RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 ZIC5Q96T25 663 aa15.71■□□□□ 0.11
GTF3A-209ENST00000640289 NBPF3Q9H094 633 aa15.71■□□□□ 0.11
GTF3A-209ENST00000640289 ANAPC4Q9UJX5 808 aa15.71■□□□□ 0.11
GTF3A-209ENST00000640289 WDR33Q9C0J8 1336 aaKnown RBP15.7■□□□□ 0.1
GTF3A-209ENST00000640289 SPDYE5A6NIY4 337 aa15.7■□□□□ 0.1
GTF3A-209ENST00000640289 GH2P01242 217 aa15.7■□□□□ 0.1
GTF3A-209ENST00000640289 AKR1B1P15121 316 aa15.7■□□□□ 0.1
GTF3A-209ENST00000640289 SPRYD7Q5W111 196 aa15.7■□□□□ 0.1
GTF3A-209ENST00000640289 KIAA1211Q6ZU35 1233 aa15.7■□□□□ 0.1
GTF3A-209ENST00000640289 TBC1D10CQ8IV04 446 aa15.7■□□□□ 0.1
GTF3A-209ENST00000640289 DNAJC5GQ8N7S2 189 aa15.7■□□□□ 0.1
GTF3A-209ENST00000640289 MAP4K1Q92918 833 aa15.7■□□□□ 0.1
GTF3A-209ENST00000640289 CCDC102AQ96A19 550 aa15.7■□□□□ 0.1
GTF3A-209ENST00000640289 OTUD5Q96G74 571 aa15.7■□□□□ 0.1
GTF3A-209ENST00000640289 MKNK2Q9HBH9 465 aa15.7■□□□□ 0.1
GTF3A-209ENST00000640289 PICK1Q9NRD5 415 aa15.7■□□□□ 0.1
GTF3A-209ENST00000640289 ZBTB21Q9ULJ3 1066 aa15.7■□□□□ 0.1
GTF3A-209ENST00000640289 MPHOSPH10O00566 681 aaKnown RBP15.69■□□□□ 0.1
GTF3A-209ENST00000640289 ZNF213O14771 459 aa15.69■□□□□ 0.1
GTF3A-209ENST00000640289 RASA1P20936 1047 aa15.69■□□□□ 0.1
GTF3A-209ENST00000640289 ECE1P42892 770 aa15.69■□□□□ 0.1
GTF3A-209ENST00000640289 ABCB5Q2M3G0 1257 aa15.69■□□□□ 0.1
GTF3A-209ENST00000640289 ERO1BQ86YB8 467 aa15.69■□□□□ 0.1
GTF3A-209ENST00000640289 CTNNA3Q9UI47 895 aa15.69■□□□□ 0.1
GTF3A-209ENST00000640289 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.69■□□□□ 0.1
GTF3A-209ENST00000640289 RBM8AQ9Y5S9 174 aaKnown RBP15.69■□□□□ 0.1
GTF3A-209ENST00000640289 ZHX2Q9Y6X8 837 aa15.69■□□□□ 0.1
GTF3A-209ENST00000640289 LAMB1P07942 1786 aa15.69■□□□□ 0.1
GTF3A-209ENST00000640289 IRF6O14896 467 aa15.68■□□□□ 0.1
GTF3A-209ENST00000640289 SLC3A2P08195 630 aaKnown RBP15.68■□□□□ 0.1
GTF3A-209ENST00000640289 GUCY1A2P33402 732 aa15.68■□□□□ 0.1
GTF3A-209ENST00000640289 PPATQ06203 517 aa15.68■□□□□ 0.1
GTF3A-209ENST00000640289 PDE4BQ07343 736 aa15.68■□□□□ 0.1
GTF3A-209ENST00000640289 SEPT2Q15019 361 aa15.68■□□□□ 0.1
GTF3A-209ENST00000640289 RAB3GAP1Q15042 981 aa15.68■□□□□ 0.1
GTF3A-209ENST00000640289 IMMTQ16891 758 aaKnown RBP15.68■□□□□ 0.1
GTF3A-209ENST00000640289 CABP5Q9NP86 173 aa15.68■□□□□ 0.1
GTF3A-209ENST00000640289 TAOK2Q9UL54 1235 aa15.68■□□□□ 0.1
GTF3A-209ENST00000640289 U3KPZ7 1027 aaPredicted RBP15.68■□□□□ 0.1
GTF3A-209ENST00000640289 ASNSP08243 561 aa15.67■□□□□ 0.1
GTF3A-209ENST00000640289 CYP21A2P08686 494 aa15.67■□□□□ 0.1
GTF3A-209ENST00000640289 ZBTB48P10074 688 aaPredicted RBP15.67■□□□□ 0.1
GTF3A-209ENST00000640289 PPIL2Q13356 520 aa15.67■□□□□ 0.1
GTF3A-209ENST00000640289 FAM47AQ5JRC9 791 aa15.67■□□□□ 0.1
GTF3A-209ENST00000640289 AKNAD1Q5T1N1 836 aa15.67■□□□□ 0.1
GTF3A-209ENST00000640289 CLEC10AQ8IUN9 316 aa15.67■□□□□ 0.1
GTF3A-209ENST00000640289 NKX2-3Q8TAU0 364 aa15.67■□□□□ 0.1
GTF3A-209ENST00000640289 STAG1Q8WVM7 1258 aa15.67■□□□□ 0.1
GTF3A-209ENST00000640289 TOMM22Q9NS69 142 aa15.67■□□□□ 0.1
GTF3A-209ENST00000640289 TAF6LQ9Y6J9 622 aa15.67■□□□□ 0.1
GTF3A-209ENST00000640289 NEDD4P46934 1319 aa15.67■□□□□ 0.1
GTF3A-209ENST00000640289 DOCK1Q14185 1865 aa15.66■□□□□ 0.1
GTF3A-209ENST00000640289 USP17L5A8MUK1 530 aa15.66■□□□□ 0.1
GTF3A-209ENST00000640289 FGRP09769 529 aa15.66■□□□□ 0.1
GTF3A-209ENST00000640289 KIF23Q02241 960 aaPredicted RBP15.66■□□□□ 0.1
GTF3A-209ENST00000640289 NOGQ13253 232 aa15.66■□□□□ 0.1
GTF3A-209ENST00000640289 RRP12Q5JTH9 1297 aaKnown RBP15.66■□□□□ 0.1
GTF3A-209ENST00000640289 ZNF444Q8N0Y2 327 aaPredicted RBP15.66■□□□□ 0.1
GTF3A-209ENST00000640289 CCDC17Q96LX7 622 aa15.66■□□□□ 0.1
GTF3A-209ENST00000640289 ZNF287Q9HBT7 754 aa15.66■□□□□ 0.1
GTF3A-209ENST00000640289 GINM1Q9NU53 330 aa15.66■□□□□ 0.1
GTF3A-209ENST00000640289 AFG3L2Q9Y4W6 797 aa15.66■□□□□ 0.1
GTF3A-209ENST00000640289 TRIM75PA6NK02 468 aa15.65■□□□□ 0.1
GTF3A-209ENST00000640289 ORC4O43929 436 aa15.65■□□□□ 0.1
GTF3A-209ENST00000640289 MFSD6Q6ZSS7 791 aa15.65■□□□□ 0.1
GTF3A-209ENST00000640289 TMEM179Q6ZVK1 233 aa15.65■□□□□ 0.1
GTF3A-209ENST00000640289 MS4A4AQ96JQ5 239 aa15.65■□□□□ 0.1
GTF3A-209ENST00000640289 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.65■□□□□ 0.1
GTF3A-209ENST00000640289 KCNH4Q9UQ05 1017 aa15.65■□□□□ 0.1
GTF3A-209ENST00000640289 SLC27A2O14975 620 aa15.64■□□□□ 0.09
GTF3A-209ENST00000640289 RANBP6O60518 1105 aaKnown RBP15.64■□□□□ 0.09
GTF3A-209ENST00000640289 TSPY3P0CV98 308 aa15.64■□□□□ 0.09
GTF3A-209ENST00000640289 TSPY8P0CW00 308 aa15.64■□□□□ 0.09
GTF3A-209ENST00000640289 TFAP4Q01664 338 aa15.64■□□□□ 0.09
GTF3A-209ENST00000640289 SPP2Q13103 211 aa15.64■□□□□ 0.09
GTF3A-209ENST00000640289 DGKZQ13574 1117 aa15.64■□□□□ 0.09
GTF3A-209ENST00000640289 NECTIN1Q15223 517 aa15.64■□□□□ 0.09
GTF3A-209ENST00000640289 CREB3L3Q68CJ9 461 aa15.64■□□□□ 0.09
GTF3A-209ENST00000640289 ZNF280CQ8ND82 737 aa15.64■□□□□ 0.09
GTF3A-209ENST00000640289 RNF41Q9H4P4 317 aaPredicted RBP15.64■□□□□ 0.09
GTF3A-209ENST00000640289 AS3MTQ9HBK9 375 aa15.64■□□□□ 0.09
GTF3A-209ENST00000640289 TSPY2A6NKD2 308 aa15.63■□□□□ 0.09
GTF3A-209ENST00000640289 REC8O95072 547 aa15.63■□□□□ 0.09
GTF3A-209ENST00000640289 MAP2K2P36507 400 aa15.63■□□□□ 0.09
GTF3A-209ENST00000640289 GTF2A2P52657 109 aa15.63■□□□□ 0.09
GTF3A-209ENST00000640289 ICA1Q05084 483 aa15.63■□□□□ 0.09
GTF3A-209ENST00000640289 SNAPC2Q13487 334 aa15.63■□□□□ 0.09
GTF3A-209ENST00000640289 C8orf34Q49A92 452 aa15.63■□□□□ 0.09
GTF3A-209ENST00000640289 STOX1Q6ZVD7 989 aa15.63■□□□□ 0.09
GTF3A-209ENST00000640289 NEDD1Q8NHV4 660 aa15.63■□□□□ 0.09
GTF3A-209ENST00000640289 ACER1Q8TDN7 264 aa15.63■□□□□ 0.09
GTF3A-209ENST00000640289 WDR18Q9BV38 432 aa15.63■□□□□ 0.09
GTF3A-209ENST00000640289 ATAD5Q96QE3 1844 aa15.62■□□□□ 0.09
GTF3A-209ENST00000640289 CCL15-CCL14A0A0B4J2E2 113 aa15.62■□□□□ 0.09
GTF3A-209ENST00000640289 IGKV6D-41A0A0C4DH26 115 aa15.62■□□□□ 0.09
GTF3A-209ENST00000640289 A0A1W2PRG0 241 aa15.62■□□□□ 0.09
GTF3A-209ENST00000640289 MANSC4A6NHS7 340 aaPredicted RBP15.62■□□□□ 0.09
GTF3A-209ENST00000640289 B4E1Z4 1266 aa15.62■□□□□ 0.09
GTF3A-209ENST00000640289 E7EWF7 191 aa15.62■□□□□ 0.09
GTF3A-209ENST00000640289 CXCL11O14625 94 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms