RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 MAP2K2P36507 400 aa16.78■□□□□ 0.28
MBD1-225ENST00000591535 KIF23Q02241 960 aaPredicted RBP16.78■□□□□ 0.28
MBD1-225ENST00000591535 PPATQ06203 517 aa16.78■□□□□ 0.28
MBD1-225ENST00000591535 PPARAQ07869 468 aa16.78■□□□□ 0.28
MBD1-225ENST00000591535 ABCB5Q2M3G0 1257 aa16.78■□□□□ 0.28
MBD1-225ENST00000591535 KIAA1211Q6ZU35 1233 aa16.78■□□□□ 0.28
MBD1-225ENST00000591535 C16orf86Q6ZW13 317 aa16.78■□□□□ 0.28
MBD1-225ENST00000591535 ZIC5Q96T25 663 aa16.78■□□□□ 0.28
MBD1-225ENST00000591535 CABP5Q9NP86 173 aa16.78■□□□□ 0.28
MBD1-225ENST00000591535 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.78■□□□□ 0.28
MBD1-225ENST00000591535 LAMB1P07942 1786 aa16.78■□□□□ 0.28
MBD1-225ENST00000591535 ASNSP08243 561 aa16.78■□□□□ 0.28
MBD1-225ENST00000591535 PTPRAP18433 802 aa16.78■□□□□ 0.28
MBD1-225ENST00000591535 ZNF287Q9HBT7 754 aa16.78■□□□□ 0.28
MBD1-225ENST00000591535 TAOK2Q9UL54 1235 aa16.78■□□□□ 0.28
MBD1-225ENST00000591535 GH2P01242 217 aa16.77■□□□□ 0.27
MBD1-225ENST00000591535 GJA5P36382 358 aa16.77■□□□□ 0.27
MBD1-225ENST00000591535 CTDSPL2Q05D32 466 aa16.77■□□□□ 0.27
MBD1-225ENST00000591535 PDE4BQ07343 736 aa16.77■□□□□ 0.27
MBD1-225ENST00000591535 PPIL2Q13356 520 aa16.77■□□□□ 0.27
MBD1-225ENST00000591535 RAB3GAP1Q15042 981 aa16.77■□□□□ 0.27
MBD1-225ENST00000591535 CCDC84Q86UT8 332 aaPredicted RBP16.77■□□□□ 0.27
MBD1-225ENST00000591535 ESYT1Q9BSJ8 1104 aa16.77■□□□□ 0.27
MBD1-225ENST00000591535 DSCC1Q9BVC3 393 aa16.77■□□□□ 0.27
MBD1-225ENST00000591535 CTNNA3Q9UI47 895 aa16.77■□□□□ 0.27
MBD1-225ENST00000591535 ZBTB21Q9ULJ3 1066 aa16.77■□□□□ 0.27
MBD1-225ENST00000591535 IRF6O14896 467 aa16.76■□□□□ 0.27
MBD1-225ENST00000591535 HAND2P61296 217 aa16.76■□□□□ 0.27
MBD1-225ENST00000591535 JAG1P78504 1218 aa16.76■□□□□ 0.27
MBD1-225ENST00000591535 SHROOM1Q2M3G4 852 aaPredicted RBP16.76■□□□□ 0.27
MBD1-225ENST00000591535 USP17L5A8MUK1 530 aa16.75■□□□□ 0.27
MBD1-225ENST00000591535 ZNF213O14771 459 aa16.75■□□□□ 0.27
MBD1-225ENST00000591535 PRDM1O75626 825 aa16.75■□□□□ 0.27
MBD1-225ENST00000591535 ZNF444Q8N0Y2 327 aaPredicted RBP16.75■□□□□ 0.27
MBD1-225ENST00000591535 AS3MTQ9HBK9 375 aa16.75■□□□□ 0.27
MBD1-225ENST00000591535 GINM1Q9NU53 330 aa16.75■□□□□ 0.27
MBD1-225ENST00000591535 ZMYM6O95789 1325 aa16.75■□□□□ 0.27
MBD1-225ENST00000591535 MANSC4A6NHS7 340 aaPredicted RBP16.74■□□□□ 0.27
MBD1-225ENST00000591535 TRIM75PA6NK02 468 aa16.74■□□□□ 0.27
MBD1-225ENST00000591535 AKR1B1P15121 316 aa16.74■□□□□ 0.27
MBD1-225ENST00000591535 GTF2A2P52657 109 aa16.74■□□□□ 0.27
MBD1-225ENST00000591535 PTH1RQ03431 593 aa16.74■□□□□ 0.27
MBD1-225ENST00000591535 SREBF2Q12772 1141 aa16.74■□□□□ 0.27
MBD1-225ENST00000591535 SNAPC2Q13487 334 aa16.74■□□□□ 0.27
MBD1-225ENST00000591535 IMMTQ16891 758 aaKnown RBP16.74■□□□□ 0.27
MBD1-225ENST00000591535 REM2Q8IYK8 340 aaPredicted RBP16.74■□□□□ 0.27
MBD1-225ENST00000591535 CCDC17Q96LX7 622 aa16.74■□□□□ 0.27
MBD1-225ENST00000591535 BEGAINQ9BUH8 593 aa16.74■□□□□ 0.27
MBD1-225ENST00000591535 ANO2Q9NQ90 1003 aa16.74■□□□□ 0.27
MBD1-225ENST00000591535 TOMM22Q9NS69 142 aa16.74■□□□□ 0.27
MBD1-225ENST00000591535 ROBO3Q96MS0 1386 aa16.74■□□□□ 0.27
MBD1-225ENST00000591535 MAP2K1Q02750 393 aaPredicted RBP16.74■□□□□ 0.27
MBD1-225ENST00000591535 ANAPC4Q9UJX5 808 aa16.74■□□□□ 0.27
MBD1-225ENST00000591535 AFG3L2Q9Y4W6 797 aa16.74■□□□□ 0.27
MBD1-225ENST00000591535 CCL15-CCL14A0A0B4J2E2 113 aa16.73■□□□□ 0.27
MBD1-225ENST00000591535 INHBEP58166 350 aa16.73■□□□□ 0.27
MBD1-225ENST00000591535 SPP2Q13103 211 aa16.73■□□□□ 0.27
MBD1-225ENST00000591535 SEPT2Q15019 361 aa16.73■□□□□ 0.27
MBD1-225ENST00000591535 CCL15Q16663 113 aa16.73■□□□□ 0.27
MBD1-225ENST00000591535 TMEM179Q6ZVK1 233 aa16.73■□□□□ 0.27
MBD1-225ENST00000591535 ZNF280CQ8ND82 737 aa16.73■□□□□ 0.27
MBD1-225ENST00000591535 TBC1D2Q9BYX2 928 aa16.73■□□□□ 0.27
MBD1-225ENST00000591535 INCENPQ9NQS7 918 aa16.73■□□□□ 0.27
MBD1-225ENST00000591535 U3KPZ7 1027 aaPredicted RBP16.73■□□□□ 0.27
MBD1-225ENST00000591535 CXCL11O14625 94 aa16.72■□□□□ 0.27
MBD1-225ENST00000591535 CETPP11597 493 aa16.72■□□□□ 0.27
MBD1-225ENST00000591535 RASA1P20936 1047 aa16.72■□□□□ 0.27
MBD1-225ENST00000591535 RRP12Q5JTH9 1297 aaKnown RBP16.72■□□□□ 0.27
MBD1-225ENST00000591535 MFSD6Q6ZSS7 791 aa16.72■□□□□ 0.27
MBD1-225ENST00000591535 JMYQ8N9B5 988 aa16.72■□□□□ 0.27
MBD1-225ENST00000591535 MS4A4AQ96JQ5 239 aa16.72■□□□□ 0.27
MBD1-225ENST00000591535 PHIPQ8WWQ0 1821 aa16.72■□□□□ 0.27
MBD1-225ENST00000591535 RANBP6O60518 1105 aaKnown RBP16.71■□□□□ 0.27
MBD1-225ENST00000591535 TSPY3P0CV98 308 aa16.71■□□□□ 0.27
MBD1-225ENST00000591535 TSPY8P0CW00 308 aa16.71■□□□□ 0.27
MBD1-225ENST00000591535 KCNH4Q9UQ05 1017 aa16.71■□□□□ 0.27
MBD1-225ENST00000591535 TM4SF4P48230 202 aa16.7■□□□□ 0.26
MBD1-225ENST00000591535 ATP2B2Q01814 1243 aa16.7■□□□□ 0.26
MBD1-225ENST00000591535 FAM47AQ5JRC9 791 aa16.7■□□□□ 0.26
MBD1-225ENST00000591535 AKNAD1Q5T1N1 836 aa16.7■□□□□ 0.26
MBD1-225ENST00000591535 OTUD7BQ6GQQ9 843 aa16.7■□□□□ 0.26
MBD1-225ENST00000591535 MAP4K1Q92918 833 aa16.7■□□□□ 0.26
MBD1-225ENST00000591535 FEZ1Q99689 392 aa16.7■□□□□ 0.26
MBD1-225ENST00000591535 WDR18Q9BV38 432 aa16.7■□□□□ 0.26
MBD1-225ENST00000591535 RNF41Q9H4P4 317 aaPredicted RBP16.7■□□□□ 0.26
MBD1-225ENST00000591535 THSD7BQ9C0I4 1608 aa16.7■□□□□ 0.26
MBD1-225ENST00000591535 TSPY2A6NKD2 308 aa16.7■□□□□ 0.26
MBD1-225ENST00000591535 USP17L10C9JJH3 530 aa16.7■□□□□ 0.26
MBD1-225ENST00000591535 GUCY1A2P33402 732 aa16.7■□□□□ 0.26
MBD1-225ENST00000591535 TFAP4Q01664 338 aa16.7■□□□□ 0.26
MBD1-225ENST00000591535 MTMR2Q13614 643 aa16.7■□□□□ 0.26
MBD1-225ENST00000591535 GADL1Q6ZQY3 521 aa16.7■□□□□ 0.26
MBD1-225ENST00000591535 BRI3BPQ8WY22 251 aa16.7■□□□□ 0.26
MBD1-225ENST00000591535 LSG1Q9H089 658 aaKnown RBP16.7■□□□□ 0.26
MBD1-225ENST00000591535 RBM8AQ9Y5S9 174 aaKnown RBP16.7■□□□□ 0.26
MBD1-225ENST00000591535 LAMA4Q16363 1823 aa16.69■□□□□ 0.26
MBD1-225ENST00000591535 HMGCS2P54868 508 aa16.69■□□□□ 0.26
MBD1-225ENST00000591535 ICA1Q05084 483 aa16.69■□□□□ 0.26
MBD1-225ENST00000591535 ZYXQ15942 572 aaKnown RBP16.69■□□□□ 0.26
MBD1-225ENST00000591535 FASTKD5Q7L8L6 764 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms