RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 UPF3BQ9BZI7 483 aaKnown RBP22.76■■□□□ 1.23
LTBP4-223ENST00000598717 MPHOSPH10O00566 681 aaKnown RBP22.75■■□□□ 1.23
LTBP4-223ENST00000598717 KIF3CO14782 793 aa22.75■■□□□ 1.23
LTBP4-223ENST00000598717 PPP1R12BO60237 982 aaPredicted RBP22.75■■□□□ 1.23
LTBP4-223ENST00000598717 RPS6KB1P23443 525 aa22.75■■□□□ 1.23
LTBP4-223ENST00000598717 ZSWIM5Q9P217 1185 aa22.75■■□□□ 1.23
LTBP4-223ENST00000598717 SIPA1L1O43166 1804 aa22.75■■□□□ 1.23
LTBP4-223ENST00000598717 PRC1O43663 620 aa22.74■■□□□ 1.23
LTBP4-223ENST00000598717 CPA1P15085 419 aa22.74■■□□□ 1.23
LTBP4-223ENST00000598717 NEK4P51957 841 aa22.74■■□□□ 1.23
LTBP4-223ENST00000598717 PRKG1Q13976 671 aa22.74■■□□□ 1.23
LTBP4-223ENST00000598717 IQCA1Q86XH1 822 aa22.74■■□□□ 1.23
LTBP4-223ENST00000598717 CABP5Q9NP86 173 aa22.74■■□□□ 1.23
LTBP4-223ENST00000598717 TRAF5O00463 557 aa22.73■■□□□ 1.23
LTBP4-223ENST00000598717 AKR1B1P15121 316 aa22.73■■□□□ 1.23
LTBP4-223ENST00000598717 FGD1P98174 961 aa22.73■■□□□ 1.23
LTBP4-223ENST00000598717 SART3Q15020 963 aaKnown RBP22.73■■□□□ 1.23
LTBP4-223ENST00000598717 ABCB5Q2M3G0 1257 aa22.73■■□□□ 1.23
LTBP4-223ENST00000598717 CYB5R4Q7L1T6 521 aa22.73■■□□□ 1.23
LTBP4-223ENST00000598717 CHST3Q7LGC8 479 aa22.73■■□□□ 1.23
LTBP4-223ENST00000598717 IL27Q8NEV9 243 aa22.73■■□□□ 1.23
LTBP4-223ENST00000598717 UBAC1Q9BSL1 405 aa22.73■■□□□ 1.23
LTBP4-223ENST00000598717 PDRG1Q9NUG6 133 aa22.73■■□□□ 1.23
LTBP4-223ENST00000598717 ERICH2A1L162 156 aa22.72■■□□□ 1.23
LTBP4-223ENST00000598717 GDF11O95390 407 aa22.72■■□□□ 1.23
LTBP4-223ENST00000598717 EXOSC10Q01780 885 aaKnown RBP22.72■■□□□ 1.23
LTBP4-223ENST00000598717 TTLL12Q14166 644 aaPredicted RBP22.72■■□□□ 1.23
LTBP4-223ENST00000598717 CCDC178Q5BJE1 867 aa22.72■■□□□ 1.23
LTBP4-223ENST00000598717 ZNF784Q8NCA9 323 aaPredicted RBP22.72■■□□□ 1.23
LTBP4-223ENST00000598717 NEDD1Q8NHV4 660 aa22.72■■□□□ 1.23
LTBP4-223ENST00000598717 ZNF408Q9H9D4 720 aa22.72■■□□□ 1.23
LTBP4-223ENST00000598717 WDR19Q8NEZ3 1342 aa22.72■■□□□ 1.23
LTBP4-223ENST00000598717 IFIT3O14879 490 aaKnown RBP22.71■■□□□ 1.23
LTBP4-223ENST00000598717 IREB2P48200 963 aaKnown RBP22.71■■□□□ 1.23
LTBP4-223ENST00000598717 ANTXR2P58335 489 aa22.71■■□□□ 1.23
LTBP4-223ENST00000598717 SMC1BQ8NDV3 1235 aa22.71■■□□□ 1.23
LTBP4-223ENST00000598717 NKX2-3Q8TAU0 364 aa22.71■■□□□ 1.23
LTBP4-223ENST00000598717 TCEANC2Q96MN5 208 aa22.71■■□□□ 1.23
LTBP4-223ENST00000598717 WRNIP1Q96S55 665 aa22.71■■□□□ 1.23
LTBP4-223ENST00000598717 ZKSCAN3Q9BRR0 538 aa22.71■■□□□ 1.23
LTBP4-223ENST00000598717 SSC5DA1L4H1 1573 aa22.71■■□□□ 1.23
LTBP4-223ENST00000598717 PHF20L1A8MW92 1017 aa22.7■■□□□ 1.22
LTBP4-223ENST00000598717 ST18O60284 1047 aa22.7■■□□□ 1.22
LTBP4-223ENST00000598717 CTNND1O60716 968 aaKnown RBP22.7■■□□□ 1.22
LTBP4-223ENST00000598717 USP2O75604 605 aaPredicted RBP22.7■■□□□ 1.22
LTBP4-223ENST00000598717 CAP2P40123 477 aa22.7■■□□□ 1.22
LTBP4-223ENST00000598717 COL9A3Q14050 684 aaPredicted RBP22.7■■□□□ 1.22
LTBP4-223ENST00000598717 TMEM179Q6ZVK1 233 aa22.7■■□□□ 1.22
LTBP4-223ENST00000598717 ARMC9Q7Z3E5 817 aa22.7■■□□□ 1.22
LTBP4-223ENST00000598717 KLRG1Q96E93 195 aa22.7■■□□□ 1.22
LTBP4-223ENST00000598717 TMEM87BQ96K49 555 aa22.7■■□□□ 1.22
LTBP4-223ENST00000598717 ZSCAN10Q96SZ4 725 aaPredicted RBP22.7■■□□□ 1.22
LTBP4-223ENST00000598717 MTA3Q9BTC8 594 aa22.7■■□□□ 1.22
LTBP4-223ENST00000598717 LRRC2Q9BYS8 371 aa22.7■■□□□ 1.22
LTBP4-223ENST00000598717 TSHZ2Q9NRE2 1034 aa22.7■■□□□ 1.22
LTBP4-223ENST00000598717 TCP11L1Q9NUJ3 509 aa22.7■■□□□ 1.22
LTBP4-223ENST00000598717 ZNF112Q9UJU3 913 aa22.7■■□□□ 1.22
LTBP4-223ENST00000598717 ANGEL1Q9UNK9 670 aaKnown RBP22.7■■□□□ 1.22
LTBP4-223ENST00000598717 FZD1Q9UP38 647 aa22.7■■□□□ 1.22
LTBP4-223ENST00000598717 TOMM70O94826 608 aa22.69■■□□□ 1.22
LTBP4-223ENST00000598717 ITGBL1O95965 494 aaPredicted RBP22.69■■□□□ 1.22
LTBP4-223ENST00000598717 GH2P01242 217 aa22.69■■□□□ 1.22
LTBP4-223ENST00000598717 RRP1BQ14684 758 aaKnown RBP22.69■■□□□ 1.22
LTBP4-223ENST00000598717 TMEM67Q5HYA8 995 aa22.69■■□□□ 1.22
LTBP4-223ENST00000598717 PPP4R3BQ5MIZ7 849 aa22.69■■□□□ 1.22
LTBP4-223ENST00000598717 Q6ZUG5 572 aa22.69■■□□□ 1.22
LTBP4-223ENST00000598717 GINM1Q9NU53 330 aa22.69■■□□□ 1.22
LTBP4-223ENST00000598717 TNKSO95271 1327 aa22.68■■□□□ 1.22
LTBP4-223ENST00000598717 MAP3K9P80192 1104 aa22.68■■□□□ 1.22
LTBP4-223ENST00000598717 FMR1Q06787 632 aaKnown RBP eCLIP22.68■■□□□ 1.226e-7■■■■□ 22.2
LTBP4-223ENST00000598717 RAB3GAP1Q15042 981 aa22.68■■□□□ 1.22
LTBP4-223ENST00000598717 RBM46Q8TBY0 533 aaKnown RBP22.68■■□□□ 1.22
LTBP4-223ENST00000598717 MYH8P13535 1937 aa22.67■■□□□ 1.22
LTBP4-223ENST00000598717 PLIN4Q96Q06 1357 aa22.67■■□□□ 1.22
LTBP4-223ENST00000598717 NMT2O60551 498 aa22.67■■□□□ 1.22
LTBP4-223ENST00000598717 CELF2O95319 508 aaKnown RBP22.67■■□□□ 1.22
LTBP4-223ENST00000598717 ASNSP08243 561 aa22.67■■□□□ 1.22
LTBP4-223ENST00000598717 INPP5BP32019 993 aa22.67■■□□□ 1.22
LTBP4-223ENST00000598717 WTAPQ15007 396 aa22.67■■□□□ 1.22
LTBP4-223ENST00000598717 ANKRD1Q15327 319 aa22.67■■□□□ 1.22
LTBP4-223ENST00000598717 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.67■■□□□ 1.22
LTBP4-223ENST00000598717 TTC14Q96N46 770 aa22.67■■□□□ 1.22
LTBP4-223ENST00000598717 ALDH8A1Q9H2A2 487 aaPredicted RBP22.67■■□□□ 1.22
LTBP4-223ENST00000598717 KANSL2Q9H9L4 492 aa22.67■■□□□ 1.22
LTBP4-223ENST00000598717 IL17RBQ9NRM6 502 aa22.67■■□□□ 1.22
LTBP4-223ENST00000598717 ZBTB21Q9ULJ3 1066 aa22.67■■□□□ 1.22
LTBP4-223ENST00000598717 SH2B2O14492 632 aaPredicted RBP22.66■■□□□ 1.22
LTBP4-223ENST00000598717 FKBP1BP68106 108 aa22.66■■□□□ 1.22
LTBP4-223ENST00000598717 SEPT2Q15019 361 aa22.66■■□□□ 1.22
LTBP4-223ENST00000598717 DGKHQ86XP1 1220 aa22.66■■□□□ 1.22
LTBP4-223ENST00000598717 SCYL3Q8IZE3 742 aa22.66■■□□□ 1.22
LTBP4-223ENST00000598717 TMTC2Q8N394 836 aa22.66■■□□□ 1.22
LTBP4-223ENST00000598717 C2orf69Q8N8R5 385 aa22.66■■□□□ 1.22
LTBP4-223ENST00000598717 IGDCC4Q8TDY8 1250 aa22.66■■□□□ 1.22
LTBP4-223ENST00000598717 ZKSCAN4Q969J2 545 aaPredicted RBP22.66■■□□□ 1.22
LTBP4-223ENST00000598717 CEP95Q96GE4 821 aa22.66■■□□□ 1.22
LTBP4-223ENST00000598717 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.66■■□□□ 1.22
LTBP4-223ENST00000598717 PICK1Q9NRD5 415 aa22.66■■□□□ 1.22
LTBP4-223ENST00000598717 STX8Q9UNK0 236 aa22.66■■□□□ 1.22
LTBP4-223ENST00000598717 CSADQ9Y600 493 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms