RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 COA1Q9GZY4 146 aa22.83■■□□□ 1.24
TREX1-205ENST00000625293 NUP62CLQ9H1M0 184 aa22.83■■□□□ 1.24
TREX1-205ENST00000625293 GAKO14976 1311 aa22.82■■□□□ 1.24
TREX1-205ENST00000625293 POLR3DP05423 398 aaPredicted RBP22.82■■□□□ 1.24
TREX1-205ENST00000625293 USP5P45974 858 aa22.82■■□□□ 1.24
TREX1-205ENST00000625293 MFSD14BQ5SR56 506 aa22.82■■□□□ 1.24
TREX1-205ENST00000625293 IFIT1BQ5T764 474 aaKnown RBP22.82■■□□□ 1.24
TREX1-205ENST00000625293 STYK1Q6J9G0 422 aa22.82■■□□□ 1.24
TREX1-205ENST00000625293 LINC00301Q8NCQ3 95 aa22.82■■□□□ 1.24
TREX1-205ENST00000625293 BICD2Q8TD16 824 aa22.82■■□□□ 1.24
TREX1-205ENST00000625293 WASF1Q92558 559 aa22.82■■□□□ 1.24
TREX1-205ENST00000625293 CLSTN2Q9H4D0 955 aa22.82■■□□□ 1.24
TREX1-205ENST00000625293 SLX4Q8IY92 1834 aa22.82■■□□□ 1.24
TREX1-205ENST00000625293 MYH2Q9UKX2 1941 aa22.82■■□□□ 1.24
TREX1-205ENST00000625293 NR1I2O75469 434 aa22.81■■□□□ 1.24
TREX1-205ENST00000625293 YEATS4O95619 227 aa22.81■■□□□ 1.24
TREX1-205ENST00000625293 GUCY1A2P33402 732 aa22.81■■□□□ 1.24
TREX1-205ENST00000625293 PDE4BQ07343 736 aa22.81■■□□□ 1.24
TREX1-205ENST00000625293 TROAPQ12815 778 aa22.81■■□□□ 1.24
TREX1-205ENST00000625293 NUP133Q8WUM0 1156 aa22.81■■□□□ 1.24
TREX1-205ENST00000625293 U2AF2P26368 475 aaKnown RBP eCLIP22.81■■□□□ 1.24
TREX1-205ENST00000625293 BTDP43251 543 aa22.81■■□□□ 1.24
TREX1-205ENST00000625293 MPNDQ8N594 471 aa22.81■■□□□ 1.24
TREX1-205ENST00000625293 NOL10Q9BSC4 688 aaKnown RBP22.81■■□□□ 1.24
TREX1-205ENST00000625293 DDAH1O94760 285 aa22.8■■□□□ 1.24
TREX1-205ENST00000625293 DEXIO95424 95 aa22.8■■□□□ 1.24
TREX1-205ENST00000625293 YY1P25490 414 aa22.8■■□□□ 1.24
TREX1-205ENST00000625293 FUT2Q10981 343 aa22.8■■□□□ 1.24
TREX1-205ENST00000625293 CATIPQ7Z7H3 387 aa22.8■■□□□ 1.24
TREX1-205ENST00000625293 TRIM22Q8IYM9 498 aa22.8■■□□□ 1.24
TREX1-205ENST00000625293 RNF214Q8ND24 703 aa22.8■■□□□ 1.24
TREX1-205ENST00000625293 CNKSR1Q969H4 720 aa22.8■■□□□ 1.24
TREX1-205ENST00000625293 PDLIM2Q96JY6 352 aa22.8■■□□□ 1.24
TREX1-205ENST00000625293 CLIC4Q9Y696 253 aa22.8■■□□□ 1.24
TREX1-205ENST00000625293 DDX60LQ5H9U9 1706 aaKnown RBP22.8■■□□□ 1.24
TREX1-205ENST00000625293 MAP3K11Q16584 847 aa22.79■■□□□ 1.24
TREX1-205ENST00000625293 FAM47AQ5JRC9 791 aa22.79■■□□□ 1.24
TREX1-205ENST00000625293 TGFBRAP1Q8WUH2 860 aa22.79■■□□□ 1.24
TREX1-205ENST00000625293 NAV1Q8NEY1 1877 aa22.79■■□□□ 1.24
TREX1-205ENST00000625293 CALM1P0DP23 149 aa22.78■■□□□ 1.24
TREX1-205ENST00000625293 CALM2P0DP24 149 aa22.78■■□□□ 1.24
TREX1-205ENST00000625293 CALM3P0DP25 149 aa22.78■■□□□ 1.24
TREX1-205ENST00000625293 RHBDL3P58872 404 aa22.78■■□□□ 1.24
TREX1-205ENST00000625293 ANP32BQ92688 251 aaKnown RBP22.78■■□□□ 1.24
TREX1-205ENST00000625293 RNF26Q9BY78 433 aaPredicted RBP22.78■■□□□ 1.24
TREX1-205ENST00000625293 GOLPH3LQ9H4A5 285 aa22.78■■□□□ 1.24
TREX1-205ENST00000625293 RBM28Q9NW13 759 aaKnown RBP22.78■■□□□ 1.24
TREX1-205ENST00000625293 SUGT1Q9Y2Z0 365 aa22.78■■□□□ 1.24
TREX1-205ENST00000625293 PRELPP51888 382 aa22.78■■□□□ 1.24
TREX1-205ENST00000625293 RASSF7Q02833 373 aa22.78■■□□□ 1.24
TREX1-205ENST00000625293 TRIM29Q14134 588 aa22.78■■□□□ 1.24
TREX1-205ENST00000625293 CCAR1Q8IX12 1150 aaKnown RBP22.78■■□□□ 1.24
TREX1-205ENST00000625293 SLF2Q8IX21 1173 aa22.78■■□□□ 1.24
TREX1-205ENST00000625293 CMTR1Q8N1G2 835 aaKnown RBP22.78■■□□□ 1.24
TREX1-205ENST00000625293 ENGASEQ8NFI3 743 aa22.78■■□□□ 1.24
TREX1-205ENST00000625293 KCNG4Q8TDN1 519 aa22.78■■□□□ 1.24
TREX1-205ENST00000625293 C7orf43Q8WVR3 580 aa22.78■■□□□ 1.24
TREX1-205ENST00000625293 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.78■■□□□ 1.24
TREX1-205ENST00000625293 PCDHA7Q9UN72 937 aa22.78■■□□□ 1.24
TREX1-205ENST00000625293 A0A1W2PQ27 194 aa22.77■■□□□ 1.24
TREX1-205ENST00000625293 A0A1W2PQ64 194 aa22.77■■□□□ 1.24
TREX1-205ENST00000625293 A0A1W2PQD8 194 aa22.77■■□□□ 1.24
TREX1-205ENST00000625293 RIMBP2O15034 1052 aa22.77■■□□□ 1.24
TREX1-205ENST00000625293 NMT2O60551 498 aa22.77■■□□□ 1.24
TREX1-205ENST00000625293 GTF2IP78347 998 aa22.77■■□□□ 1.24
TREX1-205ENST00000625293 UVSSAQ2YD98 709 aa22.77■■□□□ 1.24
TREX1-205ENST00000625293 ANO1Q5XXA6 986 aa22.77■■□□□ 1.24
TREX1-205ENST00000625293 RCSD1Q6JBY9 416 aa22.77■■□□□ 1.24
TREX1-205ENST00000625293 DPP8Q6V1X1 898 aaPredicted RBP22.77■■□□□ 1.24
TREX1-205ENST00000625293 TNMDQ9H2S6 317 aa22.77■■□□□ 1.24
TREX1-205ENST00000625293 ARFGEF1Q9Y6D6 1849 aa22.77■■□□□ 1.24
TREX1-205ENST00000625293 MMP1P03956 469 aa22.76■■□□□ 1.23
TREX1-205ENST00000625293 PLCG2P16885 1265 aa22.76■■□□□ 1.23
TREX1-205ENST00000625293 SNW1Q13573 536 aaKnown RBP22.76■■□□□ 1.23
TREX1-205ENST00000625293 ADALQ6DHV7 355 aa22.76■■□□□ 1.23
TREX1-205ENST00000625293 MAPKAPK5Q8IW41 473 aa22.76■■□□□ 1.23
TREX1-205ENST00000625293 ANKS1AQ92625 1134 aa22.76■■□□□ 1.23
TREX1-205ENST00000625293 DYNLL2Q96FJ2 89 aa22.76■■□□□ 1.23
TREX1-205ENST00000625293 ZC3H12CQ9C0D7 883 aaKnown RBP22.76■■□□□ 1.23
TREX1-205ENST00000625293 ME1P48163 572 aa22.76■■□□□ 1.23
TREX1-205ENST00000625293 STK38Q15208 465 aa22.76■■□□□ 1.23
TREX1-205ENST00000625293 CAMK4Q16566 473 aa22.76■■□□□ 1.23
TREX1-205ENST00000625293 CDK5RAP2Q96SN8 1893 aa22.75■■□□□ 1.23
TREX1-205ENST00000625293 TSPY2A6NKD2 308 aa22.75■■□□□ 1.23
TREX1-205ENST00000625293 SPTLC2O15270 562 aa22.75■■□□□ 1.23
TREX1-205ENST00000625293 PLCD1P51178 756 aa22.75■■□□□ 1.23
TREX1-205ENST00000625293 TMTC3Q6ZXV5 915 aa22.75■■□□□ 1.23
TREX1-205ENST00000625293 AMOTL1Q8IY63 956 aa22.75■■□□□ 1.23
TREX1-205ENST00000625293 TEX11Q8IYF3 940 aa22.75■■□□□ 1.23
TREX1-205ENST00000625293 CERS5Q8N5B7 392 aa22.75■■□□□ 1.23
TREX1-205ENST00000625293 DAGLAQ9Y4D2 1042 aa22.75■■□□□ 1.23
TREX1-205ENST00000625293 FLT1P17948 1338 aa22.75■■□□□ 1.23
TREX1-205ENST00000625293 NFKBIEO00221 500 aa22.74■■□□□ 1.23
TREX1-205ENST00000625293 PRPF3O43395 683 aaKnown RBP22.74■■□□□ 1.23
TREX1-205ENST00000625293 PLEKHA8P1O95397 391 aa22.74■■□□□ 1.23
TREX1-205ENST00000625293 CCDC192P0DO97 292 aa22.74■■□□□ 1.23
TREX1-205ENST00000625293 SLC39A14Q15043 492 aa22.74■■□□□ 1.23
TREX1-205ENST00000625293 PKN1Q16512 942 aa22.74■■□□□ 1.23
TREX1-205ENST00000625293 SLC4A8Q2Y0W8 1093 aa22.74■■□□□ 1.23
TREX1-205ENST00000625293 CCDC82Q8N4S0 544 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms