RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 TBC1D12O60347 775 aa15.27■□□□□ 0.04
PHGDH-218ENST00000641491 MCM5P33992 734 aa15.27■□□□□ 0.04
PHGDH-218ENST00000641491 DEFB115Q30KQ5 88 aa15.27■□□□□ 0.04
PHGDH-218ENST00000641491 PRAMEF18Q5VWM3 479 aa15.27■□□□□ 0.04
PHGDH-218ENST00000641491 TBC1D10CQ8IV04 446 aa15.27■□□□□ 0.04
PHGDH-218ENST00000641491 C2orf69Q8N8R5 385 aa15.27■□□□□ 0.04
PHGDH-218ENST00000641491 TBC1D32Q96NH3 1257 aa15.27■□□□□ 0.04
PHGDH-218ENST00000641491 WRNIP1Q96S55 665 aa15.27■□□□□ 0.04
PHGDH-218ENST00000641491 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.27■□□□□ 0.04
PHGDH-218ENST00000641491 SNX14Q9Y5W7 946 aa15.27■□□□□ 0.04
PHGDH-218ENST00000641491 ECM29Q5VYK3 1845 aa15.27■□□□□ 0.03
PHGDH-218ENST00000641491 ORC4O43929 436 aa15.26■□□□□ 0.03
PHGDH-218ENST00000641491 CELF2O95319 508 aaKnown RBP15.26■□□□□ 0.03
PHGDH-218ENST00000641491 RBM25P49756 843 aaKnown RBP15.26■□□□□ 0.03
PHGDH-218ENST00000641491 RABEP1Q15276 862 aa15.26■□□□□ 0.03
PHGDH-218ENST00000641491 ABCB5Q2M3G0 1257 aa15.26■□□□□ 0.03
PHGDH-218ENST00000641491 IL27Q8NEV9 243 aa15.26■□□□□ 0.03
PHGDH-218ENST00000641491 NEDD4P46934 1319 aa15.25■□□□□ 0.03
PHGDH-218ENST00000641491 FAM196BA6NMK8 535 aa15.25■□□□□ 0.03
PHGDH-218ENST00000641491 B4E1Z4 1266 aa15.25■□□□□ 0.03
PHGDH-218ENST00000641491 KDM4AO75164 1064 aa15.25■□□□□ 0.03
PHGDH-218ENST00000641491 TFAP4Q01664 338 aa15.25■□□□□ 0.03
PHGDH-218ENST00000641491 ATP2B2Q01814 1243 aa15.25■□□□□ 0.03
PHGDH-218ENST00000641491 RAB3GAP1Q15042 981 aa15.25■□□□□ 0.03
PHGDH-218ENST00000641491 SYNE3Q6ZMZ3 975 aa15.25■□□□□ 0.03
PHGDH-218ENST00000641491 NFXL1Q6ZNB6 911 aa15.25■□□□□ 0.03
PHGDH-218ENST00000641491 SH3BP5LQ7L8J4 393 aa15.25■□□□□ 0.03
PHGDH-218ENST00000641491 SLC44A5Q8NCS7 719 aa15.25■□□□□ 0.03
PHGDH-218ENST00000641491 SH2D4AQ9H788 454 aa15.25■□□□□ 0.03
PHGDH-218ENST00000641491 GINM1Q9NU53 330 aa15.25■□□□□ 0.03
PHGDH-218ENST00000641491 NAP1L2Q9ULW6 460 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-218ENST00000641491 ANGEL1Q9UNK9 670 aaKnown RBP15.25■□□□□ 0.03
PHGDH-218ENST00000641491 WDR33Q9C0J8 1336 aaKnown RBP15.24■□□□□ 0.03
PHGDH-218ENST00000641491 CCDC85CA6NKD9 419 aa15.24■□□□□ 0.03
PHGDH-218ENST00000641491 IFIT3O14879 490 aaKnown RBP15.24■□□□□ 0.03
PHGDH-218ENST00000641491 GDF11O95390 407 aa15.24■□□□□ 0.03
PHGDH-218ENST00000641491 ASNSP08243 561 aa15.24■□□□□ 0.03
PHGDH-218ENST00000641491 FKBP1BP68106 108 aa15.24■□□□□ 0.03
PHGDH-218ENST00000641491 ANKRD1Q15327 319 aa15.24■□□□□ 0.03
PHGDH-218ENST00000641491 TSGA10IPQ3SY00 556 aa15.24■□□□□ 0.03
PHGDH-218ENST00000641491 TMEM179Q6ZVK1 233 aa15.24■□□□□ 0.03
PHGDH-218ENST00000641491 TEPSINQ96N21 525 aa15.24■□□□□ 0.03
PHGDH-218ENST00000641491 AS3MTQ9HBK9 375 aa15.24■□□□□ 0.03
PHGDH-218ENST00000641491 ISY1Q9ULR0 285 aaKnown RBP15.24■□□□□ 0.03
PHGDH-218ENST00000641491 CCDC69A6NI79 296 aa15.23■□□□□ 0.03
PHGDH-218ENST00000641491 TRAF5O00463 557 aa15.23■□□□□ 0.03
PHGDH-218ENST00000641491 PRC1O43663 620 aa15.23■□□□□ 0.03
PHGDH-218ENST00000641491 RAD21O60216 631 aa15.23■□□□□ 0.03
PHGDH-218ENST00000641491 CTNND1O60716 968 aaKnown RBP15.23■□□□□ 0.03
PHGDH-218ENST00000641491 TMEM67Q5HYA8 995 aa15.23■□□□□ 0.03
PHGDH-218ENST00000641491 FAM47AQ5JRC9 791 aa15.23■□□□□ 0.03
PHGDH-218ENST00000641491 DHX32Q7L7V1 743 aaKnown RBP15.23■□□□□ 0.03
PHGDH-218ENST00000641491 RASEFQ8IZ41 740 aa15.23■□□□□ 0.03
PHGDH-218ENST00000641491 FEZ1Q99689 392 aa15.23■□□□□ 0.03
PHGDH-218ENST00000641491 TM6SF1Q9BZW5 370 aa15.23■□□□□ 0.03
PHGDH-218ENST00000641491 ARHGEF10LQ9HCE6 1279 aa15.23■□□□□ 0.03
PHGDH-218ENST00000641491 GBA2Q9HCG7 927 aaPredicted RBP15.23■□□□□ 0.03
PHGDH-218ENST00000641491 PDRG1Q9NUG6 133 aa15.23■□□□□ 0.03
PHGDH-218ENST00000641491 STX8Q9UNK0 236 aa15.23■□□□□ 0.03
PHGDH-218ENST00000641491 LAMB1P07942 1786 aa15.23■□□□□ 0.03
PHGDH-218ENST00000641491 MYH1P12882 1939 aa15.22■□□□□ 0.03
PHGDH-218ENST00000641491 RASA1P20936 1047 aa15.22■□□□□ 0.03
PHGDH-218ENST00000641491 SHMT1P34896 483 aa15.22■□□□□ 0.03
PHGDH-218ENST00000641491 ANP32AP39687 249 aaKnown RBP15.22■□□□□ 0.03
PHGDH-218ENST00000641491 NEK4P51957 841 aa15.22■□□□□ 0.03
PHGDH-218ENST00000641491 MAP3K9P80192 1104 aa15.22■□□□□ 0.03
PHGDH-218ENST00000641491 ICA1Q05084 483 aa15.22■□□□□ 0.03
PHGDH-218ENST00000641491 GABPAQ06546 454 aa15.22■□□□□ 0.03
PHGDH-218ENST00000641491 WTAPQ15007 396 aa15.22■□□□□ 0.03
PHGDH-218ENST00000641491 IFIT1BQ5T764 474 aaKnown RBP15.22■□□□□ 0.03
PHGDH-218ENST00000641491 TATDN1Q6P1N9 297 aa15.22■□□□□ 0.03
PHGDH-218ENST00000641491 RUFY3Q7L099 469 aa15.22■□□□□ 0.03
PHGDH-218ENST00000641491 ANKRD13AQ8IZ07 590 aa15.22■□□□□ 0.03
PHGDH-218ENST00000641491 KCNB2Q92953 911 aa15.22■□□□□ 0.03
PHGDH-218ENST00000641491 TMEM87BQ96K49 555 aa15.22■□□□□ 0.03
PHGDH-218ENST00000641491 KAT14Q9H8E8 782 aa15.22■□□□□ 0.03
PHGDH-218ENST00000641491 DAXXQ9UER7 740 aaPredicted RBP15.22■□□□□ 0.03
PHGDH-218ENST00000641491 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.22■□□□□ 0.03
PHGDH-218ENST00000641491 FOCADQ5VW36 1801 aa15.22■□□□□ 0.03
PHGDH-218ENST00000641491 GH2P01242 217 aa15.21■□□□□ 0.03
PHGDH-218ENST00000641491 RPS6KB1P23443 525 aa15.21■□□□□ 0.03
PHGDH-218ENST00000641491 METTL16Q86W50 562 aaKnown RBP15.21■□□□□ 0.03
PHGDH-218ENST00000641491 CDAN1Q8IWY9 1227 aa15.21■□□□□ 0.03
PHGDH-218ENST00000641491 SCYL3Q8IZE3 742 aa15.21■□□□□ 0.03
PHGDH-218ENST00000641491 TMTC2Q8N394 836 aa15.21■□□□□ 0.03
PHGDH-218ENST00000641491 ZSCAN10Q96SZ4 725 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-218ENST00000641491 TBC1D2Q9BYX2 928 aa15.21■□□□□ 0.03
PHGDH-218ENST00000641491 UPF3BQ9BZI7 483 aaKnown RBP15.21■□□□□ 0.03
PHGDH-218ENST00000641491 KANSL2Q9H9L4 492 aa15.21■□□□□ 0.03
PHGDH-218ENST00000641491 ZBTB21Q9ULJ3 1066 aa15.21■□□□□ 0.03
PHGDH-218ENST00000641491 ABT1Q9ULW3 272 aaKnown RBP15.21■□□□□ 0.03
PHGDH-218ENST00000641491 DDX60LQ5H9U9 1706 aaKnown RBP15.2■□□□□ 0.02
PHGDH-218ENST00000641491 TNKSO95271 1327 aa15.2■□□□□ 0.02
PHGDH-218ENST00000641491 WDR19Q8NEZ3 1342 aa15.2■□□□□ 0.02
PHGDH-218ENST00000641491 BAZ2AQ9UIF9 1905 aaKnown RBP15.2■□□□□ 0.02
PHGDH-218ENST00000641491 TTLL1O95922 423 aa15.2■□□□□ 0.02
PHGDH-218ENST00000641491 AKR1B1P15121 316 aa15.2■□□□□ 0.02
PHGDH-218ENST00000641491 CAP2P40123 477 aa15.2■□□□□ 0.02
PHGDH-218ENST00000641491 ADCK5Q3MIX3 580 aa15.2■□□□□ 0.02
PHGDH-218ENST00000641491 PAXIP1Q6ZW49 1069 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms