RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 PTCH2Q9Y6C5 1203 aa7.23□□□□□ -1.25
LINC00397-202ENST00000606785 DCDC2CA8MYV0 355 aa7.22□□□□□ -1.25
LINC00397-202ENST00000606785 DNAJA2O60884 412 aa7.22□□□□□ -1.25
LINC00397-202ENST00000606785 LILRB5O75023 590 aa7.22□□□□□ -1.25
LINC00397-202ENST00000606785 EPXP11678 715 aa7.22□□□□□ -1.25
LINC00397-202ENST00000606785 HOXB4P17483 251 aaPredicted RBP7.22□□□□□ -1.25
LINC00397-202ENST00000606785 LIG1P18858 919 aa7.22□□□□□ -1.25
LINC00397-202ENST00000606785 ZYXQ15942 572 aaKnown RBP7.22□□□□□ -1.25
LINC00397-202ENST00000606785 HP1BP3Q5SSJ5 553 aaPredicted RBP7.22□□□□□ -1.25
LINC00397-202ENST00000606785 VHLLQ6RSH7 139 aa7.22□□□□□ -1.25
LINC00397-202ENST00000606785 WFDC8Q8IUA0 241 aa7.22□□□□□ -1.25
LINC00397-202ENST00000606785 SYNPOQ8N3V7 929 aa7.22□□□□□ -1.25
LINC00397-202ENST00000606785 WDR89Q96FK6 387 aaPredicted RBP7.22□□□□□ -1.25
LINC00397-202ENST00000606785 CARD10Q9BWT7 1032 aa7.22□□□□□ -1.25
LINC00397-202ENST00000606785 CNNM2Q9H8M5 875 aa7.22□□□□□ -1.25
LINC00397-202ENST00000606785 ADAM30Q9UKF2 790 aa7.22□□□□□ -1.25
LINC00397-202ENST00000606785 LTBP3Q9NS15 1303 aa7.22□□□□□ -1.25
LINC00397-202ENST00000606785 GNB5O14775 395 aa7.21□□□□□ -1.26
LINC00397-202ENST00000606785 TCEA2Q15560 299 aa7.21□□□□□ -1.26
LINC00397-202ENST00000606785 TKFCQ3LXA3 575 aa7.21□□□□□ -1.26
LINC00397-202ENST00000606785 ZC3H12AQ5D1E8 599 aaKnown RBP7.21□□□□□ -1.26
LINC00397-202ENST00000606785 KLHDC7BQ96G42 594 aa7.21□□□□□ -1.26
LINC00397-202ENST00000606785 SLC9A7Q96T83 725 aa7.21□□□□□ -1.26
LINC00397-202ENST00000606785 SEMA6BQ9H3T3 888 aa7.21□□□□□ -1.26
LINC00397-202ENST00000606785 METTL14Q9HCE5 456 aaKnown RBP7.21□□□□□ -1.26
LINC00397-202ENST00000606785 PRAMEF27A3QJZ7 478 aa7.2□□□□□ -1.26
LINC00397-202ENST00000606785 TM4SF5O14894 197 aa7.2□□□□□ -1.26
LINC00397-202ENST00000606785 PGRP06401 933 aa7.2□□□□□ -1.26
LINC00397-202ENST00000606785 GRK4P32298 578 aa7.2□□□□□ -1.26
LINC00397-202ENST00000606785 MSL1Q68DK7 614 aa7.2□□□□□ -1.26
LINC00397-202ENST00000606785 ZSWIM2Q8NEG5 633 aa7.2□□□□□ -1.26
LINC00397-202ENST00000606785 USP26Q9BXU7 913 aa7.2□□□□□ -1.26
LINC00397-202ENST00000606785 EPN3Q9H201 632 aa7.2□□□□□ -1.26
LINC00397-202ENST00000606785 KLHL3Q9UH77 587 aa7.2□□□□□ -1.26
LINC00397-202ENST00000606785 LOC100289279A0A1B0GTE1 492 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 M0R082 166 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 SUSD5O60279 629 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 SLFN14P0C7P3 912 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 CHRNA4P43681 627 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 MASP1P48740 699 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 NLRP12P59046 1061 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 AMPD3Q01432 767 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 RING1Q06587 406 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 LONRF2Q1L5Z9 754 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 TMEM67Q5HYA8 995 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 C12orf40Q86WS4 652 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 MAP4K3Q8IVH8 894 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 ZNF417Q8TAU3 575 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 ZNF587Q96SQ5 575 aaPredicted RBP7.19□□□□□ -1.26
LINC00397-202ENST00000606785 WDR18Q9BV38 432 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 SPATA9Q9BWV2 254 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 WNT10AQ9GZT5 417 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 NOP53Q9NZM5 478 aaKnown RBP7.19□□□□□ -1.26
LINC00397-202ENST00000606785 PCDHB10Q9UN67 800 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 PCDHGC5Q9Y5F6 944 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 SYNGAP1Q96PV0 1343 aa7.19□□□□□ -1.26
LINC00397-202ENST00000606785 CHURC1-FNTBB4DL54 471 aa7.18□□□□□ -1.26
LINC00397-202ENST00000606785 MARCH6O60337 910 aa7.18□□□□□ -1.26
LINC00397-202ENST00000606785 ASMTLO95671 621 aa7.18□□□□□ -1.26
LINC00397-202ENST00000606785 RAG1P15918 1043 aa7.18□□□□□ -1.26
LINC00397-202ENST00000606785 AMPD1P23109 780 aa7.18□□□□□ -1.26
LINC00397-202ENST00000606785 ETF1P62495 437 aaKnown RBP7.18□□□□□ -1.26
LINC00397-202ENST00000606785 ERVK-24P63145 666 aa7.18□□□□□ -1.26
LINC00397-202ENST00000606785 SLC7A5Q01650 507 aa7.18□□□□□ -1.26
LINC00397-202ENST00000606785 SETDB1Q15047 1291 aa7.18□□□□□ -1.26
LINC00397-202ENST00000606785 SLC10A6Q3KNW5 377 aa7.18□□□□□ -1.26
LINC00397-202ENST00000606785 KIAA1211LQ6NV74 962 aa7.18□□□□□ -1.26
LINC00397-202ENST00000606785 C8orf86Q6ZUL3 223 aa7.18□□□□□ -1.26
LINC00397-202ENST00000606785 RPUSD2Q8IZ73 545 aaKnown RBP7.18□□□□□ -1.26
LINC00397-202ENST00000606785 LRRC47Q8N1G4 583 aaKnown RBP7.18□□□□□ -1.26
LINC00397-202ENST00000606785 GALNT11Q8NCW6 608 aa7.18□□□□□ -1.26
LINC00397-202ENST00000606785 KLHL6Q8WZ60 621 aa7.18□□□□□ -1.26
LINC00397-202ENST00000606785 ACSF2Q96CM8 615 aaPredicted RBP7.18□□□□□ -1.26
LINC00397-202ENST00000606785 ZNF214Q9UL59 606 aaPredicted RBP7.18□□□□□ -1.26
LINC00397-202ENST00000606785 PLAAQ9Y263 795 aa7.18□□□□□ -1.26
LINC00397-202ENST00000606785 HIF3AQ9Y2N7 669 aa7.18□□□□□ -1.26
LINC00397-202ENST00000606785 CSADQ9Y600 493 aa7.18□□□□□ -1.26
LINC00397-202ENST00000606785 IQCA1LA6NCM1 817 aa7.17□□□□□ -1.26
LINC00397-202ENST00000606785 FAM86C2PA6NEL3 165 aa7.17□□□□□ -1.26
LINC00397-202ENST00000606785 AOC2O75106 756 aa7.17□□□□□ -1.26
LINC00397-202ENST00000606785 FAM153BP0C7A2 387 aa7.17□□□□□ -1.26
LINC00397-202ENST00000606785 CCNFP41002 786 aa7.17□□□□□ -1.26
LINC00397-202ENST00000606785 DALRD3Q5D0E6 543 aaKnown RBP7.17□□□□□ -1.26
LINC00397-202ENST00000606785 ZC3H12BQ5HYM0 836 aaKnown RBP7.17□□□□□ -1.26
LINC00397-202ENST00000606785 SLC26A8Q96RN1 970 aa7.17□□□□□ -1.26
LINC00397-202ENST00000606785 PRDM6Q9NQX0 595 aa7.17□□□□□ -1.26
LINC00397-202ENST00000606785 CD2APQ9Y5K6 639 aa7.17□□□□□ -1.26
LINC00397-202ENST00000606785 BTBD11A6QL63 1104 aa7.16□□□□□ -1.26
LINC00397-202ENST00000606785 FANCGO15287 622 aa7.16□□□□□ -1.26
LINC00397-202ENST00000606785 ADCY3O60266 1144 aa7.16□□□□□ -1.26
LINC00397-202ENST00000606785 ADAM11O75078 769 aa7.16□□□□□ -1.26
LINC00397-202ENST00000606785 DLGAP3O95886 979 aa7.16□□□□□ -1.26
LINC00397-202ENST00000606785 VIL1P09327 827 aaKnown RBP7.16□□□□□ -1.26
LINC00397-202ENST00000606785 YARSP54577 528 aaKnown RBP7.16□□□□□ -1.26
LINC00397-202ENST00000606785 BBS9Q3SYG4 887 aa7.16□□□□□ -1.26
LINC00397-202ENST00000606785 GNPTABQ3T906 1256 aa7.16□□□□□ -1.26
LINC00397-202ENST00000606785 CHSY3Q70JA7 882 aa7.16□□□□□ -1.26
LINC00397-202ENST00000606785 ILDR2Q71H61 639 aa7.16□□□□□ -1.26
LINC00397-202ENST00000606785 MCATQ8IVS2 390 aaKnown RBP7.16□□□□□ -1.26
LINC00397-202ENST00000606785 SLFN12Q8IYM2 578 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms