RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 CST9Q5W186 159 aa14.26□□□□□ -0.13
CLK4-215ENST00000611733 ZNF444Q8N0Y2 327 aaPredicted RBP14.26□□□□□ -0.13
CLK4-215ENST00000611733 NCOA7Q8NI08 942 aa14.26□□□□□ -0.13
CLK4-215ENST00000611733 ZKSCAN4Q969J2 545 aaPredicted RBP14.26□□□□□ -0.13
CLK4-215ENST00000611733 IL17RAQ96F46 866 aa14.26□□□□□ -0.13
CLK4-215ENST00000611733 RNF41Q9H4P4 317 aaPredicted RBP14.26□□□□□ -0.13
CLK4-215ENST00000611733 GPHNQ9NQX3 736 aaPredicted RBP14.26□□□□□ -0.13
CLK4-215ENST00000611733 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.26□□□□□ -0.13
CLK4-215ENST00000611733 ANAPC15P60006 121 aa14.26□□□□□ -0.13
CLK4-215ENST00000611733 CCDC84Q86UT8 332 aaPredicted RBP14.26□□□□□ -0.13
CLK4-215ENST00000611733 CLEC10AQ8IUN9 316 aa14.26□□□□□ -0.13
CLK4-215ENST00000611733 KLRG1Q96E93 195 aa14.26□□□□□ -0.13
CLK4-215ENST00000611733 TOMM70O94826 608 aa14.25□□□□□ -0.13
CLK4-215ENST00000611733 ZNF341Q9BYN7 854 aa14.25□□□□□ -0.13
CLK4-215ENST00000611733 KRT23Q9C075 422 aa14.25□□□□□ -0.13
CLK4-215ENST00000611733 ZSWIM6Q9HCJ5 1215 aa14.25□□□□□ -0.13
CLK4-215ENST00000611733 IL17RBQ9NRM6 502 aa14.25□□□□□ -0.13
CLK4-215ENST00000611733 ZNF112Q9UJU3 913 aa14.25□□□□□ -0.13
CLK4-215ENST00000611733 ANGEL1Q9UNK9 670 aaKnown RBP14.25□□□□□ -0.13
CLK4-215ENST00000611733 MPHOSPH10O00566 681 aaKnown RBP14.24□□□□□ -0.13
CLK4-215ENST00000611733 CELF2O95319 508 aaKnown RBP14.24□□□□□ -0.13
CLK4-215ENST00000611733 GUCY1A2P33402 732 aa14.24□□□□□ -0.13
CLK4-215ENST00000611733 EXOSC10Q01780 885 aaKnown RBP14.24□□□□□ -0.13
CLK4-215ENST00000611733 TRDNQ13061 729 aa14.24□□□□□ -0.13
CLK4-215ENST00000611733 KRT32Q14532 448 aa14.24□□□□□ -0.13
CLK4-215ENST00000611733 DCAF15Q66K64 600 aa14.24□□□□□ -0.13
CLK4-215ENST00000611733 RALYLQ86SE5 291 aaKnown RBP14.24□□□□□ -0.13
CLK4-215ENST00000611733 ESR2Q92731 530 aa14.24□□□□□ -0.13
CLK4-215ENST00000611733 WRNIP1Q96S55 665 aa14.24□□□□□ -0.13
CLK4-215ENST00000611733 SENP2Q9HC62 589 aa14.24□□□□□ -0.13
CLK4-215ENST00000611733 TSPY2A6NKD2 308 aa14.24□□□□□ -0.13
CLK4-215ENST00000611733 UBE2Q2LH0YL09 131 aa14.24□□□□□ -0.13
CLK4-215ENST00000611733 GH2P01242 217 aa14.24□□□□□ -0.13
CLK4-215ENST00000611733 CAP2P40123 477 aa14.24□□□□□ -0.13
CLK4-215ENST00000611733 TTLL12Q14166 644 aaPredicted RBP14.24□□□□□ -0.13
CLK4-215ENST00000611733 LARP6Q9BRS8 491 aaKnown RBP14.24□□□□□ -0.13
CLK4-215ENST00000611733 CNNM2Q9H8M5 875 aa14.24□□□□□ -0.13
CLK4-215ENST00000611733 PRC1O43663 620 aa14.23□□□□□ -0.13
CLK4-215ENST00000611733 TSPY3P0CV98 308 aa14.23□□□□□ -0.13
CLK4-215ENST00000611733 TSPY8P0CW00 308 aa14.23□□□□□ -0.13
CLK4-215ENST00000611733 PCP11498 1178 aaKnown RBP14.23□□□□□ -0.13
CLK4-215ENST00000611733 RPS6KB1P23443 525 aa14.23□□□□□ -0.13
CLK4-215ENST00000611733 SEPT2Q15019 361 aa14.23□□□□□ -0.13
CLK4-215ENST00000611733 ABCB5Q2M3G0 1257 aa14.23□□□□□ -0.13
CLK4-215ENST00000611733 BLOC1S2Q6QNY1 142 aa14.23□□□□□ -0.13
CLK4-215ENST00000611733 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.23□□□□□ -0.13
CLK4-215ENST00000611733 RUFY3Q7L099 469 aa14.23□□□□□ -0.13
CLK4-215ENST00000611733 DHX32Q7L7V1 743 aaKnown RBP14.23□□□□□ -0.13
CLK4-215ENST00000611733 SMC1BQ8NDV3 1235 aa14.23□□□□□ -0.13
CLK4-215ENST00000611733 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.23□□□□□ -0.13
CLK4-215ENST00000611733 TM6SF1Q9BZW5 370 aa14.23□□□□□ -0.13
CLK4-215ENST00000611733 ZNF287Q9HBT7 754 aa14.23□□□□□ -0.13
CLK4-215ENST00000611733 PASKQ96RG2 1323 aa14.23□□□□□ -0.13
CLK4-215ENST00000611733 PPP1R12BO60237 982 aaPredicted RBP14.23□□□□□ -0.13
CLK4-215ENST00000611733 PSMA5P28066 241 aa14.23□□□□□ -0.13
CLK4-215ENST00000611733 NF2P35240 595 aa14.23□□□□□ -0.13
CLK4-215ENST00000611733 NEDD1Q8NHV4 660 aa14.23□□□□□ -0.13
CLK4-215ENST00000611733 RBM46Q8TBY0 533 aaKnown RBP14.23□□□□□ -0.13
CLK4-215ENST00000611733 HOOK2Q96ED9 719 aa14.23□□□□□ -0.13
CLK4-215ENST00000611733 CLMNQ96JQ2 1002 aa14.23□□□□□ -0.13
CLK4-215ENST00000611733 MCM5P33992 734 aa14.22□□□□□ -0.13
CLK4-215ENST00000611733 NEK4P51957 841 aa14.22□□□□□ -0.13
CLK4-215ENST00000611733 RAB3GAP1Q15042 981 aa14.22□□□□□ -0.13
CLK4-215ENST00000611733 SIAH1Q8IUQ4 282 aa14.22□□□□□ -0.13
CLK4-215ENST00000611733 IGDCC4Q8TDY8 1250 aa14.22□□□□□ -0.13
CLK4-215ENST00000611733 CYP46A1Q9Y6A2 500 aa14.22□□□□□ -0.13
CLK4-215ENST00000611733 IGKV6D-41A0A0C4DH26 115 aa14.22□□□□□ -0.13
CLK4-215ENST00000611733 CTNND1O60716 968 aaKnown RBP14.22□□□□□ -0.13
CLK4-215ENST00000611733 MAP3K9P80192 1104 aa14.22□□□□□ -0.13
CLK4-215ENST00000611733 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
CLK4-215ENST00000611733 CEP95Q96GE4 821 aa14.22□□□□□ -0.13
CLK4-215ENST00000611733 CCDC17Q96LX7 622 aa14.22□□□□□ -0.13
CLK4-215ENST00000611733 GBA2Q9HCG7 927 aaPredicted RBP14.22□□□□□ -0.13
CLK4-215ENST00000611733 TSHZ2Q9NRE2 1034 aa14.22□□□□□ -0.13
CLK4-215ENST00000611733 ZBTB21Q9ULJ3 1066 aa14.22□□□□□ -0.13
CLK4-215ENST00000611733 CD2BP2O95400 341 aaKnown RBP14.21□□□□□ -0.13
CLK4-215ENST00000611733 VGLL4Q14135 290 aa14.21□□□□□ -0.13
CLK4-215ENST00000611733 RCSD1Q6JBY9 416 aa14.21□□□□□ -0.13
CLK4-215ENST00000611733 Q6ZUG5 572 aa14.21□□□□□ -0.13
CLK4-215ENST00000611733 TTC14Q96N46 770 aa14.21□□□□□ -0.13
CLK4-215ENST00000611733 ZSCAN10Q96SZ4 725 aaPredicted RBP14.21□□□□□ -0.13
CLK4-215ENST00000611733 IFIT3O14879 490 aaKnown RBP14.2□□□□□ -0.14
CLK4-215ENST00000611733 SEC23AQ15436 765 aa14.2□□□□□ -0.14
CLK4-215ENST00000611733 MAP3K11Q16584 847 aa14.2□□□□□ -0.14
CLK4-215ENST00000611733 ENAHQ8N8S7 591 aaPredicted RBP14.2□□□□□ -0.14
CLK4-215ENST00000611733 CHMP4CQ96CF2 233 aa14.2□□□□□ -0.14
CLK4-215ENST00000611733 PDRG1Q9NUG6 133 aa14.2□□□□□ -0.14
CLK4-215ENST00000611733 SNCAIPQ9Y6H5 919 aa14.2□□□□□ -0.14
CLK4-215ENST00000611733 TNKSO95271 1327 aa14.2□□□□□ -0.14
CLK4-215ENST00000611733 HMGB1P09429 215 aaKnown RBP14.2□□□□□ -0.14
CLK4-215ENST00000611733 IREB2P48200 963 aaKnown RBP14.2□□□□□ -0.14
CLK4-215ENST00000611733 TOB2Q14106 344 aaPredicted RBP14.2□□□□□ -0.14
CLK4-215ENST00000611733 LDLRAD1Q5T700 205 aa14.2□□□□□ -0.14
CLK4-215ENST00000611733 ARMC9Q7Z3E5 817 aa14.2□□□□□ -0.14
CLK4-215ENST00000611733 SCYL3Q8IZE3 742 aa14.2□□□□□ -0.14
CLK4-215ENST00000611733 CABP5Q9NP86 173 aa14.2□□□□□ -0.14
CLK4-215ENST00000611733 MTMR4Q9NYA4 1195 aa14.2□□□□□ -0.14
CLK4-215ENST00000611733 TAOK2Q9UL54 1235 aa14.2□□□□□ -0.14
CLK4-215ENST00000611733 A0A1W2PRG0 241 aa14.19□□□□□ -0.14
CLK4-215ENST00000611733 EEF2P13639 858 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms