RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 EXOC5O00471 708 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 SSRP1Q08945 709 aaKnown RBP7.54□□□□□ -1.2
LMO3-235ENST00000616247 WHAMMP3Q1A5X7 153 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 ZMYM1Q5SVZ6 1142 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 CNGA4Q8IV77 575 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 ANKRD18AQ8IVF6 992 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 AIDAQ96BJ3 306 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 BABAM1Q9NWV8 329 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 WWC3Q9ULE0 1092 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 TTF2Q9UNY4 1162 aaKnown RBP7.54□□□□□ -1.2
LMO3-235ENST00000616247 FRMD3A2A2Y4 597 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 HOXB7P09629 217 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 HNRNPH1P31943 449 aaKnown RBP7.54□□□□□ -1.2
LMO3-235ENST00000616247 UBXN1Q04323 297 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 NR5A1Q13285 461 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 AKAP4Q5JQC9 854 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 IQUBQ8NA54 791 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 CTCFLQ8NI51 663 aaPredicted RBP7.54□□□□□ -1.2
LMO3-235ENST00000616247 ENOX1Q8TC92 643 aaKnown RBP7.54□□□□□ -1.2
LMO3-235ENST00000616247 HNRNPLLQ8WVV9 542 aaKnown RBP7.54□□□□□ -1.2
LMO3-235ENST00000616247 MMS19Q96T76 1030 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 CHP1Q99653 195 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 CAPS2Q9BXY5 557 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 YY1AP1Q9H869 796 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 SENP2Q9HC62 589 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 COPRSQ9NQ92 184 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 SLC12A7Q9Y666 1083 aa7.54□□□□□ -1.2
LMO3-235ENST00000616247 RIMS1Q86UR5 1692 aaKnown RBP7.53□□□□□ -1.2
LMO3-235ENST00000616247 ZNF185O15231 689 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 MFAP3LO75121 409 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 CSB-PGBD3P0DP91 1061 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 SLC7A5Q01650 507 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 C2orf54Q08AI8 447 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 PDCLQ13371 301 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 CCDC181Q5TID7 509 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 RESP18Q5W5W9 173 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 TRIM22Q8IYM9 498 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 ZBTB3Q9H5J0 574 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 NLRP2Q9NX02 1062 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 SAR1BQ9Y6B6 198 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 ANKRD26Q9UPS8 1709 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 NEDD4P46934 1319 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 MYO1FO00160 1098 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 ZPR1O75312 459 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 TBX2Q13207 712 aaPredicted RBP7.53□□□□□ -1.2
LMO3-235ENST00000616247 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.53□□□□□ -1.2
LMO3-235ENST00000616247 MSANTD4Q8NCY6 345 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 PUS3Q9BZE2 481 aaKnown RBP7.53□□□□□ -1.2
LMO3-235ENST00000616247 ANGEL1Q9UNK9 670 aaKnown RBP7.53□□□□□ -1.2
LMO3-235ENST00000616247 HPS5Q9UPZ3 1129 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 PCDHB6Q9Y5E3 794 aa7.53□□□□□ -1.2
LMO3-235ENST00000616247 GPAA1O43292 621 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 PPP6R2O75170 966 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 IDEP14735 1019 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 PLCD1P51178 756 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 IRAK1P51617 712 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 CDR1P51861 262 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 NR1I3Q14994 352 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 ARHGEF25Q86VW2 580 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 TMTC1Q8IUR5 882 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 KAT2BQ92831 832 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 EPSTI1Q96J88 318 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 PANX2Q96RD6 677 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 METTL22Q9BUU2 404 aaPredicted RBP7.52□□□□□ -1.21
LMO3-235ENST00000616247 SELENOOQ9BVL4 669 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 PUS7LQ9H0K6 701 aaKnown RBP7.52□□□□□ -1.21
LMO3-235ENST00000616247 RAB21Q9UL25 225 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 EPN1Q9Y6I3 576 aaPredicted RBP7.52□□□□□ -1.21
LMO3-235ENST00000616247 SALL1Q9NSC2 1324 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 ATP1A1P05023 1023 aaKnown RBP7.52□□□□□ -1.21
LMO3-235ENST00000616247 ADORA1P30542 326 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 CXCR5P32302 372 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 ZAP70P43403 619 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 RNASE9P60153 205 aaKnown RBP7.52□□□□□ -1.21
LMO3-235ENST00000616247 PPARAQ07869 468 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 ACTN3Q08043 901 aaPredicted RBP7.52□□□□□ -1.21
LMO3-235ENST00000616247 CYP26C1Q6V0L0 522 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 JAKMIP2Q96AA8 810 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 CSRNP2Q9H175 543 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 HPCAL4Q9UM19 191 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 EID1Q9Y6B2 187 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 SYF2O95926 243 aaKnown RBP7.52□□□□□ -1.21
LMO3-235ENST00000616247 ERCC3P19447 782 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 MCM3P25205 808 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 CYP27A1Q02318 531 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 SPATA1Q5VX52 437 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 SH2D3CQ8N5H7 860 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 COG1Q8WTW3 980 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 IFT81Q8WYA0 676 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 SCLT1Q96NL6 688 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 PLIN2Q99541 437 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 ZNHIT6Q9NWK9 470 aaKnown RBP7.52□□□□□ -1.21
LMO3-235ENST00000616247 BCCIPQ9P287 314 aaKnown RBP eCLIP7.52□□□□□ -1.21
LMO3-235ENST00000616247 HPSEQ9Y251 543 aa7.52□□□□□ -1.21
LMO3-235ENST00000616247 SH3TC1Q8TE82 1336 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 OVOS2A0A0J9YW53 1432 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 OVOS2Q6IE36 1432 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 GYPCP04921 128 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 TUBBP07437 444 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 CCDC172P0C7W6 258 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms