RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	METAP2	P50579	478 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
FARP1-222	ENST00000597777	GOLGA8F	Q08AF8	430 aa		11.3	□□□□□ -0.6
FARP1-222	ENST00000597777	GOLGA8DP	Q0D2H9	430 aa		11.3	□□□□□ -0.6
FARP1-222	ENST00000597777	OLFM4	Q6UX06	510 aa		11.3	□□□□□ -0.6
FARP1-222	ENST00000597777	SLC51A	Q86UW1	340 aa		11.3	□□□□□ -0.6
FARP1-222	ENST00000597777	CEP57L1	Q8IYX8	460 aa		11.3	□□□□□ -0.6
FARP1-222	ENST00000597777	CCDC112	Q8NEF3	446 aa		11.3	□□□□□ -0.6
FARP1-222	ENST00000597777	MNS1	Q8NEH6	495 aa		11.3	□□□□□ -0.6
FARP1-222	ENST00000597777	ZKSCAN5	Q9Y2L8	839 aa		11.3	□□□□□ -0.6
FARP1-222	ENST00000597777	SUGT1	Q9Y2Z0	365 aa		11.3	□□□□□ -0.6
FARP1-222	ENST00000597777	RTKN2	Q8IZC4	609 aa		11.29	□□□□□ -0.6
FARP1-222	ENST00000597777	PLCD3	Q8N3E9	789 aa		11.29	□□□□□ -0.6
FARP1-222	ENST00000597777	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.29	□□□□□ -0.6
FARP1-222	ENST00000597777	KCNJ14	Q9UNX9	436 aa		11.29	□□□□□ -0.6
FARP1-222	ENST00000597777	PSME4	Q14997	1843 aa		11.29	□□□□□ -0.6
FARP1-222	ENST00000597777	CYP21A2	P08686	494 aa		11.29	□□□□□ -0.6
FARP1-222	ENST00000597777	NAP1L1	P55209	391 aa	Known RBP	11.29	□□□□□ -0.6
FARP1-222	ENST00000597777	ALX1	Q15699	326 aa		11.29	□□□□□ -0.6
FARP1-222	ENST00000597777	CERS3	Q8IU89	383 aa		11.29	□□□□□ -0.6
FARP1-222	ENST00000597777	TRIM22	Q8IYM9	498 aa		11.29	□□□□□ -0.6
FARP1-222	ENST00000597777	ALG1	Q9BT22	464 aa		11.29	□□□□□ -0.6
FARP1-222	ENST00000597777	RBM5	P52756	815 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
FARP1-222	ENST00000597777	PSMD1	Q99460	953 aa		11.29	□□□□□ -0.6
FARP1-222	ENST00000597777	MTMR6	Q9Y217	621 aa		11.29	□□□□□ -0.6
FARP1-222	ENST00000597777	TIAM2	Q8IVF5	1701 aa		11.29	□□□□□ -0.6
FARP1-222	ENST00000597777	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.28	□□□□□ -0.6
FARP1-222	ENST00000597777	DPEP1	P16444	411 aa		11.28	□□□□□ -0.6
FARP1-222	ENST00000597777	GSTO1	P78417	241 aa		11.28	□□□□□ -0.6
FARP1-222	ENST00000597777	CCDC93	Q567U6	631 aa		11.28	□□□□□ -0.6
FARP1-222	ENST00000597777	NSUN4	Q96CB9	384 aa	Known RBP	11.28	□□□□□ -0.6
FARP1-222	ENST00000597777	MBD4	O95243	580 aa		11.28	□□□□□ -0.6
FARP1-222	ENST00000597777	CYP7A1	P22680	504 aa		11.28	□□□□□ -0.6
FARP1-222	ENST00000597777	RPS6KB1	P23443	525 aa		11.28	□□□□□ -0.6
FARP1-222	ENST00000597777	IARS	P41252	1262 aa	Known RBP	11.28	□□□□□ -0.6
FARP1-222	ENST00000597777	FKBP1A	P62942	108 aa	Known RBP	11.28	□□□□□ -0.6
FARP1-222	ENST00000597777	STRBP	Q96SI9	672 aa	Known RBP	11.28	□□□□□ -0.6
FARP1-222	ENST00000597777	SLC4A4	Q9Y6R1	1079 aa		11.28	□□□□□ -0.6
FARP1-222	ENST00000597777	SLC3A2	P08195	630 aa	Known RBP	11.28	□□□□□ -0.6
FARP1-222	ENST00000597777	NAA16	Q6N069	864 aa	Predicted RBP	11.28	□□□□□ -0.6
FARP1-222	ENST00000597777	PODN	Q7Z5L7	613 aa		11.28	□□□□□ -0.6
FARP1-222	ENST00000597777	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.28	□□□□□ -0.6
FARP1-222	ENST00000597777	PTGER2	P43116	358 aa		11.27	□□□□□ -0.6
FARP1-222	ENST00000597777	ARID5B	Q14865	1188 aa		11.27	□□□□□ -0.6
FARP1-222	ENST00000597777	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.27	□□□□□ -0.6
FARP1-222	ENST00000597777	SDR42E1	Q8WUS8	393 aa		11.27	□□□□□ -0.6
FARP1-222	ENST00000597777	NACAP1	Q9BZK3	213 aa		11.27	□□□□□ -0.6
FARP1-222	ENST00000597777	PIM2	Q9P1W9	311 aa		11.27	□□□□□ -0.6
FARP1-222	ENST00000597777	CGN	Q9P2M7	1197 aa	Known RBP	11.27	□□□□□ -0.6
FARP1-222	ENST00000597777	ARFGEF1	Q9Y6D6	1849 aa		11.27	□□□□□ -0.61
FARP1-222	ENST00000597777	FOXP2	O15409	715 aa		11.27	□□□□□ -0.61
FARP1-222	ENST00000597777	URI1	O94763	535 aa	Predicted RBP	11.27	□□□□□ -0.61
FARP1-222	ENST00000597777	LDHB	P07195	334 aa	Known RBP	11.27	□□□□□ -0.61
FARP1-222	ENST00000597777	EIF6	P56537	245 aa	Known RBP	11.27	□□□□□ -0.61
FARP1-222	ENST00000597777	MECOM	Q03112	1051 aa		11.27	□□□□□ -0.61
FARP1-222	ENST00000597777	FKBP15	Q5T1M5	1219 aa		11.27	□□□□□ -0.61
FARP1-222	ENST00000597777	CNNM3	Q8NE01	707 aa		11.27	□□□□□ -0.61
FARP1-222	ENST00000597777	GPR101	Q96P66	508 aa	Predicted RBP	11.27	□□□□□ -0.61
FARP1-222	ENST00000597777	USP28	Q96RU2	1077 aa		11.27	□□□□□ -0.61
FARP1-222	ENST00000597777	HINFP	Q9BQA5	517 aa		11.27	□□□□□ -0.61
FARP1-222	ENST00000597777	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.27	□□□□□ -0.61
FARP1-222	ENST00000597777	ZSWIM6	Q9HCJ5	1215 aa		11.27	□□□□□ -0.61
FARP1-222	ENST00000597777	NOL10	Q9BSC4	688 aa	Known RBP	11.27	□□□□□ -0.61
FARP1-222	ENST00000597777	NAT10	Q9H0A0	1025 aa	Known RBP	11.27	□□□□□ -0.61
FARP1-222	ENST00000597777	FER1L6	Q2WGJ9	1857 aa		11.27	□□□□□ -0.61
FARP1-222	ENST00000597777	PATL2	C9JE40	543 aa	Known RBP	11.26	□□□□□ -0.61
FARP1-222	ENST00000597777	TPM3	P06753	285 aa		11.26	□□□□□ -0.61
FARP1-222	ENST00000597777	PPP4R3B	Q5MIZ7	849 aa		11.26	□□□□□ -0.61
FARP1-222	ENST00000597777	SLF2	Q8IX21	1173 aa		11.26	□□□□□ -0.61
FARP1-222	ENST00000597777	MAGEB6P1	A0A0J9YX57	407 aa		11.26	□□□□□ -0.61
FARP1-222	ENST00000597777	HMGB1	P09429	215 aa	Known RBP	11.26	□□□□□ -0.61
FARP1-222	ENST00000597777	DHX32	Q7L7V1	743 aa	Known RBP	11.26	□□□□□ -0.61
FARP1-222	ENST00000597777	LEO1	Q8WVC0	666 aa	Predicted RBP	11.26	□□□□□ -0.61
FARP1-222	ENST00000597777	RIOK1	Q9BRS2	568 aa	Known RBP	11.26	□□□□□ -0.61
FARP1-222	ENST00000597777	LAMB1	P07942	1786 aa		11.26	□□□□□ -0.61
FARP1-222	ENST00000597777	CHD4	Q14839	1912 aa		11.26	□□□□□ -0.61
FARP1-222	ENST00000597777	LDHC	P07864	332 aa		11.26	□□□□□ -0.61
FARP1-222	ENST00000597777	MCM5	P33992	734 aa		11.26	□□□□□ -0.61
FARP1-222	ENST00000597777	DZIP1	Q86YF9	867 aa	Known RBP	11.26	□□□□□ -0.61
FARP1-222	ENST00000597777	TRMT44	Q8IYL2	757 aa	Known RBP	11.26	□□□□□ -0.61
FARP1-222	ENST00000597777	ZNF384	Q8TF68	577 aa		11.26	□□□□□ -0.61
FARP1-222	ENST00000597777	SKIL	P12757	684 aa		11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	NCOA7	Q8NI08	942 aa		11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	CLIC6	Q96NY7	704 aa		11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	CYP2D7	A0A087X1C5	515 aa		11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	PRDX5	P30044	214 aa		11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	PDCL2	Q8N4E4	241 aa		11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	FAM163A	Q96GL9	167 aa	Predicted RBP	11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	TTC14	Q96N46	770 aa		11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	MPHOSPH10	O00566	681 aa	Known RBP	11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	DYNC1I1	O14576	645 aa		11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	POLR3G	O15318	223 aa	Predicted RBP	11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	SFPQ	P23246	707 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	LONRF3	Q496Y0	759 aa		11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	DALRD3	Q5D0E6	543 aa	Known RBP	11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	MFSD6	Q6ZSS7	791 aa		11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	ADGRA1	Q86SQ6	560 aa		11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	TRIM34	Q9BYJ4	488 aa		11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	MKNK2	Q9HBH9	465 aa		11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	CBX8	Q9HC52	389 aa		11.25	□□□□□ -0.61
FARP1-222	ENST00000597777	IFNK	Q9P0W0	207 aa		11.25	□□□□□ -0.61

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