RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 POTEFA5A3E0 1075 aa13.1□□□□□ -0.31
SSBP4-215ENST00000625926 USP17L10C9JJH3 530 aa13.1□□□□□ -0.31
SSBP4-215ENST00000625926 GH2P01242 217 aa13.1□□□□□ -0.31
SSBP4-215ENST00000625926 ADD2P35612 726 aa13.1□□□□□ -0.31
SSBP4-215ENST00000625926 GCLCP48506 637 aaPredicted RBP13.1□□□□□ -0.31
SSBP4-215ENST00000625926 PLCD1P51178 756 aa13.1□□□□□ -0.31
SSBP4-215ENST00000625926 RRP1P56182 461 aaKnown RBP13.1□□□□□ -0.31
SSBP4-215ENST00000625926 CERKLQ49MI3 558 aaPredicted RBP13.1□□□□□ -0.31
SSBP4-215ENST00000625926 ZSCAN25Q6NSZ9 544 aa13.1□□□□□ -0.31
SSBP4-215ENST00000625926 LCORLQ8N3X6 602 aa13.1□□□□□ -0.31
SSBP4-215ENST00000625926 ANKRD13CQ8N6S4 541 aa13.1□□□□□ -0.31
SSBP4-215ENST00000625926 RAET1EQ8TD07 263 aa13.1□□□□□ -0.31
SSBP4-215ENST00000625926 MCM9Q9NXL9 1143 aa13.1□□□□□ -0.31
SSBP4-215ENST00000625926 MYPNQ86TC9 1320 aa13.1□□□□□ -0.31
SSBP4-215ENST00000625926 MYH2Q9UKX2 1941 aa13.09□□□□□ -0.31
SSBP4-215ENST00000625926 UBE3CQ15386 1083 aa13.09□□□□□ -0.31
SSBP4-215ENST00000625926 SHROOM1Q2M3G4 852 aaPredicted RBP13.09□□□□□ -0.31
SSBP4-215ENST00000625926 SH3TC2Q8TF17 1288 aa13.09□□□□□ -0.31
SSBP4-215ENST00000625926 SDR42E1Q8WUS8 393 aa13.09□□□□□ -0.31
SSBP4-215ENST00000625926 GPATCH3Q96I76 525 aa13.09□□□□□ -0.31
SSBP4-215ENST00000625926 YTHDC1Q96MU7 727 aaKnown RBP13.09□□□□□ -0.31
SSBP4-215ENST00000625926 ASCC2Q9H1I8 757 aaPredicted RBP13.09□□□□□ -0.31
SSBP4-215ENST00000625926 ARMT1Q9H993 441 aa13.09□□□□□ -0.31
SSBP4-215ENST00000625926 CABP5Q9NP86 173 aa13.09□□□□□ -0.31
SSBP4-215ENST00000625926 DCP1AQ9NPI6 582 aaPredicted RBP13.09□□□□□ -0.31
SSBP4-215ENST00000625926 PCDHB15Q9Y5E8 787 aa13.09□□□□□ -0.31
SSBP4-215ENST00000625926 LAMB1P07942 1786 aa13.09□□□□□ -0.31
SSBP4-215ENST00000625926 TNPO2O14787 897 aaKnown RBP13.08□□□□□ -0.32
SSBP4-215ENST00000625926 MBD4O95243 580 aa13.08□□□□□ -0.32
SSBP4-215ENST00000625926 MYCP01106 439 aaPredicted RBP13.08□□□□□ -0.32
SSBP4-215ENST00000625926 HOXA7P31268 230 aaPredicted RBP13.08□□□□□ -0.32
SSBP4-215ENST00000625926 GRK4P32298 578 aa13.08□□□□□ -0.32
SSBP4-215ENST00000625926 IRX3P78415 501 aaPredicted RBP13.08□□□□□ -0.32
SSBP4-215ENST00000625926 PRKCZQ05513 592 aa13.08□□□□□ -0.32
SSBP4-215ENST00000625926 FAM110CQ1W6H9 321 aa13.08□□□□□ -0.32
SSBP4-215ENST00000625926 ABCB5Q2M3G0 1257 aa13.08□□□□□ -0.32
SSBP4-215ENST00000625926 ATP8A2Q9NTI2 1148 aa13.08□□□□□ -0.32
SSBP4-215ENST00000625926 PRKAB2O43741 272 aa13.07□□□□□ -0.32
SSBP4-215ENST00000625926 EN2P19622 333 aaPredicted RBP13.07□□□□□ -0.32
SSBP4-215ENST00000625926 SHMT1P34896 483 aa13.07□□□□□ -0.32
SSBP4-215ENST00000625926 GABPAQ06546 454 aa13.07□□□□□ -0.32
SSBP4-215ENST00000625926 RAB3GAP1Q15042 981 aa13.07□□□□□ -0.32
SSBP4-215ENST00000625926 SLFNL1Q499Z3 407 aa13.07□□□□□ -0.32
SSBP4-215ENST00000625926 USP17L2Q6R6M4 530 aa13.07□□□□□ -0.32
SSBP4-215ENST00000625926 COA7Q96BR5 231 aa13.07□□□□□ -0.32
SSBP4-215ENST00000625926 P2RX7Q99572 595 aaKnown RBP13.07□□□□□ -0.32
SSBP4-215ENST00000625926 EMILIN3Q9NT22 766 aa13.07□□□□□ -0.32
SSBP4-215ENST00000625926 TAOK2Q9UL54 1235 aa13.07□□□□□ -0.32
SSBP4-215ENST00000625926 DLL1O00548 723 aa13.06□□□□□ -0.32
SSBP4-215ENST00000625926 FLT3LGP49771 235 aa13.06□□□□□ -0.32
SSBP4-215ENST00000625926 USP14P54578 494 aa13.06□□□□□ -0.32
SSBP4-215ENST00000625926 AMOTL1Q8IY63 956 aa13.06□□□□□ -0.32
SSBP4-215ENST00000625926 SLAIN1Q8ND83 568 aa13.06□□□□□ -0.32
SSBP4-215ENST00000625926 DDRGK1Q96HY6 314 aa13.06□□□□□ -0.32
SSBP4-215ENST00000625926 FEZ1Q99689 392 aa13.06□□□□□ -0.32
SSBP4-215ENST00000625926 BIN2Q9UBW5 565 aaPredicted RBP13.06□□□□□ -0.32
SSBP4-215ENST00000625926 SWAP70Q9UH65 585 aa13.06□□□□□ -0.32
SSBP4-215ENST00000625926 GABRQQ9UN88 632 aa13.06□□□□□ -0.32
SSBP4-215ENST00000625926 CUL9Q8IWT3 2517 aa13.06□□□□□ -0.32
SSBP4-215ENST00000625926 MPHOSPH10O00566 681 aaKnown RBP13.05□□□□□ -0.32
SSBP4-215ENST00000625926 CHGBP05060 677 aa13.05□□□□□ -0.32
SSBP4-215ENST00000625926 CYP2D6P10635 497 aa13.05□□□□□ -0.32
SSBP4-215ENST00000625926 UBXN2AP68543 259 aa13.05□□□□□ -0.32
SSBP4-215ENST00000625926 IRF5Q13568 498 aa13.05□□□□□ -0.32
SSBP4-215ENST00000625926 KBTBD3Q8NAB2 608 aa13.05□□□□□ -0.32
SSBP4-215ENST00000625926 PXYLP1Q8TE99 480 aa13.05□□□□□ -0.32
SSBP4-215ENST00000625926 C12orf42Q96LP6 360 aa13.05□□□□□ -0.32
SSBP4-215ENST00000625926 CRBNQ96SW2 442 aa13.05□□□□□ -0.32
SSBP4-215ENST00000625926 KIAA1683Q9H0B3 1180 aa13.05□□□□□ -0.32
SSBP4-215ENST00000625926 PUS7LQ9H0K6 701 aaKnown RBP13.05□□□□□ -0.32
SSBP4-215ENST00000625926 MORF4L1Q9UBU8 362 aa13.05□□□□□ -0.32
SSBP4-215ENST00000625926 SLC4A4Q9Y6R1 1079 aa13.05□□□□□ -0.32
SSBP4-215ENST00000625926 MAST2Q6P0Q8 1798 aa13.04□□□□□ -0.32
SSBP4-215ENST00000625926 DOCK2Q92608 1830 aa13.04□□□□□ -0.32
SSBP4-215ENST00000625926 ADCY3O60266 1144 aa13.04□□□□□ -0.32
SSBP4-215ENST00000625926 HERVK_113P62684 666 aa13.04□□□□□ -0.32
SSBP4-215ENST00000625926 EVX2Q03828 476 aa13.04□□□□□ -0.32
SSBP4-215ENST00000625926 MTFR1Q15390 333 aa13.04□□□□□ -0.32
SSBP4-215ENST00000625926 ZYXQ15942 572 aaKnown RBP13.04□□□□□ -0.32
SSBP4-215ENST00000625926 C12orf60Q5U649 245 aa13.04□□□□□ -0.32
SSBP4-215ENST00000625926 TSHZ3Q63HK5 1081 aa13.04□□□□□ -0.32
SSBP4-215ENST00000625926 GPRC5AQ8NFJ5 357 aa13.04□□□□□ -0.32
SSBP4-215ENST00000625926 ACER1Q8TDN7 264 aa13.04□□□□□ -0.32
SSBP4-215ENST00000625926 GTF3C2Q8WUA4 911 aaPredicted RBP13.04□□□□□ -0.32
SSBP4-215ENST00000625926 DYNLL2Q96FJ2 89 aa13.04□□□□□ -0.32
SSBP4-215ENST00000625926 TTC41PQ6P2S7 1318 aa13.04□□□□□ -0.32
SSBP4-215ENST00000625926 USP17L15C9J2P7 530 aa13.03□□□□□ -0.32
SSBP4-215ENST00000625926 USP17L13C9JLJ4 530 aa13.03□□□□□ -0.32
SSBP4-215ENST00000625926 USP17L12C9JPN9 530 aa13.03□□□□□ -0.32
SSBP4-215ENST00000625926 USP17L11C9JVI0 530 aa13.03□□□□□ -0.32
SSBP4-215ENST00000625926 USP17L21D6R901 530 aa13.03□□□□□ -0.32
SSBP4-215ENST00000625926 USP17L18D6R9N7 530 aa13.03□□□□□ -0.32
SSBP4-215ENST00000625926 USP17L22D6RA61 530 aa13.03□□□□□ -0.32
SSBP4-215ENST00000625926 USP17L17D6RBQ6 530 aa13.03□□□□□ -0.32
SSBP4-215ENST00000625926 USP17L19D6RCP7 530 aa13.03□□□□□ -0.32
SSBP4-215ENST00000625926 USP17L20D6RJB6 530 aa13.03□□□□□ -0.32
SSBP4-215ENST00000625926 ERC2O15083 957 aa13.03□□□□□ -0.32
SSBP4-215ENST00000625926 RNF113AO15541 343 aaKnown RBP13.03□□□□□ -0.32
SSBP4-215ENST00000625926 ZFYP08048 801 aaPredicted RBP13.03□□□□□ -0.32
SSBP4-215ENST00000625926 GUCY1A2P33402 732 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms