RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ADGRA1Q86SQ6 560 aa12.92□□□□□ -0.34
CHMP2A-202ENST00000596708 FTSJ3Q8IY81 847 aaKnown RBP12.92□□□□□ -0.34
CHMP2A-202ENST00000596708 P2RX7Q99572 595 aaKnown RBP12.92□□□□□ -0.34
CHMP2A-202ENST00000596708 WDR18Q9BV38 432 aa12.92□□□□□ -0.34
CHMP2A-202ENST00000596708 CCDC8Q9H0W5 538 aaPredicted RBP12.92□□□□□ -0.34
CHMP2A-202ENST00000596708 SAP30BPQ9UHR5 308 aaKnown RBP12.92□□□□□ -0.34
CHMP2A-202ENST00000596708 GJD2Q9UKL4 321 aa12.92□□□□□ -0.34
CHMP2A-202ENST00000596708 RPTORQ8N122 1335 aa12.91□□□□□ -0.34
CHMP2A-202ENST00000596708 DDX60LQ5H9U9 1706 aaKnown RBP12.91□□□□□ -0.34
CHMP2A-202ENST00000596708 USP17L10C9JJH3 530 aa12.91□□□□□ -0.34
CHMP2A-202ENST00000596708 CYP2B6P20813 491 aa12.91□□□□□ -0.34
CHMP2A-202ENST00000596708 CYP7A1P22680 504 aa12.91□□□□□ -0.34
CHMP2A-202ENST00000596708 HOXA7P31268 230 aaPredicted RBP12.91□□□□□ -0.34
CHMP2A-202ENST00000596708 NECAB2Q7Z6G3 386 aa12.91□□□□□ -0.34
CHMP2A-202ENST00000596708 ITPRIPQ8IWB1 547 aa12.91□□□□□ -0.34
CHMP2A-202ENST00000596708 CCAR1Q8IX12 1150 aaKnown RBP12.91□□□□□ -0.34
CHMP2A-202ENST00000596708 ZNF512BQ96KM6 892 aaPredicted RBP12.91□□□□□ -0.34
CHMP2A-202ENST00000596708 CRISPLD2Q9H0B8 497 aa12.91□□□□□ -0.34
CHMP2A-202ENST00000596708 DNAJC18Q9H819 358 aa12.91□□□□□ -0.34
CHMP2A-202ENST00000596708 HMX1Q9NP08 348 aaPredicted RBP12.91□□□□□ -0.34
CHMP2A-202ENST00000596708 PIH1D3Q9NQM4 214 aaKnown RBP12.91□□□□□ -0.34
CHMP2A-202ENST00000596708 MORF4L1Q9UBU8 362 aa12.91□□□□□ -0.34
CHMP2A-202ENST00000596708 PEX10O60683 326 aa12.9□□□□□ -0.34
CHMP2A-202ENST00000596708 IGSF3O75054 1194 aa12.9□□□□□ -0.34
CHMP2A-202ENST00000596708 IDH1O75874 414 aaKnown RBP12.9□□□□□ -0.34
CHMP2A-202ENST00000596708 USP5P45974 858 aa12.9□□□□□ -0.34
CHMP2A-202ENST00000596708 JAG1P78504 1218 aa12.9□□□□□ -0.34
CHMP2A-202ENST00000596708 TRIM32Q13049 653 aa12.9□□□□□ -0.34
CHMP2A-202ENST00000596708 GPRC5AQ8NFJ5 357 aa12.9□□□□□ -0.34
CHMP2A-202ENST00000596708 DIS3LQ8TF46 1054 aaKnown RBP12.9□□□□□ -0.34
CHMP2A-202ENST00000596708 NUDT12Q9BQG2 462 aa12.9□□□□□ -0.34
CHMP2A-202ENST00000596708 GINM1Q9NU53 330 aa12.9□□□□□ -0.34
CHMP2A-202ENST00000596708 ZBTB21Q9ULJ3 1066 aa12.9□□□□□ -0.34
CHMP2A-202ENST00000596708 ZNFX1Q9P2E3 1918 aaKnown RBP12.9□□□□□ -0.35
CHMP2A-202ENST00000596708 HERVK_113P62684 666 aa12.89□□□□□ -0.35
CHMP2A-202ENST00000596708 PDE3AQ14432 1141 aa12.89□□□□□ -0.35
CHMP2A-202ENST00000596708 SHROOM1Q2M3G4 852 aaPredicted RBP12.89□□□□□ -0.35
CHMP2A-202ENST00000596708 METTL16Q86W50 562 aaKnown RBP12.89□□□□□ -0.35
CHMP2A-202ENST00000596708 ANKLE1Q8NAG6 615 aa12.89□□□□□ -0.35
CHMP2A-202ENST00000596708 MIGA1Q8NAN2 632 aa12.89□□□□□ -0.35
CHMP2A-202ENST00000596708 EAF2Q96CJ1 260 aaPredicted RBP12.89□□□□□ -0.35
CHMP2A-202ENST00000596708 PAGR1Q9BTK6 254 aa12.89□□□□□ -0.35
CHMP2A-202ENST00000596708 TXNRD2Q9NNW7 524 aa12.89□□□□□ -0.35
CHMP2A-202ENST00000596708 TLR7Q9NYK1 1049 aaKnown RBP12.89□□□□□ -0.35
CHMP2A-202ENST00000596708 STAP2Q9UGK3 403 aa12.89□□□□□ -0.35
CHMP2A-202ENST00000596708 DBNLQ9UJU6 430 aaKnown RBP12.89□□□□□ -0.35
CHMP2A-202ENST00000596708 NOP58Q9Y2X3 529 aaKnown RBP12.89□□□□□ -0.35
CHMP2A-202ENST00000596708 FRMPD3Q5JV73 1810 aa12.88□□□□□ -0.35
CHMP2A-202ENST00000596708 ZYXQ15942 572 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-202ENST00000596708 Q3C1V9 767 aa12.88□□□□□ -0.35
CHMP2A-202ENST00000596708 USP17L2Q6R6M4 530 aa12.88□□□□□ -0.35
CHMP2A-202ENST00000596708 MAGEB6Q8N7X4 407 aa12.88□□□□□ -0.35
CHMP2A-202ENST00000596708 TRIB2Q92519 343 aa12.88□□□□□ -0.35
CHMP2A-202ENST00000596708 PRO3102Q9H379 93 aa12.88□□□□□ -0.35
CHMP2A-202ENST00000596708 CWC22Q9HCG8 908 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-202ENST00000596708 RBPJLQ9UBG7 517 aa12.88□□□□□ -0.35
CHMP2A-202ENST00000596708 NDUFB9Q9Y6M9 179 aa12.88□□□□□ -0.35
CHMP2A-202ENST00000596708 NAV1Q8NEY1 1877 aa12.88□□□□□ -0.35
CHMP2A-202ENST00000596708 GH2P01242 217 aa12.87□□□□□ -0.35
CHMP2A-202ENST00000596708 MAPK4P31152 587 aa12.87□□□□□ -0.35
CHMP2A-202ENST00000596708 ERVK-9P63128 1117 aa12.87□□□□□ -0.35
CHMP2A-202ENST00000596708 ERVK-24P63145 666 aa12.87□□□□□ -0.35
CHMP2A-202ENST00000596708 HNRNPUQ00839 825 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHMP2A-202ENST00000596708 MAP3K12Q12852 859 aa12.87□□□□□ -0.35
CHMP2A-202ENST00000596708 C7orf61Q8IZ16 206 aa12.87□□□□□ -0.35
CHMP2A-202ENST00000596708 GTF3C2Q8WUA4 911 aaPredicted RBP12.87□□□□□ -0.35
CHMP2A-202ENST00000596708 SOCS4Q8WXH5 440 aa12.87□□□□□ -0.35
CHMP2A-202ENST00000596708 FEZ1Q99689 392 aa12.87□□□□□ -0.35
CHMP2A-202ENST00000596708 NBPF3Q9H094 633 aa12.87□□□□□ -0.35
CHMP2A-202ENST00000596708 C11orf49Q9H6J7 331 aa12.87□□□□□ -0.35
CHMP2A-202ENST00000596708 EMILIN3Q9NT22 766 aa12.87□□□□□ -0.35
CHMP2A-202ENST00000596708 BAZ2AQ9UIF9 1905 aaKnown RBP12.87□□□□□ -0.35
CHMP2A-202ENST00000596708 A0A1W2PPC1 479 aa12.86□□□□□ -0.35
CHMP2A-202ENST00000596708 RLBP1P12271 317 aa12.86□□□□□ -0.35
CHMP2A-202ENST00000596708 XRCC5P13010 732 aaKnown RBP12.86□□□□□ -0.35
CHMP2A-202ENST00000596708 PRKAR2AP13861 404 aaKnown RBP12.86□□□□□ -0.35
CHMP2A-202ENST00000596708 ZKSCAN1P17029 563 aaPredicted RBP12.86□□□□□ -0.35
CHMP2A-202ENST00000596708 RAB3GAP1Q15042 981 aa12.86□□□□□ -0.35
CHMP2A-202ENST00000596708 GPR142Q7Z601 462 aa12.86□□□□□ -0.35
CHMP2A-202ENST00000596708 PLEKHH3Q7Z736 793 aa12.86□□□□□ -0.35
CHMP2A-202ENST00000596708 TTC6Q86TZ1 520 aa12.86□□□□□ -0.35
CHMP2A-202ENST00000596708 CERS3Q8IU89 383 aa12.86□□□□□ -0.35
CHMP2A-202ENST00000596708 TRMT44Q8IYL2 757 aaKnown RBP12.86□□□□□ -0.35
CHMP2A-202ENST00000596708 ANTXR1Q9H6X2 564 aa12.86□□□□□ -0.35
CHMP2A-202ENST00000596708 CABP5Q9NP86 173 aa12.86□□□□□ -0.35
CHMP2A-202ENST00000596708 SERPINB13Q9UIV8 391 aa12.86□□□□□ -0.35
CHMP2A-202ENST00000596708 ZMYND8Q9ULU4 1186 aaPredicted RBP12.86□□□□□ -0.35
CHMP2A-202ENST00000596708 EXOC6BQ9Y2D4 811 aa12.86□□□□□ -0.35
CHMP2A-202ENST00000596708 MYH7P12883 1935 aa12.86□□□□□ -0.35
CHMP2A-202ENST00000596708 USP17L15C9J2P7 530 aa12.85□□□□□ -0.35
CHMP2A-202ENST00000596708 USP17L13C9JLJ4 530 aa12.85□□□□□ -0.35
CHMP2A-202ENST00000596708 USP17L11C9JVI0 530 aa12.85□□□□□ -0.35
CHMP2A-202ENST00000596708 USP17L18D6R9N7 530 aa12.85□□□□□ -0.35
CHMP2A-202ENST00000596708 USP17L22D6RA61 530 aa12.85□□□□□ -0.35
CHMP2A-202ENST00000596708 USP17L17D6RBQ6 530 aa12.85□□□□□ -0.35
CHMP2A-202ENST00000596708 USP17L19D6RCP7 530 aa12.85□□□□□ -0.35
CHMP2A-202ENST00000596708 USP17L20D6RJB6 530 aa12.85□□□□□ -0.35
CHMP2A-202ENST00000596708 RGS2P41220 211 aa12.85□□□□□ -0.35
CHMP2A-202ENST00000596708 USP17L24Q0WX57 530 aa12.85□□□□□ -0.35
CHMP2A-202ENST00000596708 ABCB5Q2M3G0 1257 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms