RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 MKRN1Q9UHC7 482 aaKnown RBP22.79■■□□□ 1.24
PCDHB11-202ENST00000624887 BTBD18B2RXH4 712 aa22.78■■□□□ 1.24
PCDHB11-202ENST00000624887 POLRMTO00411 1230 aaKnown RBP22.78■■□□□ 1.24
PCDHB11-202ENST00000624887 PDE4BQ07343 736 aa22.78■■□□□ 1.24
PCDHB11-202ENST00000624887 TROAPQ12815 778 aa22.78■■□□□ 1.24
PCDHB11-202ENST00000624887 DIS3L2Q8IYB7 885 aaKnown RBP22.78■■□□□ 1.24
PCDHB11-202ENST00000624887 SDF4Q9BRK5 362 aa22.78■■□□□ 1.24
PCDHB11-202ENST00000624887 DDAH1O94760 285 aa22.78■■□□□ 1.24
PCDHB11-202ENST00000624887 UFL1O94874 794 aa22.78■■□□□ 1.24
PCDHB11-202ENST00000624887 CYP2D6P10635 497 aa22.78■■□□□ 1.24
PCDHB11-202ENST00000624887 MARCKSP29966 332 aaPredicted RBP22.78■■□□□ 1.24
PCDHB11-202ENST00000624887 GPR101Q96P66 508 aaPredicted RBP22.78■■□□□ 1.24
PCDHB11-202ENST00000624887 GGA1Q9UJY5 639 aa22.78■■□□□ 1.24
PCDHB11-202ENST00000624887 KCNJ14Q9UNX9 436 aa22.78■■□□□ 1.24
PCDHB11-202ENST00000624887 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.78■■□□□ 1.24
PCDHB11-202ENST00000624887 KLRG2A4D1S0 409 aaPredicted RBP22.77■■□□□ 1.24
PCDHB11-202ENST00000624887 NT5C2P49902 561 aa22.77■■□□□ 1.24
PCDHB11-202ENST00000624887 FUT2Q10981 343 aa22.77■■□□□ 1.24
PCDHB11-202ENST00000624887 CD209Q9NNX6 404 aa22.77■■□□□ 1.24
PCDHB11-202ENST00000624887 MCM9Q9NXL9 1143 aa22.77■■□□□ 1.24
PCDHB11-202ENST00000624887 PODXL2Q9NZ53 605 aa22.77■■□□□ 1.24
PCDHB11-202ENST00000624887 ZNF202O95125 648 aa22.76■■□□□ 1.23
PCDHB11-202ENST00000624887 IL1R1P14778 569 aa22.76■■□□□ 1.23
PCDHB11-202ENST00000624887 PFKFB1P16118 471 aa22.76■■□□□ 1.23
PCDHB11-202ENST00000624887 PPP4CP60510 307 aa22.76■■□□□ 1.23
PCDHB11-202ENST00000624887 CRAMP1Q96RY5 1269 aa22.76■■□□□ 1.23
PCDHB11-202ENST00000624887 ANO10Q9NW15 660 aa22.76■■□□□ 1.23
PCDHB11-202ENST00000624887 BAG3O95817 575 aa22.76■■□□□ 1.23
PCDHB11-202ENST00000624887 LDHCP07864 332 aa22.76■■□□□ 1.23
PCDHB11-202ENST00000624887 AKAP17AQ02040 695 aaKnown RBP22.76■■□□□ 1.23
PCDHB11-202ENST00000624887 IQCB1Q15051 598 aa22.76■■□□□ 1.23
PCDHB11-202ENST00000624887 GRIK5Q16478 980 aa22.76■■□□□ 1.23
PCDHB11-202ENST00000624887 C11orf57Q6ZUT1 292 aaPredicted RBP22.76■■□□□ 1.23
PCDHB11-202ENST00000624887 MROH7-TTC4A0A0A0MT08 1334 aa22.75■■□□□ 1.23
PCDHB11-202ENST00000624887 RGPD3A6NKT7 1758 aaPredicted RBP22.75■■□□□ 1.23
PCDHB11-202ENST00000624887 RGPD4Q7Z3J3 1758 aa22.75■■□□□ 1.23
PCDHB11-202ENST00000624887 PRPF3O43395 683 aaKnown RBP22.75■■□□□ 1.23
PCDHB11-202ENST00000624887 USP17L8P0C7I0 530 aa22.75■■□□□ 1.23
PCDHB11-202ENST00000624887 USP5P45974 858 aa22.75■■□□□ 1.23
PCDHB11-202ENST00000624887 C12orf60Q5U649 245 aa22.75■■□□□ 1.23
PCDHB11-202ENST00000624887 COL23A1Q86Y22 540 aaPredicted RBP22.75■■□□□ 1.23
PCDHB11-202ENST00000624887 FLAD1Q8NFF5 587 aa22.75■■□□□ 1.23
PCDHB11-202ENST00000624887 SH3RF3Q8TEJ3 882 aaPredicted RBP22.75■■□□□ 1.23
PCDHB11-202ENST00000624887 FAM237AA0A1B0GTK4 181 aa22.74■■□□□ 1.23
PCDHB11-202ENST00000624887 DIXDC1Q155Q3 683 aa22.74■■□□□ 1.23
PCDHB11-202ENST00000624887 PKN1Q16512 942 aa22.74■■□□□ 1.23
PCDHB11-202ENST00000624887 RILPL1Q5EBL4 403 aa22.74■■□□□ 1.23
PCDHB11-202ENST00000624887 FAM47AQ5JRC9 791 aa22.74■■□□□ 1.23
PCDHB11-202ENST00000624887 KIAA1468Q9P260 1216 aa22.74■■□□□ 1.23
PCDHB11-202ENST00000624887 HPSEQ9Y251 543 aa22.74■■□□□ 1.23
PCDHB11-202ENST00000624887 XBP1P17861 261 aa22.74■■□□□ 1.23
PCDHB11-202ENST00000624887 TOB1P50616 345 aaPredicted RBP22.74■■□□□ 1.23
PCDHB11-202ENST00000624887 TIGD1Q96MW7 591 aa22.74■■□□□ 1.23
PCDHB11-202ENST00000624887 TSPY2A6NKD2 308 aa22.73■■□□□ 1.23
PCDHB11-202ENST00000624887 NMT2O60551 498 aa22.73■■□□□ 1.23
PCDHB11-202ENST00000624887 CUTAO60888 179 aa22.73■■□□□ 1.23
PCDHB11-202ENST00000624887 PLEKHA8P1O95397 391 aa22.73■■□□□ 1.23
PCDHB11-202ENST00000624887 SHC4Q6S5L8 630 aa22.73■■□□□ 1.23
PCDHB11-202ENST00000624887 TMTC3Q6ZXV5 915 aa22.73■■□□□ 1.23
PCDHB11-202ENST00000624887 CERS3Q8IU89 383 aa22.73■■□□□ 1.23
PCDHB11-202ENST00000624887 NOL10Q9BSC4 688 aaKnown RBP22.73■■□□□ 1.23
PCDHB11-202ENST00000624887 ROBO3Q96MS0 1386 aa22.73■■□□□ 1.23
PCDHB11-202ENST00000624887 RESP18Q5W5W9 173 aa22.72■■□□□ 1.23
PCDHB11-202ENST00000624887 LRRC37AA6NMS7 1700 aa22.72■■□□□ 1.23
PCDHB11-202ENST00000624887 SYKP43405 635 aa22.72■■□□□ 1.23
PCDHB11-202ENST00000624887 NR5A1Q13285 461 aa22.72■■□□□ 1.23
PCDHB11-202ENST00000624887 LTBP1Q14766 1721 aa22.72■■□□□ 1.23
PCDHB11-202ENST00000624887 TMC4Q7Z404 712 aa22.72■■□□□ 1.23
PCDHB11-202ENST00000624887 NLGN1Q8N2Q7 840 aa22.72■■□□□ 1.23
PCDHB11-202ENST00000624887 MPNDQ8N594 471 aa22.72■■□□□ 1.23
PCDHB11-202ENST00000624887 TBC1D16Q8TBP0 767 aa22.72■■□□□ 1.23
PCDHB11-202ENST00000624887 ERCC4Q92889 916 aaPredicted RBP22.72■■□□□ 1.23
PCDHB11-202ENST00000624887 RTFDC1Q9BY42 306 aaPredicted RBP22.72■■□□□ 1.23
PCDHB11-202ENST00000624887 POLLQ9UGP5 575 aa22.72■■□□□ 1.23
PCDHB11-202ENST00000624887 GOLGA6L19H0YKK7 550 aa22.71■■□□□ 1.23
PCDHB11-202ENST00000624887 PLA2G4DQ86XP0 818 aa22.71■■□□□ 1.23
PCDHB11-202ENST00000624887 CTCFLQ8NI51 663 aaPredicted RBP22.71■■□□□ 1.23
PCDHB11-202ENST00000624887 SHISA4Q96DD7 197 aa22.71■■□□□ 1.23
PCDHB11-202ENST00000624887 PHF20Q9BVI0 1012 aa22.71■■□□□ 1.23
PCDHB11-202ENST00000624887 V9GY48 417 aaPredicted RBP22.71■■□□□ 1.23
PCDHB11-202ENST00000624887 NAV1Q8NEY1 1877 aa22.71■■□□□ 1.23
PCDHB11-202ENST00000624887 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.7■■□□□ 1.23
PCDHB11-202ENST00000624887 GOLGA6L6A8MZA4 724 aa22.7■■□□□ 1.23
PCDHB11-202ENST00000624887 OFD1O75665 1012 aa22.7■■□□□ 1.23
PCDHB11-202ENST00000624887 TPM3P06753 285 aa22.7■■□□□ 1.23
PCDHB11-202ENST00000624887 RCSD1Q6JBY9 416 aa22.7■■□□□ 1.23
PCDHB11-202ENST00000624887 CEP57L1Q8IYX8 460 aa22.7■■□□□ 1.23
PCDHB11-202ENST00000624887 KRI1Q8N9T8 703 aaKnown RBP22.7■■□□□ 1.23
PCDHB11-202ENST00000624887 OXER1Q8TDS5 423 aa22.7■■□□□ 1.23
PCDHB11-202ENST00000624887 ZNF75DP51815 510 aa22.7■■□□□ 1.22
PCDHB11-202ENST00000624887 AMOTL1Q8IY63 956 aa22.7■■□□□ 1.22
PCDHB11-202ENST00000624887 ZNF830Q96NB3 372 aaPredicted RBP22.7■■□□□ 1.22
PCDHB11-202ENST00000624887 CLIC6Q96NY7 704 aa22.7■■□□□ 1.22
PCDHB11-202ENST00000624887 CAMKK2Q96RR4 588 aa22.7■■□□□ 1.22
PCDHB11-202ENST00000624887 NAT10Q9H0A0 1025 aaKnown RBP22.7■■□□□ 1.22
PCDHB11-202ENST00000624887 VPS54Q9P1Q0 977 aa22.7■■□□□ 1.22
PCDHB11-202ENST00000624887 CNTNAP5Q8WYK1 1306 aa22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 SARM1Q6SZW1 724 aa22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.69■■□□□ 1.22
PCDHB11-202ENST00000624887 DGKHQ86XP1 1220 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms