RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 GDF11O95390 407 aa22■■□□□ 1.11
VCX3A-203ENST00000612369 FMNL1O95466 1100 aaPredicted RBP22■■□□□ 1.11
VCX3A-203ENST00000612369 POLR3DP05423 398 aaPredicted RBP22■■□□□ 1.11
VCX3A-203ENST00000612369 UBE3CQ15386 1083 aa22■■□□□ 1.11
VCX3A-203ENST00000612369 SLC4A8Q2Y0W8 1093 aa22■■□□□ 1.11
VCX3A-203ENST00000612369 TREML2Q5T2D2 321 aa22■■□□□ 1.11
VCX3A-203ENST00000612369 TRIM47Q96LD4 638 aa22■■□□□ 1.11
VCX3A-203ENST00000612369 SRRDQ9UH36 339 aa22■■□□□ 1.11
VCX3A-203ENST00000612369 USP17L10C9JJH3 530 aa21.99■■□□□ 1.11
VCX3A-203ENST00000612369 OSBPP22059 807 aa21.99■■□□□ 1.11
VCX3A-203ENST00000612369 CTGFP29279 349 aa21.99■■□□□ 1.11
VCX3A-203ENST00000612369 FCGRTP55899 365 aa21.99■■□□□ 1.11
VCX3A-203ENST00000612369 JAG1P78504 1218 aa21.99■■□□□ 1.11
VCX3A-203ENST00000612369 ZNF333Q96JL9 665 aa21.99■■□□□ 1.11
VCX3A-203ENST00000612369 YTHDC1Q96MU7 727 aaKnown RBP21.99■■□□□ 1.11
VCX3A-203ENST00000612369 TMOD4Q9NZQ9 345 aa21.99■■□□□ 1.11
VCX3A-203ENST00000612369 GCLCP48506 637 aaPredicted RBP21.98■■□□□ 1.11
VCX3A-203ENST00000612369 PLCD1P51178 756 aa21.98■■□□□ 1.11
VCX3A-203ENST00000612369 MTMR2Q13614 643 aa21.98■■□□□ 1.11
VCX3A-203ENST00000612369 CERKLQ49MI3 558 aaPredicted RBP21.98■■□□□ 1.11
VCX3A-203ENST00000612369 LCORLQ8N3X6 602 aa21.98■■□□□ 1.11
VCX3A-203ENST00000612369 DCP1AQ9NPI6 582 aaPredicted RBP21.98■■□□□ 1.11
VCX3A-203ENST00000612369 ATP8A2Q9NTI2 1148 aa21.98■■□□□ 1.11
VCX3A-203ENST00000612369 MCM9Q9NXL9 1143 aa21.98■■□□□ 1.11
VCX3A-203ENST00000612369 DDX60LQ5H9U9 1706 aaKnown RBP21.97■■□□□ 1.11
VCX3A-203ENST00000612369 ZSWIM8A7E2V4 1837 aa21.97■■□□□ 1.11
VCX3A-203ENST00000612369 NAV1Q8NEY1 1877 aa21.97■■□□□ 1.11
VCX3A-203ENST00000612369 GH2P01242 217 aa21.97■■□□□ 1.11
VCX3A-203ENST00000612369 FAM110CQ1W6H9 321 aa21.97■■□□□ 1.11
VCX3A-203ENST00000612369 SDR42E1Q8WUS8 393 aa21.97■■□□□ 1.11
VCX3A-203ENST00000612369 TMEM106CQ9BVX2 250 aa21.97■■□□□ 1.11
VCX3A-203ENST00000612369 ARMT1Q9H993 441 aa21.97■■□□□ 1.11
VCX3A-203ENST00000612369 CENPFP49454 3210 aa21.96■■□□□ 1.11
VCX3A-203ENST00000612369 MBD4O95243 580 aa21.96■■□□□ 1.11
VCX3A-203ENST00000612369 HOXA7P31268 230 aaPredicted RBP21.96■■□□□ 1.11
VCX3A-203ENST00000612369 GABPAQ06546 454 aa21.96■■□□□ 1.11
VCX3A-203ENST00000612369 AAMPQ13685 434 aa21.96■■□□□ 1.11
VCX3A-203ENST00000612369 ABCB5Q2M3G0 1257 aa21.96■■□□□ 1.11
VCX3A-203ENST00000612369 CABP5Q9NP86 173 aa21.96■■□□□ 1.11
VCX3A-203ENST00000612369 MYPNQ86TC9 1320 aa21.96■■□□□ 1.11
VCX3A-203ENST00000612369 MYH7P12883 1935 aa21.96■■□□□ 1.11
VCX3A-203ENST00000612369 SHMT1P34896 483 aa21.95■■□□□ 1.1
VCX3A-203ENST00000612369 SHROOM1Q2M3G4 852 aaPredicted RBP21.95■■□□□ 1.1
VCX3A-203ENST00000612369 RAET1EQ8TD07 263 aa21.95■■□□□ 1.1
VCX3A-203ENST00000612369 ASCC2Q9H1I8 757 aaPredicted RBP21.95■■□□□ 1.1
VCX3A-203ENST00000612369 RBBP6Q7Z6E9 1792 aaKnown RBP21.94■■□□□ 1.1
VCX3A-203ENST00000612369 MGAMO43451 1857 aa21.94■■□□□ 1.1
VCX3A-203ENST00000612369 ECM2O94769 699 aaPredicted RBP21.94■■□□□ 1.1
VCX3A-203ENST00000612369 USP17L2Q6R6M4 530 aa21.94■■□□□ 1.1
VCX3A-203ENST00000612369 AMOTL1Q8IY63 956 aa21.94■■□□□ 1.1
VCX3A-203ENST00000612369 ANKRD13CQ8N6S4 541 aa21.94■■□□□ 1.1
VCX3A-203ENST00000612369 KBTBD3Q8NAB2 608 aa21.94■■□□□ 1.1
VCX3A-203ENST00000612369 DDRGK1Q96HY6 314 aa21.94■■□□□ 1.1
VCX3A-203ENST00000612369 CRBNQ96SW2 442 aa21.94■■□□□ 1.1
VCX3A-203ENST00000612369 SWAP70Q9UH65 585 aa21.94■■□□□ 1.1
VCX3A-203ENST00000612369 TTC41PQ6P2S7 1318 aa21.94■■□□□ 1.1
VCX3A-203ENST00000612369 ERC2O15083 957 aa21.93■■□□□ 1.1
VCX3A-203ENST00000612369 TNRC18O15417 2968 aaPredicted RBP21.93■■□□□ 1.1
VCX3A-203ENST00000612369 USP14P54578 494 aa21.93■■□□□ 1.1
VCX3A-203ENST00000612369 IRX3P78415 501 aaPredicted RBP21.93■■□□□ 1.1
VCX3A-203ENST00000612369 POTEFA5A3E0 1075 aa21.92■■□□□ 1.1
VCX3A-203ENST00000612369 TNPO2O14787 897 aaKnown RBP21.92■■□□□ 1.1
VCX3A-203ENST00000612369 GRK4P32298 578 aa21.92■■□□□ 1.1
VCX3A-203ENST00000612369 PRKCZQ05513 592 aa21.92■■□□□ 1.1
VCX3A-203ENST00000612369 RAB3GAP1Q15042 981 aa21.92■■□□□ 1.1
VCX3A-203ENST00000612369 LRRFIP1Q32MZ4 808 aaKnown RBP21.92■■□□□ 1.1
VCX3A-203ENST00000612369 SLFNL1Q499Z3 407 aa21.92■■□□□ 1.1
VCX3A-203ENST00000612369 SH3TC2Q8TF17 1288 aa21.92■■□□□ 1.1
VCX3A-203ENST00000612369 C12orf42Q96LP6 360 aa21.92■■□□□ 1.1
VCX3A-203ENST00000612369 EMILIN3Q9NT22 766 aa21.92■■□□□ 1.1
VCX3A-203ENST00000612369 KIAA0100Q14667 2235 aaKnown RBP21.92■■□□□ 1.1
VCX3A-203ENST00000612369 PRKAB2O43741 272 aa21.91■■□□□ 1.1
VCX3A-203ENST00000612369 ZFYP08048 801 aaPredicted RBP21.91■■□□□ 1.1
VCX3A-203ENST00000612369 GTF3C2Q8WUA4 911 aaPredicted RBP21.91■■□□□ 1.1
VCX3A-203ENST00000612369 COA7Q96BR5 231 aa21.91■■□□□ 1.1
VCX3A-203ENST00000612369 KIAA1683Q9H0B3 1180 aa21.91■■□□□ 1.1
VCX3A-203ENST00000612369 PUS7LQ9H0K6 701 aaKnown RBP21.91■■□□□ 1.1
VCX3A-203ENST00000612369 MORF4L1Q9UBU8 362 aa21.91■■□□□ 1.1
VCX3A-203ENST00000612369 ZBTB47Q9UFB7 747 aaPredicted RBP21.91■■□□□ 1.1
VCX3A-203ENST00000612369 GLRX3O76003 335 aaKnown RBP21.9■■□□□ 1.1
VCX3A-203ENST00000612369 HDAC1Q13547 482 aaPredicted RBP21.9■■□□□ 1.1
VCX3A-203ENST00000612369 SLAIN1Q8ND83 568 aa21.9■■□□□ 1.1
VCX3A-203ENST00000612369 GCC1Q96CN9 775 aa21.9■■□□□ 1.1
VCX3A-203ENST00000612369 FEZ1Q99689 392 aa21.9■■□□□ 1.1
VCX3A-203ENST00000612369 SLC4A4Q9Y6R1 1079 aa21.9■■□□□ 1.1
VCX3A-203ENST00000612369 RNF113AO15541 343 aaKnown RBP21.89■■□□□ 1.09
VCX3A-203ENST00000612369 CHGBP05060 677 aa21.89■■□□□ 1.09
VCX3A-203ENST00000612369 HERVK_113P62684 666 aa21.89■■□□□ 1.09
VCX3A-203ENST00000612369 IRF5Q13568 498 aa21.89■■□□□ 1.09
VCX3A-203ENST00000612369 C12orf60Q5U649 245 aa21.89■■□□□ 1.09
VCX3A-203ENST00000612369 APPBP2Q92624 585 aa21.89■■□□□ 1.09
VCX3A-203ENST00000612369 P2RX7Q99572 595 aaKnown RBP21.89■■□□□ 1.09
VCX3A-203ENST00000612369 GABRQQ9UN88 632 aa21.89■■□□□ 1.09
VCX3A-203ENST00000612369 USP17L12C9JPN9 530 aa21.88■■□□□ 1.09
VCX3A-203ENST00000612369 USP17L21D6R901 530 aa21.88■■□□□ 1.09
VCX3A-203ENST00000612369 CYP2D6P10635 497 aa21.88■■□□□ 1.09
VCX3A-203ENST00000612369 GUCY1A2P33402 732 aa21.88■■□□□ 1.09
VCX3A-203ENST00000612369 FLT3LGP49771 235 aa21.88■■□□□ 1.09
VCX3A-203ENST00000612369 TSHZ3Q63HK5 1081 aa21.88■■□□□ 1.09
VCX3A-203ENST00000612369 TMEM179Q6ZVK1 233 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms