RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 PSAPP07602 524 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 RARAP10276 462 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 TIMP2P16035 220 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 NME2P22392 152 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 GPC1P35052 558 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 WDR4P57081 412 aaKnown RBP3.28□□□□□ -1.88
HMHB1-202ENST00000638299 ATP11AP98196 1134 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 RPL6Q02878 288 aaKnown RBP3.28□□□□□ -1.88
HMHB1-202ENST00000638299 HYAL2Q12891 473 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 RAPGEF1Q13905 1077 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 GRM3Q14832 879 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 NCAPHQ15003 741 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 PTPN21Q16825 1174 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 SV2CQ496J9 727 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 COBLL1Q53SF7 1204 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 OVOS1Q6IE37 1185 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 LLGL2Q6P1M3 1020 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 SULF2Q8IWU5 870 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 AMOTL1Q8IY63 956 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 PAF1Q8N7H5 531 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 PARD3BQ8TEW8 1205 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 TMEM40Q8WWA1 233 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 KIFC2Q96AC6 838 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 ATG4CQ96DT6 458 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 NEUROD6Q96NK8 337 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 NSUN5Q96P11 429 aaKnown RBP3.28□□□□□ -1.88
HMHB1-202ENST00000638299 SARGQ9BW04 601 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 MRPL4Q9BYD3 311 aaKnown RBP3.28□□□□□ -1.88
HMHB1-202ENST00000638299 RASSF4Q9H2L5 321 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 SLC12A5Q9H2X9 1139 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 RUBCNLQ9H714 662 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 FBRSQ9HAH7 460 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 ZFYVE1Q9HBF4 777 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 GPAMQ9HCL2 828 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 VTA1Q9NP79 307 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 POLMQ9NP87 494 aaPredicted RBP3.28□□□□□ -1.88
HMHB1-202ENST00000638299 CRTAC1Q9NQ79 661 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 STRN4Q9NRL3 753 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 HCN2Q9UL51 889 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 LZTS1Q9Y250 596 aa3.28□□□□□ -1.88
HMHB1-202ENST00000638299 TRAV20A0A0B4J274 112 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 E2F8A0AVK6 867 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 GOLGA6CA6NDK9 693 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 GOLGA6BA6NDN3 693 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 J3QW42 95 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 PDE2AO00408 941 aaPredicted RBP3.27□□□□□ -1.89
HMHB1-202ENST00000638299 GFRA2O00451 464 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 WNT7AO00755 349 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 PRODHO43272 600 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 TBX1O43435 398 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 ZNF500O60304 480 aaPredicted RBP3.27□□□□□ -1.89
HMHB1-202ENST00000638299 NBNO60934 754 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 TCEA3O75764 348 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 PRKD3O94806 890 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 APBA3O96018 575 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 C6orf222P0C671 652 aaPredicted RBP3.27□□□□□ -1.89
HMHB1-202ENST00000638299 GOLGA6DP0CG33 693 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 NME1P15531 152 aaKnown RBP3.27□□□□□ -1.89
HMHB1-202ENST00000638299 CPEP16870 476 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 NFKB1P19838 968 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 ARNTP27540 789 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 POLR2BP30876 1174 aaKnown RBP3.27□□□□□ -1.89
HMHB1-202ENST00000638299 HALP42357 657 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 DGKGP49619 791 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 PPP2R2AP63151 447 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 MLLT1Q03111 559 aaPredicted RBP3.27□□□□□ -1.89
HMHB1-202ENST00000638299 ZNF252P-AS1Q0IIN9 211 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 GRB10Q13322 594 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 CCINQ13939 588 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 SIM2Q14190 667 aaPredicted RBP3.27□□□□□ -1.89
HMHB1-202ENST00000638299 INPP5AQ14642 412 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 PCBP2Q15366 365 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMHB1-202ENST00000638299 GNPTABQ3T906 1256 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 ZC3H12BQ5HYM0 836 aaKnown RBP3.27□□□□□ -1.89
HMHB1-202ENST00000638299 RPS26P11Q5JNZ5 115 aaPredicted RBP3.27□□□□□ -1.89
HMHB1-202ENST00000638299 SYDE2Q5VT97 1194 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 ANO1Q5XXA6 986 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 NYAP1Q6ZVC0 841 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 HFE2Q6ZVN8 426 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 BRAPQ7Z569 592 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 PPFIBP1Q86W92 1011 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 SPATS2Q86XZ4 545 aaKnown RBP3.27□□□□□ -1.89
HMHB1-202ENST00000638299 CBARPQ8N350 705 aaPredicted RBP3.27□□□□□ -1.89
HMHB1-202ENST00000638299 TMEM102Q8N9M5 508 aaPredicted RBP3.27□□□□□ -1.89
HMHB1-202ENST00000638299 PJA1Q8NG27 643 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 SCLYQ96I15 445 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 LRGUKQ96M69 825 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 CAMKK2Q96RR4 588 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 STRBPQ96SI9 672 aaKnown RBP3.27□□□□□ -1.89
HMHB1-202ENST00000638299 ZC3H12CQ9C0D7 883 aaKnown RBP3.27□□□□□ -1.89
HMHB1-202ENST00000638299 SLC52A2Q9HAB3 445 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 AS3MTQ9HBK9 375 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 LUC7LQ9NQ29 371 aaKnown RBP3.27□□□□□ -1.89
HMHB1-202ENST00000638299 ANLNQ9NQW6 1124 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 GOLGA6AQ9NYA3 693 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 TLR7Q9NYK1 1049 aaKnown RBP3.27□□□□□ -1.89
HMHB1-202ENST00000638299 LUZP4Q9P127 313 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 REV1Q9UBZ9 1251 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 SUSD2Q9UGT4 822 aa3.27□□□□□ -1.89
HMHB1-202ENST00000638299 SWAP70Q9UH65 585 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 752 ms