RNA–Protein interactions for RNA: ENST00000633956.1

SORT1-210, Transcript of sortilin 1, humanhuman

TSL 4

Gene SORT1, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-210ENST00000633956 ENAHQ8N8S7 591 aaPredicted RBP6.43□□□□□ -1.38
SORT1-210ENST00000633956 NUP133Q8WUM0 1156 aa6.43□□□□□ -1.38
SORT1-210ENST00000633956 TEKT1Q969V4 418 aa6.43□□□□□ -1.38
SORT1-210ENST00000633956 ZSCAN10Q96SZ4 725 aaPredicted RBP6.43□□□□□ -1.38
SORT1-210ENST00000633956 PSMD1Q99460 953 aa6.43□□□□□ -1.38
SORT1-210ENST00000633956 SGIP1Q9BQI5 828 aa6.43□□□□□ -1.38
SORT1-210ENST00000633956 MTA3Q9BTC8 594 aa6.43□□□□□ -1.38
SORT1-210ENST00000633956 FAM217BQ9NTX9 383 aaPredicted RBP6.43□□□□□ -1.38
SORT1-210ENST00000633956 PIM2Q9P1W9 311 aa6.43□□□□□ -1.38
SORT1-210ENST00000633956 ORC3Q9UBD5 711 aaPredicted RBP6.43□□□□□ -1.38
SORT1-210ENST00000633956 TRPC6Q9Y210 931 aa6.43□□□□□ -1.38
SORT1-210ENST00000633956 CNPY2Q9Y2B0 182 aa6.43□□□□□ -1.38
SORT1-210ENST00000633956 SLC12A7Q9Y666 1083 aa6.43□□□□□ -1.38
SORT1-210ENST00000633956 ROBO3Q96MS0 1386 aa6.43□□□□□ -1.38
SORT1-210ENST00000633956 SCN9AQ15858 1988 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 DDX60LQ5H9U9 1706 aaKnown RBP6.42□□□□□ -1.38
SORT1-210ENST00000633956 TSPY2A6NKD2 308 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 H3BQV1 296 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 PSMD14O00487 310 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 CPLX1O14810 134 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 DHX16O60231 1041 aaKnown RBP6.42□□□□□ -1.38
SORT1-210ENST00000633956 WDHD1O75717 1129 aaPredicted RBP6.42□□□□□ -1.38
SORT1-210ENST00000633956 RAD17O75943 681 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 NCLP19338 710 aaKnown RBP6.42□□□□□ -1.38
SORT1-210ENST00000633956 RASA1P20936 1047 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 PTGER2P43116 358 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 CDK8P49336 464 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 RBM5P52756 815 aaKnown RBP eCLIP6.42□□□□□ -1.38
SORT1-210ENST00000633956 TFAP4Q01664 338 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 NTRK3Q16288 839 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 RTN1Q16799 776 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 GRIPAP1Q4V328 841 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 DALRD3Q5D0E6 543 aaKnown RBP6.42□□□□□ -1.38
SORT1-210ENST00000633956 IFIT1BQ5T764 474 aaKnown RBP6.42□□□□□ -1.38
SORT1-210ENST00000633956 IFFO2Q5TF58 517 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 OTUD7BQ6GQQ9 843 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 APOBEC3HQ6NTF7 200 aaKnown RBP6.42□□□□□ -1.38
SORT1-210ENST00000633956 FAM173BQ6P4H8 233 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 C16orf86Q6ZW13 317 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 IQCA1Q86XH1 822 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 TMTC2Q8N394 836 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 LARGE2Q8N3Y3 721 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 PHKBQ93100 1093 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 CHMP4CQ96CF2 233 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 AIFM3Q96NN9 605 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 GZF1Q9H116 711 aaPredicted RBP6.42□□□□□ -1.38
SORT1-210ENST00000633956 MKNK2Q9HBH9 465 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 TAOK2Q9UL54 1235 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 KIF3AQ9Y496 699 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 CDK5RAP2Q96SN8 1893 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 NID2Q14112 1375 aa6.42□□□□□ -1.38
SORT1-210ENST00000633956 UBE2Q2LH0YL09 131 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 FIBPO43427 364 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 GADD45BO75293 160 aaPredicted RBP6.41□□□□□ -1.38
SORT1-210ENST00000633956 CDKL5O76039 1030 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 SLURP2P0DP57 97 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 PDIA4P13667 645 aaKnown RBP6.41□□□□□ -1.38
SORT1-210ENST00000633956 IARSP41252 1262 aaKnown RBP6.41□□□□□ -1.38
SORT1-210ENST00000633956 ATN1P54259 1190 aaPredicted RBP6.41□□□□□ -1.38
SORT1-210ENST00000633956 CACNB3P54284 484 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 HDLBPQ00341 1268 aaKnown RBP6.41□□□□□ -1.38
SORT1-210ENST00000633956 TCP10Q12799 353 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 NFIAQ12857 509 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 TPRNQ4KMQ1 711 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 SOGA3Q5TF21 947 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 RSBN1LQ6PCB5 846 aaPredicted RBP6.41□□□□□ -1.38
SORT1-210ENST00000633956 CPLX2Q6PUV4 134 aaKnown RBP6.41□□□□□ -1.38
SORT1-210ENST00000633956 USP48Q86UV5 1035 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 ZFPM1Q8IX07 1006 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 NIM1KQ8IY84 436 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 ZNF444Q8N0Y2 327 aaPredicted RBP6.41□□□□□ -1.38
SORT1-210ENST00000633956 CMTR1Q8N1G2 835 aaKnown RBP6.41□□□□□ -1.38
SORT1-210ENST00000633956 CCDC82Q8N4S0 544 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 NLGN2Q8NFZ4 835 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 GPT2Q8TD30 523 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 C8orf76Q96K31 380 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 ZDHHC15Q96MV8 337 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 ALG1Q9BT22 464 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 MRIQ9BWK5 157 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 SLC26A6Q9BXS9 759 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 OSBPL5Q9H0X9 879 aaPredicted RBP6.41□□□□□ -1.38
SORT1-210ENST00000633956 IL17RBQ9NRM6 502 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 GJB4Q9NTQ9 266 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 ATP6V1DQ9Y5K8 247 aa6.41□□□□□ -1.38
SORT1-210ENST00000633956 DDX49Q9Y6V7 483 aaKnown RBP6.41□□□□□ -1.38
SORT1-210ENST00000633956 POTEFA5A3E0 1075 aa6.4□□□□□ -1.38
SORT1-210ENST00000633956 NFKBIEO00221 500 aa6.4□□□□□ -1.38
SORT1-210ENST00000633956 DDAH1O94760 285 aa6.4□□□□□ -1.38
SORT1-210ENST00000633956 PLEKHA8P1O95397 391 aa6.4□□□□□ -1.38
SORT1-210ENST00000633956 FMNL1O95466 1100 aaPredicted RBP6.4□□□□□ -1.38
SORT1-210ENST00000633956 VIL1P09327 827 aaKnown RBP6.4□□□□□ -1.38
SORT1-210ENST00000633956 TSPY3P0CV98 308 aa6.4□□□□□ -1.38
SORT1-210ENST00000633956 TSPY8P0CW00 308 aa6.4□□□□□ -1.38
SORT1-210ENST00000633956 GUCY1A2P33402 732 aa6.4□□□□□ -1.38
SORT1-210ENST00000633956 RCAN1P53805 252 aa6.4□□□□□ -1.38
SORT1-210ENST00000633956 RASSF7Q02833 373 aa6.4□□□□□ -1.38
SORT1-210ENST00000633956 SSRP1Q08945 709 aaKnown RBP6.4□□□□□ -1.38
SORT1-210ENST00000633956 SKOR2Q2VWA4 1001 aaPredicted RBP6.4□□□□□ -1.38
SORT1-210ENST00000633956 CFAP100Q494V2 611 aa6.4□□□□□ -1.38
SORT1-210ENST00000633956 RCSD1Q6JBY9 416 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms