RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 ATP2A2P16615 1042 aaKnown RBP10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 TERF1P54274 439 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 ICA1Q05084 483 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 CTDSPL2Q05D32 466 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 RASA3Q14644 834 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 SNX29Q8TEQ0 813 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 AP5M1Q9H0R1 490 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 PRPF6O94906 941 aaKnown RBP10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 KRT9P35527 623 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 GYG1P46976 350 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 CNNM4Q6P4Q7 775 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 ZBTB38Q8NAP3 1195 aaPredicted RBP10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 DEPTORQ8TB45 409 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 CCDC114Q96M63 670 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 TESK2Q96S53 571 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 DACT1Q9NYF0 836 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 GAS7O60861 476 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 CHMLP26374 656 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 ANO3Q9BYT9 981 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 P4HA1P13674 534 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 ZBTB8OSQ8IWT0 167 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 ADPGKQ9BRR6 497 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 RIOK1Q9BRS2 568 aaKnown RBP10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 AGTPBP1Q9UPW5 1226 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 TMOD1P28289 359 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 CC2D2BQ6DHV5 1058 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 MIER3Q7Z3K6 550 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 ABI1Q8IZP0 508 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 REXO1Q8N1G1 1221 aaKnown RBP10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 MYCT1Q8N699 235 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 CEP63Q96MT8 703 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 CD2APQ9Y5K6 639 aa10.94□□□□□ -0.66
CLTCL1-211ENST00000621271 ERBB4Q15303 1308 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 CLRN2A0PK11 232 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 CETN3O15182 167 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 BBOX1O75936 387 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 CD19P15391 556 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 ARID4AP29374 1257 aaPredicted RBP10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 BTDP43251 543 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 LIN9Q5TKA1 542 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 RSPH3Q86UC2 560 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 TNNQ9UQP3 1299 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 SKILP12757 684 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 DNM1Q05193 864 aaKnown RBP10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 CFAP58Q5T655 872 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 MCTP2Q6DN12 878 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 LEO1Q8WVC0 666 aaPredicted RBP10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 ZNF804BA4D1E1 1349 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 ZNF335Q9H4Z2 1342 aaPredicted RBP10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 KRT86O43790 486 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 ZEB2O60315 1214 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 GABPAQ06546 454 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 CALCRLQ16602 461 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 ANO6Q4KMQ2 910 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 FAM47AQ5JRC9 791 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 MAP3K15Q6ZN16 1313 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 NEURL1BA8MQ27 555 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 USP17L12C9JPN9 530 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 USP17L21D6R901 530 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 POLR2MP0CAP2 368 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 IREB2P48200 963 aaKnown RBP10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 FAM204AQ9H8W3 233 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 ZBTB40Q9NUA8 1239 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 RTEL1Q9NZ71 1219 aa10.93□□□□□ -0.66
CLTCL1-211ENST00000621271 E7EVH7 732 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 PCCAP05165 728 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 IL6STP40189 918 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 USP14P54578 494 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 INF2Q27J81 1249 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 SPECC1LQ69YQ0 1117 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 AOPEPQ8N6M6 819 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 GABPB2Q8TAK5 448 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 ATP8A2Q9NTI2 1148 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 MTUS1Q9ULD2 1270 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 LEMD3Q9Y2U8 911 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 PER1O15534 1290 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 ABCB5Q2M3G0 1257 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 HERC4Q5GLZ8 1057 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 TTC38Q5R3I4 469 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 EXOC3O60645 756 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 STK10O94804 968 aaKnown RBP10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 BCAMP50895 628 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 CHRNDQ07001 517 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 ERFEQ4G0M1 354 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 RTKN2Q8IZC4 609 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 TTLL6Q8N841 843 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 INTS4Q96HW7 963 aaKnown RBP10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 GIGYF1O75420 1035 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 TUBB4AP04350 444 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 TNFAIP3P21580 790 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 YARSP54577 528 aaKnown RBP10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 PPARAQ07869 468 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 C6orf163Q5TEZ5 329 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 CTR9Q6PD62 1173 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 TTLL7Q6ZT98 887 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 GSDMBQ8TAX9 411 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 CSRNP1Q96S65 589 aa10.92□□□□□ -0.66
CLTCL1-211ENST00000621271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.92□□□□□ -0.662e-6■■■□□ 16.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms