00000641570 DDX60LQ5H9U9 1706 aaKnown RBP15.2■□□□□ 0.02
PHGDH-220ENST00000641570 TNKSO95271 1327 aa15.2■□□□□ 0.02
PHGDH-220ENST00000641570 WDR19Q8NEZ3 1342 aa15.2■□□□□ 0.02
PHGDH-220ENST00000641570 BAZ2AQ9UIF9 1905 aaKnown RBP15.2■□□□□ 0.02
PHGDH-220ENST00000641570 TTLL1O95922 423 aa15.2■□□□□ 0.02
PHGDH-220ENST00000641570 AKR1B1P15121 316 aa15.2■□□□□ 0.02
PHGDH-220ENST00000641570 CAP2P40123 477 aa15.2■□□□□ 0.02
PHGDH-220ENST00000641570 ADCK5Q3MIX3 580 aa15.2■□□□□ 0.02
PHGDH-220ENST00000641570 PAXIP1Q6ZW49 1069 aaPredicted RBP15.2■□□□□ 0.02
PHGDH-220ENST00000641570 CATIPQ7Z7H3 387 aa15.2■□□□□ 0.02
PHGDH-220ENST00000641570 HSCBQ8IWL3 235 aa15.2■□□□□ 0.02
PHGDH-220ENST00000641570 NEDD1Q8NHV4 660 aa15.2■□□□□ 0.02
PHGDH-220ENST00000641570 MTA3Q9BTC8 594 aa15.2■□□□□ 0.02
PHGDH-220ENST00000641570 NBPF3Q9H094 633 aa15.2■□□□□ 0.02
PHGDH-220ENST00000641570 UNCXA6NJT0 531 aa15.19■□□□□ 0.02
PHGDH-220ENST00000641570 USP17L5A8MUK1 530 aa15.19■□□□□ 0.02
PHGDH-220ENST00000641570 FGRP09769 529 aa15.19■□□□□ 0.02
PHGDH-220ENST00000641570 MCM2P49736 904 aa15.19■□□□□ 0.02
PHGDH-220ENST00000641570 EVX2Q03828 476 aa15.19■□□□□ 0.02
PHGDH-220ENST00000641570 STOX1Q6ZVD7 989 aa15.19■□□□□ 0.02
PHGDH-220ENST00000641570 CHST3Q7LGC8 479 aa15.19■□□□□ 0.02
PHGDH-220ENST00000641570 MB21D2Q8IYB1 491 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-220ENST00000641570 CHMP4CQ96CF2 233 aa15.19■□□□□ 0.02
PHGDH-220ENST00000641570 KLRG1Q96E93 195 aa15.19■□□□□ 0.02
PHGDH-220ENST00000641570 ZKSCAN3Q9BRR0 538 aa15.19■□□□□ 0.02
PHGDH-220ENST00000641570 DNAJC18Q9H819 358 aa15.19■□□□□ 0.02
PHGDH-220ENST00000641570 ZSWIM6Q9HCJ5 1215 aa15.19■□□□□ 0.02
PHGDH-220ENST00000641570 GOPCQ9HD26 462 aa15.19■□□□□ 0.02
PHGDH-220ENST00000641570 INCENPQ9NQS7 918 aa15.19■□□□□ 0.02
PHGDH-220ENST00000641570 ZSWIM5Q9P217 1185 aa15.19■□□□□ 0.02
PHGDH-220ENST00000641570 LAMA4Q16363 1823 aa15.19■□□□□ 0.02
PHGDH-220ENST00000641570 BECN1Q14457 450 aa15.18■□□□□ 0.02
PHGDH-220ENST00000641570 Q6ZUG5 572 aa15.18■□□□□ 0.02
PHGDH-220ENST00000641570 NOL8Q76FK4 1167 aaKnown RBP15.18■□□□□ 0.02
PHGDH-220ENST00000641570 ZKSCAN4Q969J2 545 aaPredicted RBP15.18■□□□□ 0.02
PHGDH-220ENST00000641570 SLC10A4Q96EP9 437 aa15.18■□□□□ 0.02
PHGDH-220ENST00000641570 ELP3Q9H9T3 547 aa15.18■□□□□ 0.02
PHGDH-220ENST00000641570 TCP11L1Q9NUJ3 509 aa15.18■□□□□ 0.02
PHGDH-220ENST00000641570 SLC12A7Q9Y666 1083 aa15.18■□□□□ 0.02
PHGDH-220ENST00000641570 CDK5RAP2Q96SN8 1893 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 PLIN4Q96Q06 1357 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 TMEM88BA6NKF7 163 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 SMIM22K7EJ46 135 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 USP2O75604 605 aaPredicted RBP15.17■□□□□ 0.02
PHGDH-220ENST00000641570 HSP90AA1P07900 732 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms