RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 EDC3Q96F86 508 aaKnown RBP21.71■■□□□ 1.07
CHMP2A-203ENST00000597209 DDX60LQ5H9U9 1706 aaKnown RBP21.7■■□□□ 1.06
CHMP2A-203ENST00000597209 POTEFA5A3E0 1075 aa21.7■■□□□ 1.06
CHMP2A-203ENST00000597209 GDF11O95390 407 aa21.7■■□□□ 1.06
CHMP2A-203ENST00000597209 ADD2P35612 726 aa21.7■■□□□ 1.06
CHMP2A-203ENST00000597209 TMEM106CQ9BVX2 250 aa21.7■■□□□ 1.06
CHMP2A-203ENST00000597209 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.7■■□□□ 1.063e-6■□□□□ 8.5
CHMP2A-203ENST00000597209 BCL11AQ9H165 835 aa21.7■■□□□ 1.06
CHMP2A-203ENST00000597209 MGAMO43451 1857 aa21.7■■□□□ 1.06
CHMP2A-203ENST00000597209 USP17L10C9JJH3 530 aa21.69■■□□□ 1.06
CHMP2A-203ENST00000597209 SMARCA5O60264 1052 aaPredicted RBP21.69■■□□□ 1.06
CHMP2A-203ENST00000597209 GCLCP48506 637 aaPredicted RBP21.69■■□□□ 1.06
CHMP2A-203ENST00000597209 TAOK2Q9UL54 1235 aa21.69■■□□□ 1.06
CHMP2A-203ENST00000597209 MYPNQ86TC9 1320 aa21.69■■□□□ 1.06
CHMP2A-203ENST00000597209 HOXA7P31268 230 aaPredicted RBP21.68■■□□□ 1.06
CHMP2A-203ENST00000597209 PLCD1P51178 756 aa21.68■■□□□ 1.06
CHMP2A-203ENST00000597209 MTMR2Q13614 643 aa21.68■■□□□ 1.06
CHMP2A-203ENST00000597209 FAM110CQ1W6H9 321 aa21.68■■□□□ 1.06
CHMP2A-203ENST00000597209 SLC4A8Q2Y0W8 1093 aa21.68■■□□□ 1.06
CHMP2A-203ENST00000597209 ECHDC1Q9NTX5 307 aa21.68■■□□□ 1.06
CHMP2A-203ENST00000597209 TMOD4Q9NZQ9 345 aa21.68■■□□□ 1.06
CHMP2A-203ENST00000597209 TNRC18O15417 2968 aaPredicted RBP21.67■■□□□ 1.06
CHMP2A-203ENST00000597209 NAV1Q8NEY1 1877 aa21.67■■□□□ 1.06
CHMP2A-203ENST00000597209 POLR3DP05423 398 aaPredicted RBP21.67■■□□□ 1.06
CHMP2A-203ENST00000597209 RRP1P56182 461 aaKnown RBP21.67■■□□□ 1.06
CHMP2A-203ENST00000597209 GABPAQ06546 454 aa21.67■■□□□ 1.06
CHMP2A-203ENST00000597209 UBE3CQ15386 1083 aa21.67■■□□□ 1.06
CHMP2A-203ENST00000597209 SHROOM1Q2M3G4 852 aaPredicted RBP21.67■■□□□ 1.06
CHMP2A-203ENST00000597209 LCORLQ8N3X6 602 aa21.67■■□□□ 1.06
CHMP2A-203ENST00000597209 RAET1EQ8TD07 263 aa21.67■■□□□ 1.06
CHMP2A-203ENST00000597209 SH3TC2Q8TF17 1288 aa21.67■■□□□ 1.06
CHMP2A-203ENST00000597209 ASCC2Q9H1I8 757 aaPredicted RBP21.67■■□□□ 1.06
CHMP2A-203ENST00000597209 DCP1AQ9NPI6 582 aaPredicted RBP21.67■■□□□ 1.06
CHMP2A-203ENST00000597209 ECM2O94769 699 aaPredicted RBP21.66■■□□□ 1.06
CHMP2A-203ENST00000597209 GH2P01242 217 aa21.66■■□□□ 1.06
CHMP2A-203ENST00000597209 PRKCZQ05513 592 aa21.66■■□□□ 1.06
CHMP2A-203ENST00000597209 CERKLQ49MI3 558 aaPredicted RBP21.66■■□□□ 1.06
CHMP2A-203ENST00000597209 ZSCAN25Q6NSZ9 544 aa21.66■■□□□ 1.06
CHMP2A-203ENST00000597209 ANKRD13CQ8N6S4 541 aa21.66■■□□□ 1.06
CHMP2A-203ENST00000597209 MCM9Q9NXL9 1143 aa21.66■■□□□ 1.06
CHMP2A-203ENST00000597209 GRK4P32298 578 aa21.65■■□□□ 1.06
CHMP2A-203ENST00000597209 SHMT1P34896 483 aa21.65■■□□□ 1.06
CHMP2A-203ENST00000597209 USP17L2Q6R6M4 530 aa21.65■■□□□ 1.06
CHMP2A-203ENST00000597209 ARMT1Q9H993 441 aa21.65■■□□□ 1.06
CHMP2A-203ENST00000597209 ATP8A2Q9NTI2 1148 aa21.65■■□□□ 1.06
CHMP2A-203ENST00000597209 PCDHB15Q9Y5E8 787 aa21.65■■□□□ 1.06
CHMP2A-203ENST00000597209 EN2P19622 333 aaPredicted RBP21.64■■□□□ 1.05
CHMP2A-203ENST00000597209 IRF5Q13568 498 aa21.64■■□□□ 1.05
CHMP2A-203ENST00000597209 ABCB5Q2M3G0 1257 aa21.64■■□□□ 1.05
CHMP2A-203ENST00000597209 SDR42E1Q8WUS8 393 aa21.64■■□□□ 1.05
CHMP2A-203ENST00000597209 GPATCH3Q96I76 525 aa21.64■■□□□ 1.05
CHMP2A-203ENST00000597209 C12orf42Q96LP6 360 aa21.64■■□□□ 1.05
CHMP2A-203ENST00000597209 CABP5Q9NP86 173 aa21.64■■□□□ 1.05
CHMP2A-203ENST00000597209 MORF4L1Q9UBU8 362 aa21.64■■□□□ 1.05
CHMP2A-203ENST00000597209 MYH7P12883 1935 aa21.63■■□□□ 1.05
CHMP2A-203ENST00000597209 TNPO2O14787 897 aaKnown RBP21.63■■□□□ 1.05
CHMP2A-203ENST00000597209 MBD4O95243 580 aa21.63■■□□□ 1.05
CHMP2A-203ENST00000597209 IRX3P78415 501 aaPredicted RBP21.63■■□□□ 1.05
CHMP2A-203ENST00000597209 SLAIN1Q8ND83 568 aa21.63■■□□□ 1.05
CHMP2A-203ENST00000597209 EMILIN3Q9NT22 766 aa21.63■■□□□ 1.05
CHMP2A-203ENST00000597209 GABRQQ9UN88 632 aa21.63■■□□□ 1.05
CHMP2A-203ENST00000597209 USP14P54578 494 aa21.62■■□□□ 1.05
CHMP2A-203ENST00000597209 PXYLP1Q8TE99 480 aa21.62■■□□□ 1.05
CHMP2A-203ENST00000597209 GTF3C2Q8WUA4 911 aaPredicted RBP21.62■■□□□ 1.05
CHMP2A-203ENST00000597209 COA7Q96BR5 231 aa21.62■■□□□ 1.05
CHMP2A-203ENST00000597209 P2RX7Q99572 595 aaKnown RBP21.62■■□□□ 1.05
CHMP2A-203ENST00000597209 SWAP70Q9UH65 585 aa21.62■■□□□ 1.05
CHMP2A-203ENST00000597209 KIAA0100Q14667 2235 aaKnown RBP21.61■■□□□ 1.05
CHMP2A-203ENST00000597209 PRKAB2O43741 272 aa21.61■■□□□ 1.05
CHMP2A-203ENST00000597209 FLT3LGP49771 235 aa21.61■■□□□ 1.05
CHMP2A-203ENST00000597209 SLFNL1Q499Z3 407 aa21.61■■□□□ 1.05
CHMP2A-203ENST00000597209 KIAA1683Q9H0B3 1180 aa21.61■■□□□ 1.05
CHMP2A-203ENST00000597209 GUCY1A2P33402 732 aa21.6■■□□□ 1.05
CHMP2A-203ENST00000597209 HERVK_113P62684 666 aa21.6■■□□□ 1.05
CHMP2A-203ENST00000597209 UBXN2AP68543 259 aa21.6■■□□□ 1.05
CHMP2A-203ENST00000597209 RAB3GAP1Q15042 981 aa21.6■■□□□ 1.05
CHMP2A-203ENST00000597209 PRPF38BQ5VTL8 546 aaKnown RBP21.6■■□□□ 1.05
CHMP2A-203ENST00000597209 KBTBD3Q8NAB2 608 aa21.6■■□□□ 1.05
CHMP2A-203ENST00000597209 PDE4DIPQ5VU43 2346 aa21.6■■□□□ 1.05
CHMP2A-203ENST00000597209 TTC41PQ6P2S7 1318 aa21.59■■□□□ 1.05
CHMP2A-203ENST00000597209 ADCY3O60266 1144 aa21.59■■□□□ 1.05
CHMP2A-203ENST00000597209 CHGBP05060 677 aa21.59■■□□□ 1.05
CHMP2A-203ENST00000597209 MTFR1Q15390 333 aa21.59■■□□□ 1.05
CHMP2A-203ENST00000597209 FEZ1Q99689 392 aa21.59■■□□□ 1.05
CHMP2A-203ENST00000597209 PUS7LQ9H0K6 701 aaKnown RBP21.59■■□□□ 1.05
CHMP2A-203ENST00000597209 USP17L15C9J2P7 530 aa21.58■■□□□ 1.05
CHMP2A-203ENST00000597209 USP17L13C9JLJ4 530 aa21.58■■□□□ 1.05
CHMP2A-203ENST00000597209 USP17L11C9JVI0 530 aa21.58■■□□□ 1.05
CHMP2A-203ENST00000597209 USP17L18D6R9N7 530 aa21.58■■□□□ 1.05
CHMP2A-203ENST00000597209 USP17L22D6RA61 530 aa21.58■■□□□ 1.05
CHMP2A-203ENST00000597209 USP17L17D6RBQ6 530 aa21.58■■□□□ 1.05
CHMP2A-203ENST00000597209 USP17L19D6RCP7 530 aa21.58■■□□□ 1.05
CHMP2A-203ENST00000597209 USP17L20D6RJB6 530 aa21.58■■□□□ 1.05
CHMP2A-203ENST00000597209 CYP2D6P10635 497 aa21.58■■□□□ 1.05
CHMP2A-203ENST00000597209 EVX2Q03828 476 aa21.58■■□□□ 1.05
CHMP2A-203ENST00000597209 USP17L24Q0WX57 530 aa21.58■■□□□ 1.05
CHMP2A-203ENST00000597209 C12orf60Q5U649 245 aa21.58■■□□□ 1.05
CHMP2A-203ENST00000597209 AMOTL1Q8IY63 956 aa21.58■■□□□ 1.05
CHMP2A-203ENST00000597209 NKX2-3Q8TAU0 364 aa21.58■■□□□ 1.05
CHMP2A-203ENST00000597209 DDRGK1Q96HY6 314 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms