RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276		A0A1B0GVL5	298 aa		18.16	■□□□□ 0.5
CACNA1A-238	ENST00000637276	PDE4D	Q08499	809 aa		18.16	■□□□□ 0.5
CACNA1A-238	ENST00000637276	MCMDC2	Q4G0Z9	681 aa		18.16	■□□□□ 0.5
CACNA1A-238	ENST00000637276	TTBK2	Q6IQ55	1244 aa		18.16	■□□□□ 0.5
CACNA1A-238	ENST00000637276	RAPH1	Q70E73	1250 aa		18.16	■□□□□ 0.5
CACNA1A-238	ENST00000637276	IFNL2	Q8IZJ0	200 aa		18.16	■□□□□ 0.5
CACNA1A-238	ENST00000637276	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	18.16	■□□□□ 0.5
CACNA1A-238	ENST00000637276	GBP1	P32455	592 aa		18.16	■□□□□ 0.5
CACNA1A-238	ENST00000637276	NCAPG2	Q86XI2	1143 aa		18.16	■□□□□ 0.5
CACNA1A-238	ENST00000637276	BRDT	Q58F21	947 aa	Predicted RBP	18.16	■□□□□ 0.5
CACNA1A-238	ENST00000637276	AFAP1L2	Q8N4X5	818 aa		18.16	■□□□□ 0.5
CACNA1A-238	ENST00000637276	YIPF2	Q9BWQ6	316 aa		18.16	■□□□□ 0.5
CACNA1A-238	ENST00000637276	SAMSN1	Q9NSI8	373 aa	Known RBP	18.16	■□□□□ 0.5
CACNA1A-238	ENST00000637276	U2AF2	P26368	475 aa	Known RBP eCLIP	18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	SMTN	P53814	917 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	SMAD1	Q15797	465 aa	Known RBP	18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	TPH2	Q8IWU9	490 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	PGBD1	Q96JS3	809 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	TCP10L2	B9ZVM9	353 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	MYL10	Q9BUA6	226 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	ARHGEF35	A5YM69	484 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	RHPN1	Q8TCX5	695 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	EXT2	Q93063	718 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	SLC7A5P2	Q9GIP4	190 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	VGLL3	A8MV65	326 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	TAF5L	O75529	589 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	ECE1	P42892	770 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	TEX11	Q8IYF3	940 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	CMTR1	Q8N1G2	835 aa	Known RBP	18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	RSRC1	Q96IZ7	334 aa	Known RBP	18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	MRPL44	Q9H9J2	332 aa	Known RBP	18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	LMCD1	Q9NZU5	365 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	IGF1R	P08069	1367 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	PRDM1	O75626	825 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	ABCB4	P21439	1286 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	IRX3	P78415	501 aa	Predicted RBP	18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	TBCC	Q15814	346 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	LARGE2	Q8N3Y3	721 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	NCAPG	Q9BPX3	1015 aa		18.15	■□□□□ 0.5
CACNA1A-238	ENST00000637276	PTPRC	P08575	1304 aa		18.14	■□□□□ 0.5
CACNA1A-238	ENST00000637276	GOLGA8CP	A6NN73	597 aa		18.14	■□□□□ 0.5
CACNA1A-238	ENST00000637276	GOLGA8F	Q08AF8	430 aa		18.14	■□□□□ 0.5
CACNA1A-238	ENST00000637276	GOLGA8DP	Q0D2H9	430 aa		18.14	■□□□□ 0.5
CACNA1A-238	ENST00000637276	PPP2R5E	Q16537	467 aa		18.14	■□□□□ 0.5
CACNA1A-238	ENST00000637276	NBPF3	Q9H094	633 aa		18.14	■□□□□ 0.5
CACNA1A-238	ENST00000637276	ARMT1	Q9H993	441 aa		18.14	■□□□□ 0.5
CACNA1A-238	ENST00000637276	PAG1	Q9NWQ8	432 aa		18.14	■□□□□ 0.5
CACNA1A-238	ENST00000637276	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	18.14	■□□□□ 0.5
CACNA1A-238	ENST00000637276	NDUFB9	Q9Y6M9	179 aa		18.14	■□□□□ 0.5
CACNA1A-238	ENST00000637276	CLNS1A	P54105	237 aa	Known RBP	18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	TYRO3	Q06418	890 aa		18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	MMEL1	Q495T6	779 aa		18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	GPR161	Q8N6U8	529 aa	Known RBP	18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	RSAD2	Q8WXG1	361 aa		18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	SUGCT	Q9HAC7	445 aa		18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	OCM2	P0CE71	109 aa		18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	OCM	P0CE72	109 aa	Predicted RBP	18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	GUCY2F	P51841	1108 aa		18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	SMAD5	Q99717	465 aa	Known RBP	18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	ZRANB2	O95218	330 aa	Known RBP eCLIP	18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	CYP2J2	P51589	502 aa		18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	GDAP1	Q8TB36	358 aa		18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	FGD4	Q96M96	766 aa		18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	BLZF1	Q9H2G9	400 aa		18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	TNN	Q9UQP3	1299 aa		18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276		I3L4J1	428 aa		18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	PNMA8A	Q86V59	439 aa	Predicted RBP	18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	KCNG4	Q8TDN1	519 aa		18.14	■□□□□ 0.49
CACNA1A-238	ENST00000637276	IFNB1	P01574	187 aa		18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	ATF7	P17544	494 aa	Predicted RBP	18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	C17orf53	Q8N3J3	647 aa	Predicted RBP	18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	ZGPAT	Q8N5A5	531 aa	Known RBP	18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	RAB3IP	Q96QF0	476 aa	Predicted RBP	18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	KRT86	O43790	486 aa		18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	CTDSPL2	Q05D32	466 aa		18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	SV2B	Q7L1I2	683 aa		18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	ANGPTL3	Q9Y5C1	460 aa		18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276		F5H423	210 aa	Predicted RBP	18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	PRKAG2	Q9UGJ0	569 aa		18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	SPTLC2	O15270	562 aa		18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	SNRPA1	P09661	255 aa	Known RBP	18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	ZCRB1	Q8TBF4	217 aa	Known RBP	18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	PYM1	Q9BRP8	204 aa	Known RBP	18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	LIN9	Q5TKA1	542 aa		18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	NBPF11	Q86T75	865 aa		18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	TRIM50	Q86XT4	487 aa		18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	RBSN	Q9H1K0	784 aa		18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	TFCP2	Q12800	502 aa		18.13	■□□□□ 0.49
CACNA1A-238	ENST00000637276	OTULIN	Q96BN8	352 aa		18.12	■□□□□ 0.49
CACNA1A-238	ENST00000637276	CTTNBP2NL	Q9P2B4	639 aa		18.12	■□□□□ 0.49
CACNA1A-238	ENST00000637276	DDAH1	O94760	285 aa		18.12	■□□□□ 0.49
CACNA1A-238	ENST00000637276	PALM2	Q8IXS6	379 aa		18.12	■□□□□ 0.49
CACNA1A-238	ENST00000637276	CACNA2D3	Q8IZS8	1091 aa		18.12	■□□□□ 0.49
CACNA1A-238	ENST00000637276	FAM76A	Q8TAV0	307 aa		18.12	■□□□□ 0.49
CACNA1A-238	ENST00000637276	CCDC105	Q8IYK2	499 aa		18.12	■□□□□ 0.49
CACNA1A-238	ENST00000637276	PPP4R1	Q8TF05	950 aa		18.12	■□□□□ 0.49
CACNA1A-238	ENST00000637276	SERPINB6	P35237	376 aa		18.12	■□□□□ 0.49
CACNA1A-238	ENST00000637276	RBM17	Q96I25	401 aa	Known RBP	18.12	■□□□□ 0.49
CACNA1A-238	ENST00000637276	PTPN22	Q9Y2R2	807 aa		18.12	■□□□□ 0.49
CACNA1A-238	ENST00000637276	CWF19L2	Q2TBE0	894 aa	Known RBP	18.12	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms