RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 ZSWIM4Q9H7M6 989 aa4.42□□□□□ -1.7
GYPB-216ENST00000638448 LRRC4CQ9HCJ2 640 aa4.42□□□□□ -1.7
GYPB-216ENST00000638448 GINM1Q9NU53 330 aa4.42□□□□□ -1.7
GYPB-216ENST00000638448 PRKAG3Q9UGI9 489 aa4.42□□□□□ -1.7
GYPB-216ENST00000638448 DAGLAQ9Y4D2 1042 aa4.42□□□□□ -1.7
GYPB-216ENST00000638448 FAM221AA4D161 298 aa4.41□□□□□ -1.7
GYPB-216ENST00000638448 MINDY4BA8MYZ0 360 aa4.41□□□□□ -1.7
GYPB-216ENST00000638448 CILPO75339 1184 aa4.41□□□□□ -1.7
GYPB-216ENST00000638448 FBXO24O75426 580 aa4.41□□□□□ -1.7
GYPB-216ENST00000638448 LIG1P18858 919 aa4.41□□□□□ -1.7
GYPB-216ENST00000638448 CWF19L2Q2TBE0 894 aaKnown RBP4.41□□□□□ -1.7
GYPB-216ENST00000638448 SDE2Q6IQ49 451 aa4.41□□□□□ -1.7
GYPB-216ENST00000638448 SEZ6L2Q6UXD5 910 aa4.41□□□□□ -1.7
GYPB-216ENST00000638448 RBBP8NLQ8NC74 664 aaPredicted RBP4.41□□□□□ -1.7
GYPB-216ENST00000638448 WDR89Q96FK6 387 aaPredicted RBP4.41□□□□□ -1.7
GYPB-216ENST00000638448 ZC3H12CQ9C0D7 883 aaKnown RBP4.41□□□□□ -1.7
GYPB-216ENST00000638448 MIR1-1HGQ9H1L0 117 aa4.41□□□□□ -1.7
GYPB-216ENST00000638448 CCDC86Q9H6F5 360 aaKnown RBP4.41□□□□□ -1.7
GYPB-216ENST00000638448 LGR6Q9HBX8 967 aa4.41□□□□□ -1.7
GYPB-216ENST00000638448 C1GALT1Q9NS00 363 aa4.41□□□□□ -1.7
GYPB-216ENST00000638448 CACNA2D2Q9NY47 1150 aa4.41□□□□□ -1.7
GYPB-216ENST00000638448 ENPP3O14638 875 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 ZNF862O60290 1169 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 BMP6P22004 513 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 CRKP46108 304 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 GIPRP48546 466 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 ZNF165P49910 485 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 HNRNPUQ00839 825 aaKnown RBP eCLIP4.4□□□□□ -1.71
GYPB-216ENST00000638448 ZNF252P-AS1Q0IIN9 211 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 REC114Q7Z4M0 266 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 C19orf47Q8N9M1 422 aaKnown RBP4.4□□□□□ -1.71
GYPB-216ENST00000638448 FLCNQ8NFG4 579 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 PMFBP1Q8TBY8 1022 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 NKD1Q969G9 470 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 MRFAP1L1Q96HT8 127 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 SHDQ96IW2 340 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 SRRTQ9BXP5 876 aaKnown RBP4.4□□□□□ -1.71
GYPB-216ENST00000638448 PIF1Q9H611 641 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 BSDC1Q9NW68 430 aaPredicted RBP4.4□□□□□ -1.71
GYPB-216ENST00000638448 UBP1Q9NZI7 540 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 ZC3H7BQ9UGR2 993 aaKnown RBP4.4□□□□□ -1.71
GYPB-216ENST00000638448 GPN3Q9UHW5 284 aaPredicted RBP4.4□□□□□ -1.71
GYPB-216ENST00000638448 ZNRF3Q9ULT6 936 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 CDK11AQ9UQ88 783 aaPredicted RBP4.4□□□□□ -1.71
GYPB-216ENST00000638448 TLR6Q9Y2C9 796 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 MSRB2Q9Y3D2 182 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 RNF114Q9Y508 228 aa4.4□□□□□ -1.71
GYPB-216ENST00000638448 U2SURPO15042 1029 aaKnown RBP4.39□□□□□ -1.71
GYPB-216ENST00000638448 PAGE1O75459 146 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 TRIM37O94972 964 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 ATE1O95260 518 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 F13A1P00488 732 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 GSTP1P09211 210 aaKnown RBP4.39□□□□□ -1.71
GYPB-216ENST00000638448 LMNB1P20700 586 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 HSD3B2P26439 372 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 ARNTP27540 789 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 TXKP42681 527 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 CYP27A1Q02318 531 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 ID3Q02535 119 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 FAM160A1Q05DH4 1040 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 CDK5R2Q13319 367 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 MAP3K11Q16584 847 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 DUSP27Q5VZP5 1158 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 EGFLAMQ63HQ2 1017 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 LLGL2Q6P1M3 1020 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 ANKS3Q6ZW76 656 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 CBLL1Q75N03 491 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 TP53INP2Q8IXH6 220 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 NLGN1Q8N2Q7 840 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 GAL3ST3Q96A11 431 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 FBXL18Q96ME1 805 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 EHMT1Q9H9B1 1298 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 PAK6Q9NQU5 681 aaPredicted RBP4.39□□□□□ -1.71
GYPB-216ENST00000638448 CRIM1Q9NZV1 1036 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 PCDHGC5Q9Y5F6 944 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 TACC3Q9Y6A5 838 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 SYNGAP1Q96PV0 1343 aa4.39□□□□□ -1.71
GYPB-216ENST00000638448 ETFBP38117 255 aa4.38□□□□□ -1.71
GYPB-216ENST00000638448 CASP7P55210 303 aa4.38□□□□□ -1.71
GYPB-216ENST00000638448 RPL6Q02878 288 aaKnown RBP4.38□□□□□ -1.71
GYPB-216ENST00000638448 RASA3Q14644 834 aa4.38□□□□□ -1.71
GYPB-216ENST00000638448 KIF4BQ2VIQ3 1234 aa4.38□□□□□ -1.71
GYPB-216ENST00000638448 ZNF574Q6ZN55 896 aaPredicted RBP4.38□□□□□ -1.71
GYPB-216ENST00000638448 PDZD3Q86UT5 571 aa4.38□□□□□ -1.71
GYPB-216ENST00000638448 WFDC3Q8IUB2 231 aa4.38□□□□□ -1.71
GYPB-216ENST00000638448 SULF2Q8IWU5 870 aa4.38□□□□□ -1.71
GYPB-216ENST00000638448 ANKRD13AQ8IZ07 590 aa4.38□□□□□ -1.71
GYPB-216ENST00000638448 STK35Q8TDR2 534 aa4.38□□□□□ -1.71
GYPB-216ENST00000638448 FANCD2OSQ96PS1 177 aa4.38□□□□□ -1.71
GYPB-216ENST00000638448 TRIM55Q9BYV6 548 aa4.38□□□□□ -1.71
GYPB-216ENST00000638448 BRINP2Q9C0B6 783 aa4.38□□□□□ -1.71
GYPB-216ENST00000638448 CCDC113Q9H0I3 377 aa4.38□□□□□ -1.71
GYPB-216ENST00000638448 PIDD1Q9HB75 910 aa4.38□□□□□ -1.71
GYPB-216ENST00000638448 KRT82Q9NSB4 513 aa4.38□□□□□ -1.71
GYPB-216ENST00000638448 PRR36Q9H6K5 1346 aa4.38□□□□□ -1.71
GYPB-216ENST00000638448 KRTAP4-8A0A0G2JLE6 195 aa4.37□□□□□ -1.71
GYPB-216ENST00000638448 ANKRD62A6NC57 917 aa4.37□□□□□ -1.71
GYPB-216ENST00000638448 BTBD11A6QL63 1104 aa4.37□□□□□ -1.71
GYPB-216ENST00000638448 MEIS3P2A8K0S8 358 aa4.37□□□□□ -1.71
GYPB-216ENST00000638448 BPNT1O95861 308 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms