RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 MKNK2Q9HBH9 465 aa23.74■■□□□ 1.39
SHKBP1-222ENST00000600320 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.74■■□□□ 1.39
SHKBP1-222ENST00000600320 SNCAIPQ9Y6H5 919 aa23.74■■□□□ 1.39
SHKBP1-222ENST00000600320 MYH8P13535 1937 aa23.73■■□□□ 1.39
SHKBP1-222ENST00000600320 ORC4O43929 436 aa23.73■■□□□ 1.39
SHKBP1-222ENST00000600320 NOL9Q5SY16 702 aaKnown RBP23.73■■□□□ 1.39
SHKBP1-222ENST00000600320 MFSD6Q6ZSS7 791 aa23.73■■□□□ 1.39
SHKBP1-222ENST00000600320 ANKRD13AQ8IZ07 590 aa23.73■■□□□ 1.39
SHKBP1-222ENST00000600320 BACH2Q9BYV9 841 aa23.73■■□□□ 1.39
SHKBP1-222ENST00000600320 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.73■■□□□ 1.39
SHKBP1-222ENST00000600320 TLL2Q9Y6L7 1015 aa23.73■■□□□ 1.39
SHKBP1-222ENST00000600320 E7EWF7 191 aa23.72■■□□□ 1.39
SHKBP1-222ENST00000600320 CTNND1O60716 968 aaKnown RBP23.72■■□□□ 1.39
SHKBP1-222ENST00000600320 HUNKP57058 714 aa23.72■■□□□ 1.39
SHKBP1-222ENST00000600320 RRP12Q5JTH9 1297 aaKnown RBP23.72■■□□□ 1.39
SHKBP1-222ENST00000600320 SAPCD2Q86UD0 394 aa23.72■■□□□ 1.39
SHKBP1-222ENST00000600320 SCYL3Q8IZE3 742 aa23.72■■□□□ 1.39
SHKBP1-222ENST00000600320 DOCK1Q14185 1865 aa23.72■■□□□ 1.39
SHKBP1-222ENST00000600320 GH2P01242 217 aa23.71■■□□□ 1.39
SHKBP1-222ENST00000600320 GUCY1A2P33402 732 aa23.71■■□□□ 1.39
SHKBP1-222ENST00000600320 FAM47AQ5JRC9 791 aa23.71■■□□□ 1.39
SHKBP1-222ENST00000600320 CCDC84Q86UT8 332 aaPredicted RBP23.71■■□□□ 1.39
SHKBP1-222ENST00000600320 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.71■■□□□ 1.39
SHKBP1-222ENST00000600320 RNF41Q9H4P4 317 aaPredicted RBP23.71■■□□□ 1.39
SHKBP1-222ENST00000600320 TOMM22Q9NS69 142 aa23.71■■□□□ 1.39
SHKBP1-222ENST00000600320 ZBTB21Q9ULJ3 1066 aa23.71■■□□□ 1.39
SHKBP1-222ENST00000600320 ABT1Q9ULW3 272 aaKnown RBP23.71■■□□□ 1.39
SHKBP1-222ENST00000600320 ATAD5Q96QE3 1844 aa23.7■■□□□ 1.39
SHKBP1-222ENST00000600320 B4E1Z4 1266 aa23.7■■□□□ 1.38
SHKBP1-222ENST00000600320 EIF5BO60841 1220 aaKnown RBP23.7■■□□□ 1.38
SHKBP1-222ENST00000600320 PCP11498 1178 aaKnown RBP23.7■■□□□ 1.38
SHKBP1-222ENST00000600320 COL9A3Q14050 684 aaPredicted RBP23.7■■□□□ 1.38
SHKBP1-222ENST00000600320 ABCB5Q2M3G0 1257 aa23.7■■□□□ 1.38
SHKBP1-222ENST00000600320 RNF20Q5VTR2 975 aa23.7■■□□□ 1.38
SHKBP1-222ENST00000600320 ZNF444Q8N0Y2 327 aaPredicted RBP23.7■■□□□ 1.38
SHKBP1-222ENST00000600320 CNKSR2Q8WXI2 1034 aa23.7■■□□□ 1.38
SHKBP1-222ENST00000600320 CCDC17Q96LX7 622 aa23.7■■□□□ 1.38
SHKBP1-222ENST00000600320 ELP3Q9H9T3 547 aa23.7■■□□□ 1.38
SHKBP1-222ENST00000600320 ZNF287Q9HBT7 754 aa23.7■■□□□ 1.38
SHKBP1-222ENST00000600320 SNX14Q9Y5W7 946 aa23.7■■□□□ 1.38
SHKBP1-222ENST00000600320 CSADQ9Y600 493 aa23.7■■□□□ 1.38
SHKBP1-222ENST00000600320 MPHOSPH10O00566 681 aaKnown RBP23.69■■□□□ 1.38
SHKBP1-222ENST00000600320 TFAP4Q01664 338 aa23.69■■□□□ 1.38
SHKBP1-222ENST00000600320 TSGA10IPQ3SY00 556 aa23.69■■□□□ 1.38
SHKBP1-222ENST00000600320 CREBZFQ9NS37 354 aa23.69■■□□□ 1.38
SHKBP1-222ENST00000600320 GREB1LQ9C091 1923 aaPredicted RBP23.69■■□□□ 1.38
SHKBP1-222ENST00000600320 RANBP6O60518 1105 aaKnown RBP23.68■■□□□ 1.38
SHKBP1-222ENST00000600320 HTRA3P83110 453 aa23.68■■□□□ 1.38
SHKBP1-222ENST00000600320 SEPT2Q15019 361 aa23.68■■□□□ 1.38
SHKBP1-222ENST00000600320 ADCK5Q3MIX3 580 aa23.68■■□□□ 1.38
SHKBP1-222ENST00000600320 CLEC10AQ8IUN9 316 aa23.68■■□□□ 1.38
SHKBP1-222ENST00000600320 UNCXA6NJT0 531 aa23.67■■□□□ 1.38
SHKBP1-222ENST00000600320 PTPRAP18433 802 aa23.67■■□□□ 1.38
SHKBP1-222ENST00000600320 MCCP23508 829 aa23.67■■□□□ 1.38
SHKBP1-222ENST00000600320 NEDD1Q8NHV4 660 aa23.67■■□□□ 1.38
SHKBP1-222ENST00000600320 CABP5Q9NP86 173 aa23.67■■□□□ 1.38
SHKBP1-222ENST00000600320 PICK1Q9NRD5 415 aa23.67■■□□□ 1.38
SHKBP1-222ENST00000600320 PLIN4Q96Q06 1357 aa23.66■■□□□ 1.38
SHKBP1-222ENST00000600320 IGKV6D-41A0A0C4DH26 115 aa23.66■■□□□ 1.38
SHKBP1-222ENST00000600320 TSPY2A6NKD2 308 aa23.66■■□□□ 1.38
SHKBP1-222ENST00000600320 KDM4AO75164 1064 aa23.66■■□□□ 1.38
SHKBP1-222ENST00000600320 ASNSP08243 561 aa23.66■■□□□ 1.38
SHKBP1-222ENST00000600320 ZKSCAN1P17029 563 aaPredicted RBP23.66■■□□□ 1.38
SHKBP1-222ENST00000600320 GJA5P36382 358 aa23.66■■□□□ 1.38
SHKBP1-222ENST00000600320 RGMBQ6NW40 437 aa23.66■■□□□ 1.38
SHKBP1-222ENST00000600320 TMEM179Q6ZVK1 233 aa23.66■■□□□ 1.38
SHKBP1-222ENST00000600320 CYB5R4Q7L1T6 521 aa23.66■■□□□ 1.38
SHKBP1-222ENST00000600320 ESR2Q92731 530 aa23.66■■□□□ 1.38
SHKBP1-222ENST00000600320 SLC10A4Q96EP9 437 aa23.66■■□□□ 1.38
SHKBP1-222ENST00000600320 KRT23Q9C075 422 aa23.66■■□□□ 1.38
SHKBP1-222ENST00000600320 CNNM2Q9H8M5 875 aa23.66■■□□□ 1.38
SHKBP1-222ENST00000600320 SPDYE5A6NIY4 337 aa23.65■■□□□ 1.38
SHKBP1-222ENST00000600320 TSPY3P0CV98 308 aa23.65■■□□□ 1.38
SHKBP1-222ENST00000600320 TSPY8P0CW00 308 aa23.65■■□□□ 1.38
SHKBP1-222ENST00000600320 RAB3GAP1Q15042 981 aa23.65■■□□□ 1.38
SHKBP1-222ENST00000600320 MB21D2Q8IYB1 491 aaPredicted RBP23.65■■□□□ 1.38
SHKBP1-222ENST00000600320 NCOA7Q8NI08 942 aa23.65■■□□□ 1.38
SHKBP1-222ENST00000600320 GINM1Q9NU53 330 aa23.65■■□□□ 1.38
SHKBP1-222ENST00000600320 ZSWIM5Q9P217 1185 aa23.65■■□□□ 1.38
SHKBP1-222ENST00000600320 PHIPQ8WWQ0 1821 aa23.64■■□□□ 1.38
SHKBP1-222ENST00000600320 NMT2O60551 498 aa23.64■■□□□ 1.37
SHKBP1-222ENST00000600320 TRDNQ13061 729 aa23.64■■□□□ 1.37
SHKBP1-222ENST00000600320 ERO1BQ86YB8 467 aa23.64■■□□□ 1.37
SHKBP1-222ENST00000600320 RASAL3Q86YV0 1011 aa23.64■■□□□ 1.37
SHKBP1-222ENST00000600320 OPTNQ96CV9 577 aa23.64■■□□□ 1.37
SHKBP1-222ENST00000600320 IL17RBQ9NRM6 502 aa23.64■■□□□ 1.37
SHKBP1-222ENST00000600320 USP17L5A8MUK1 530 aa23.63■■□□□ 1.37
SHKBP1-222ENST00000600320 ZNF157P51786 506 aaPredicted RBP23.63■■□□□ 1.37
SHKBP1-222ENST00000600320 ANTXR2P58335 489 aa23.63■■□□□ 1.37
SHKBP1-222ENST00000600320 RALYLQ86SE5 291 aaKnown RBP23.63■■□□□ 1.37
SHKBP1-222ENST00000600320 SIAH1Q8IUQ4 282 aa23.63■■□□□ 1.37
SHKBP1-222ENST00000600320 OTUD5Q96G74 571 aa23.63■■□□□ 1.37
SHKBP1-222ENST00000600320 CEP95Q96GE4 821 aa23.63■■□□□ 1.37
SHKBP1-222ENST00000600320 WNK4Q96J92 1243 aa23.63■■□□□ 1.37
SHKBP1-222ENST00000600320 NEK1Q96PY6 1258 aa23.63■■□□□ 1.37
SHKBP1-222ENST00000600320 ZKSCAN3Q9BRR0 538 aa23.63■■□□□ 1.37
SHKBP1-222ENST00000600320 ZHX2Q9Y6X8 837 aa23.63■■□□□ 1.37
SHKBP1-222ENST00000600320 RASSF10A6NK89 507 aa23.62■■□□□ 1.37
SHKBP1-222ENST00000600320 KRT32Q14532 448 aa23.62■■□□□ 1.37
SHKBP1-222ENST00000600320 CHST3Q7LGC8 479 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms