RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 OGFOD3Q6PK18 319 aa5.91□□□□□ -1.46
CKS1BP3-201ENST00000600888 REC114Q7Z4M0 266 aa5.91□□□□□ -1.46
CKS1BP3-201ENST00000600888 KIAA0825Q8IV33 1275 aa5.91□□□□□ -1.46
CKS1BP3-201ENST00000600888 HID1Q8IV36 788 aa5.91□□□□□ -1.46
CKS1BP3-201ENST00000600888 NT5C1AQ9BXI3 368 aa5.91□□□□□ -1.46
CKS1BP3-201ENST00000600888 FBRSQ9HAH7 460 aa5.91□□□□□ -1.46
CKS1BP3-201ENST00000600888 ATG3Q9NT62 314 aa5.91□□□□□ -1.46
CKS1BP3-201ENST00000600888 UBP1Q9NZI7 540 aa5.91□□□□□ -1.46
CKS1BP3-201ENST00000600888 AQRO60306 1485 aaKnown RBP eCLIP5.9□□□□□ -1.46
CKS1BP3-201ENST00000600888 RAD54L2Q9Y4B4 1467 aa5.9□□□□□ -1.46
CKS1BP3-201ENST00000600888 TOP2BQ02880 1626 aa5.9□□□□□ -1.46
CKS1BP3-201ENST00000600888 PRR19A6NJB7 356 aa5.9□□□□□ -1.46
CKS1BP3-201ENST00000600888 PGRP06401 933 aa5.9□□□□□ -1.46
CKS1BP3-201ENST00000600888 CRKP46108 304 aa5.9□□□□□ -1.46
CKS1BP3-201ENST00000600888 PDE4BQ07343 736 aa5.9□□□□□ -1.46
CKS1BP3-201ENST00000600888 SLBPQ14493 270 aaKnown RBP eCLIP5.9□□□□□ -1.46
CKS1BP3-201ENST00000600888 NKG7Q16617 165 aa5.9□□□□□ -1.46
CKS1BP3-201ENST00000600888 CWF19L2Q2TBE0 894 aaKnown RBP5.9□□□□□ -1.46
CKS1BP3-201ENST00000600888 ZNF654Q8IZM8 581 aa5.9□□□□□ -1.46
CKS1BP3-201ENST00000600888 EAF1Q96JC9 268 aaPredicted RBP5.9□□□□□ -1.46
CKS1BP3-201ENST00000600888 OSBPL1AQ9BXW6 950 aa5.9□□□□□ -1.46
CKS1BP3-201ENST00000600888 LRRC3Q9BY71 257 aa5.9□□□□□ -1.46
CKS1BP3-201ENST00000600888 RNF112Q9ULX5 631 aa5.9□□□□□ -1.46
CKS1BP3-201ENST00000600888 POLR3KQ9Y2Y1 108 aaPredicted RBP5.9□□□□□ -1.46
CKS1BP3-201ENST00000600888 CORINQ9Y5Q5 1042 aa5.9□□□□□ -1.46
CKS1BP3-201ENST00000600888 PBRM1Q86U86 1689 aa5.9□□□□□ -1.47
CKS1BP3-201ENST00000600888 ABCA10Q8WWZ4 1543 aa5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 ABCA5Q8WWZ7 1642 aa5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 LRIG2O94898 1065 aa5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 FAM87AP0C7U9 286 aa5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 PLCG1P19174 1290 aa5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 CAP2P40123 477 aa5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 CYP27A1Q02318 531 aa5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 APOBRQ0VD83 1088 aa5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 DUSP27Q5VZP5 1158 aa5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 ZNF765Q7L2R6 523 aa5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 ARMCX6Q7L4S7 300 aa5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 METTL22Q9BUU2 404 aaPredicted RBP5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 DUSP23Q9BVJ7 150 aa5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 FOXQ1Q9C009 403 aa5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 BRMS1Q9HCU9 246 aa5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 TJP2Q9UDY2 1190 aa5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 ADAM30Q9UKF2 790 aa5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 PRR36Q9H6K5 1346 aa5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 MAGI1Q96QZ7 1491 aaPredicted RBP5.89□□□□□ -1.47
CKS1BP3-201ENST00000600888 GRIN3BO60391 1043 aa5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 LEFTY1O75610 366 aa5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 TGFB1P01137 390 aa5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 TCF3P15923 654 aa5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 CPSF6Q16630 551 aaKnown RBP eCLIP5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 CYP27C1Q4G0S4 372 aa5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 SEZ6Q53EL9 994 aa5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 TMEM201Q5SNT2 666 aa5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 SLC6A19Q695T7 634 aa5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 MCATQ8IVS2 390 aaKnown RBP5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 SLITRK4Q8IW52 837 aa5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 MRPL41Q8IXM3 137 aaKnown RBP5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 NKD1Q969G9 470 aa5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 ACSF2Q96CM8 615 aaPredicted RBP5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 TMEM87BQ96K49 555 aa5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 PRDM10Q9NQV6 1147 aa5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 LEMD3Q9Y2U8 911 aa5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 GRIN2BQ13224 1484 aa5.88□□□□□ -1.47
CKS1BP3-201ENST00000600888 HTR3BO95264 441 aa5.87□□□□□ -1.47
CKS1BP3-201ENST00000600888 CST3P01034 146 aaPredicted RBP5.87□□□□□ -1.47
CKS1BP3-201ENST00000600888 RAD51AP2Q09MP3 1159 aa5.87□□□□□ -1.47
CKS1BP3-201ENST00000600888 ZMYM1Q5SVZ6 1142 aa5.87□□□□□ -1.47
CKS1BP3-201ENST00000600888 PRAMEF13Q5VWM6 474 aa5.87□□□□□ -1.47
CKS1BP3-201ENST00000600888 TOP6BLQ8N6T0 577 aa5.87□□□□□ -1.47
CKS1BP3-201ENST00000600888 MFSD2AQ8NA29 543 aa5.87□□□□□ -1.47
CKS1BP3-201ENST00000600888 TGIF2Q9GZN2 237 aa5.87□□□□□ -1.47
CKS1BP3-201ENST00000600888 PIM2Q9P1W9 311 aa5.87□□□□□ -1.47
CKS1BP3-201ENST00000600888 REV1Q9UBZ9 1251 aa5.87□□□□□ -1.47
CKS1BP3-201ENST00000600888 PCDHB14Q9Y5E9 798 aa5.87□□□□□ -1.47
CKS1BP3-201ENST00000600888 TDRD9Q8NDG6 1382 aaKnown RBP5.87□□□□□ -1.47
CKS1BP3-201ENST00000600888 WRNQ14191 1432 aaPredicted RBP eCLIP5.87□□□□□ -1.47
CKS1BP3-201ENST00000600888 SYNJ1O43426 1573 aa5.87□□□□□ -1.47
CKS1BP3-201ENST00000600888 RIMBP3CA6NJZ7 1639 aa5.87□□□□□ -1.47
CKS1BP3-201ENST00000600888 RIMBP3BA6NNM3 1639 aa5.87□□□□□ -1.47
CKS1BP3-201ENST00000600888 RIMBP3Q9UFD9 1639 aa5.87□□□□□ -1.47
CKS1BP3-201ENST00000600888 GAPVD1Q14C86 1478 aa5.86□□□□□ -1.47
CKS1BP3-201ENST00000600888 UPK3BL1B0FP48 263 aa5.86□□□□□ -1.47
CKS1BP3-201ENST00000600888 UPK3BL2E5RIL1 263 aa5.86□□□□□ -1.47
CKS1BP3-201ENST00000600888 SLITRK5O94991 958 aa5.86□□□□□ -1.47
CKS1BP3-201ENST00000600888 ATE1O95260 518 aa5.86□□□□□ -1.47
CKS1BP3-201ENST00000600888 MCM4P33991 863 aa5.86□□□□□ -1.47
CKS1BP3-201ENST00000600888 PAK2Q13177 524 aa5.86□□□□□ -1.47
CKS1BP3-201ENST00000600888 FAM214BQ7L5A3 538 aa5.86□□□□□ -1.47
CKS1BP3-201ENST00000600888 REXO1Q8N1G1 1221 aaKnown RBP5.86□□□□□ -1.47
CKS1BP3-201ENST00000600888 EHMT1Q9H9B1 1298 aa5.86□□□□□ -1.47
CKS1BP3-201ENST00000600888 IGSF5Q9NSI5 407 aa5.86□□□□□ -1.47
CKS1BP3-201ENST00000600888 ARHGEF11O15085 1522 aa5.85□□□□□ -1.47
CKS1BP3-201ENST00000600888 SNAPC4Q5SXM2 1469 aa5.85□□□□□ -1.47
CKS1BP3-201ENST00000600888 CHURC1-FNTBB4DL54 471 aa5.85□□□□□ -1.47
CKS1BP3-201ENST00000600888 CYP26A1O43174 497 aa5.85□□□□□ -1.47
CKS1BP3-201ENST00000600888 COBLO75128 1261 aa5.85□□□□□ -1.47
CKS1BP3-201ENST00000600888 EOMESO95936 686 aa5.85□□□□□ -1.47
CKS1BP3-201ENST00000600888 FOSL1P15407 271 aa5.85□□□□□ -1.47
CKS1BP3-201ENST00000600888 ERCC5P28715 1186 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms