RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 CTGFP29279 349 aa30.48■■■□□ 2.47
VEGFA-229ENST00000621747 ADD2P35612 726 aa30.48■■■□□ 2.47
VEGFA-229ENST00000621747 FCGRTP55899 365 aa30.48■■■□□ 2.47
VEGFA-229ENST00000621747 BACE1P56817 501 aa30.48■■■□□ 2.47
VEGFA-229ENST00000621747 JAG1P78504 1218 aa30.48■■■□□ 2.47
VEGFA-229ENST00000621747 TATDN1Q6P1N9 297 aa30.48■■■□□ 2.47
VEGFA-229ENST00000621747 GPATCH3Q96I76 525 aa30.48■■■□□ 2.47
VEGFA-229ENST00000621747 ZNF333Q96JL9 665 aa30.48■■■□□ 2.47
VEGFA-229ENST00000621747 ECHDC1Q9NTX5 307 aa30.48■■■□□ 2.47
VEGFA-229ENST00000621747 LOC285556D6RIA3 1793 aa30.48■■■□□ 2.47
VEGFA-229ENST00000621747 OSBPP22059 807 aa30.47■■■□□ 2.47
VEGFA-229ENST00000621747 MTMR2Q13614 643 aa30.47■■■□□ 2.47
VEGFA-229ENST00000621747 TMOD4Q9NZQ9 345 aa30.47■■■□□ 2.47
VEGFA-229ENST00000621747 C19orf81C9J6K1 198 aa30.46■■■□□ 2.47
VEGFA-229ENST00000621747 LCORLQ8N3X6 602 aa30.46■■■□□ 2.47
VEGFA-229ENST00000621747 USP17L10C9JJH3 530 aa30.45■■■□□ 2.47
VEGFA-229ENST00000621747 SHROOM1Q2M3G4 852 aaPredicted RBP30.45■■■□□ 2.47
VEGFA-229ENST00000621747 ZSCAN25Q6NSZ9 544 aa30.45■■■□□ 2.47
VEGFA-229ENST00000621747 MCM9Q9NXL9 1143 aa30.45■■■□□ 2.47
VEGFA-229ENST00000621747 PCDHB15Q9Y5E8 787 aa30.45■■■□□ 2.47
VEGFA-229ENST00000621747 MYPNQ86TC9 1320 aa30.45■■■□□ 2.46
VEGFA-229ENST00000621747 GH2P01242 217 aa30.44■■■□□ 2.46
VEGFA-229ENST00000621747 PLCD1P51178 756 aa30.44■■■□□ 2.46
VEGFA-229ENST00000621747 CERKLQ49MI3 558 aaPredicted RBP30.44■■■□□ 2.46
VEGFA-229ENST00000621747 RAET1EQ8TD07 263 aa30.44■■■□□ 2.46
VEGFA-229ENST00000621747 SDR42E1Q8WUS8 393 aa30.44■■■□□ 2.46
VEGFA-229ENST00000621747 TMEM106CQ9BVX2 250 aa30.44■■■□□ 2.46
VEGFA-229ENST00000621747 ARMT1Q9H993 441 aa30.44■■■□□ 2.46
VEGFA-229ENST00000621747 DDX60LQ5H9U9 1706 aaKnown RBP30.44■■■□□ 2.46
VEGFA-229ENST00000621747 NAV1Q8NEY1 1877 aa30.44■■■□□ 2.46
VEGFA-229ENST00000621747 POTEFA5A3E0 1075 aa30.43■■■□□ 2.46
VEGFA-229ENST00000621747 GCLCP48506 637 aaPredicted RBP30.43■■■□□ 2.46
VEGFA-229ENST00000621747 UBE3CQ15386 1083 aa30.43■■■□□ 2.46
VEGFA-229ENST00000621747 ANKRD13CQ8N6S4 541 aa30.43■■■□□ 2.46
VEGFA-229ENST00000621747 DCP1AQ9NPI6 582 aaPredicted RBP30.43■■■□□ 2.46
VEGFA-229ENST00000621747 MBD4O95243 580 aa30.42■■■□□ 2.46
VEGFA-229ENST00000621747 FAM110CQ1W6H9 321 aa30.42■■■□□ 2.46
VEGFA-229ENST00000621747 SH3TC2Q8TF17 1288 aa30.42■■■□□ 2.46
VEGFA-229ENST00000621747 ASCC2Q9H1I8 757 aaPredicted RBP30.42■■■□□ 2.46
VEGFA-229ENST00000621747 CABP5Q9NP86 173 aa30.42■■■□□ 2.46
VEGFA-229ENST00000621747 ABCB5Q2M3G0 1257 aa30.41■■■□□ 2.46
VEGFA-229ENST00000621747 ATP8A2Q9NTI2 1148 aa30.41■■■□□ 2.46
VEGFA-229ENST00000621747 SHMT1P34896 483 aa30.4■■■□□ 2.46
VEGFA-229ENST00000621747 IRX3P78415 501 aaPredicted RBP30.4■■■□□ 2.46
VEGFA-229ENST00000621747 PRKCZQ05513 592 aa30.4■■■□□ 2.46
VEGFA-229ENST00000621747 RAB3GAP1Q15042 981 aa30.4■■■□□ 2.46
VEGFA-229ENST00000621747 SLFNL1Q499Z3 407 aa30.4■■■□□ 2.46
VEGFA-229ENST00000621747 RBBP6Q7Z6E9 1792 aaKnown RBP30.39■■■□□ 2.46
VEGFA-229ENST00000621747 TNPO2O14787 897 aaKnown RBP30.39■■■□□ 2.46
VEGFA-229ENST00000621747 HOXA7P31268 230 aaPredicted RBP30.39■■■□□ 2.46
VEGFA-229ENST00000621747 GABPAQ06546 454 aa30.39■■■□□ 2.46
VEGFA-229ENST00000621747 USP17L2Q6R6M4 530 aa30.39■■■□□ 2.46
VEGFA-229ENST00000621747 TAOK2Q9UL54 1235 aa30.39■■■□□ 2.46
VEGFA-229ENST00000621747 GRK4P32298 578 aa30.38■■■□□ 2.45
VEGFA-229ENST00000621747 DDRGK1Q96HY6 314 aa30.38■■■□□ 2.45
VEGFA-229ENST00000621747 CRBNQ96SW2 442 aa30.38■■■□□ 2.45
VEGFA-229ENST00000621747 FEZ1Q99689 392 aa30.38■■■□□ 2.45
VEGFA-229ENST00000621747 CENPFP49454 3210 aa30.37■■■□□ 2.45
VEGFA-229ENST00000621747 AMOTL1Q8IY63 956 aa30.37■■■□□ 2.45
VEGFA-229ENST00000621747 MGAMO43451 1857 aa30.37■■■□□ 2.45
VEGFA-229ENST00000621747 PRKAB2O43741 272 aa30.36■■■□□ 2.45
VEGFA-229ENST00000621747 KBTBD3Q8NAB2 608 aa30.36■■■□□ 2.45
VEGFA-229ENST00000621747 COA7Q96BR5 231 aa30.36■■■□□ 2.45
VEGFA-229ENST00000621747 EMILIN3Q9NT22 766 aa30.36■■■□□ 2.45
VEGFA-229ENST00000621747 SWAP70Q9UH65 585 aa30.36■■■□□ 2.45
VEGFA-229ENST00000621747 GABRQQ9UN88 632 aa30.36■■■□□ 2.45
VEGFA-229ENST00000621747 MYCP01106 439 aaPredicted RBP30.35■■■□□ 2.45
VEGFA-229ENST00000621747 CHGBP05060 677 aa30.35■■■□□ 2.45
VEGFA-229ENST00000621747 USP14P54578 494 aa30.35■■■□□ 2.45
VEGFA-229ENST00000621747 TSHZ3Q63HK5 1081 aa30.35■■■□□ 2.45
VEGFA-229ENST00000621747 SLAIN1Q8ND83 568 aa30.35■■■□□ 2.45
VEGFA-229ENST00000621747 TTC41PQ6P2S7 1318 aa30.35■■■□□ 2.45
VEGFA-229ENST00000621747 MYH7P12883 1935 aa30.35■■■□□ 2.45
VEGFA-229ENST00000621747 CYP2D6P10635 497 aa30.34■■■□□ 2.45
VEGFA-229ENST00000621747 EN2P19622 333 aaPredicted RBP30.34■■■□□ 2.45
VEGFA-229ENST00000621747 C12orf42Q96LP6 360 aa30.34■■■□□ 2.45
VEGFA-229ENST00000621747 PUS7LQ9H0K6 701 aaKnown RBP30.34■■■□□ 2.45
VEGFA-229ENST00000621747 SLC4A4Q9Y6R1 1079 aa30.34■■■□□ 2.45
VEGFA-229ENST00000621747 TNRC18O15417 2968 aaPredicted RBP30.33■■■□□ 2.45
VEGFA-229ENST00000621747 ERC2O15083 957 aa30.33■■■□□ 2.45
VEGFA-229ENST00000621747 FLT3LGP49771 235 aa30.33■■■□□ 2.45
VEGFA-229ENST00000621747 EVX2Q03828 476 aa30.33■■■□□ 2.45
VEGFA-229ENST00000621747 ZYXQ15942 572 aaKnown RBP30.33■■■□□ 2.45
VEGFA-229ENST00000621747 P2RX7Q99572 595 aaKnown RBP30.33■■■□□ 2.45
VEGFA-229ENST00000621747 KIAA1683Q9H0B3 1180 aa30.33■■■□□ 2.45
VEGFA-229ENST00000621747 MORF4L1Q9UBU8 362 aa30.33■■■□□ 2.45
VEGFA-229ENST00000621747 BIN2Q9UBW5 565 aaPredicted RBP30.33■■■□□ 2.45
VEGFA-229ENST00000621747 ZBTB47Q9UFB7 747 aaPredicted RBP30.33■■■□□ 2.45
VEGFA-229ENST00000621747 MPHOSPH10O00566 681 aaKnown RBP30.32■■■□□ 2.44
VEGFA-229ENST00000621747 HERVK_113P62684 666 aa30.32■■■□□ 2.44
VEGFA-229ENST00000621747 UBXN2AP68543 259 aa30.32■■■□□ 2.44
VEGFA-229ENST00000621747 GTF3C2Q8WUA4 911 aaPredicted RBP30.32■■■□□ 2.44
VEGFA-229ENST00000621747 IRF5Q13568 498 aa30.31■■■□□ 2.44
VEGFA-229ENST00000621747 LRRFIP1Q32MZ4 808 aaKnown RBP30.31■■■□□ 2.44
VEGFA-229ENST00000621747 ADCY3O60266 1144 aa30.3■■■□□ 2.44
VEGFA-229ENST00000621747 ZFYP08048 801 aaPredicted RBP30.3■■■□□ 2.44
VEGFA-229ENST00000621747 SEPT2Q15019 361 aa30.3■■■□□ 2.44
VEGFA-229ENST00000621747 C12orf60Q5U649 245 aa30.3■■■□□ 2.44
VEGFA-229ENST00000621747 ACER1Q8TDN7 264 aa30.3■■■□□ 2.44
VEGFA-229ENST00000621747 APPBP2Q92624 585 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms