RNA–Protein interactions for RNA: ENST00000591474.5

CXXC1-216, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-216ENST00000591474 LAMA3Q16787 3333 aa27.59■■■□□ 2.01
CXXC1-216ENST00000591474 IRX3P78415 501 aaPredicted RBP27.59■■■□□ 2.01
CXXC1-216ENST00000591474 ANKLE1Q8NAG6 615 aa27.59■■■□□ 2.01
CXXC1-216ENST00000591474 PAWRQ96IZ0 340 aaKnown RBP27.59■■■□□ 2.01
CXXC1-216ENST00000591474 C19orf81C9J6K1 198 aa27.58■■■□□ 2.01
CXXC1-216ENST00000591474 JAG1P78504 1218 aa27.58■■■□□ 2.01
CXXC1-216ENST00000591474 RPTORQ8N122 1335 aa27.58■■■□□ 2.01
CXXC1-216ENST00000591474 A0A1W2PPC1 479 aa27.57■■■□□ 2
CXXC1-216ENST00000591474 SURF6O75683 361 aaKnown RBP27.57■■■□□ 2
CXXC1-216ENST00000591474 ZAP70P43403 619 aa27.57■■■□□ 2
CXXC1-216ENST00000591474 NECAB2Q7Z6G3 386 aa27.57■■■□□ 2
CXXC1-216ENST00000591474 CRACR2BQ8N4Y2 399 aaPredicted RBP27.57■■■□□ 2
CXXC1-216ENST00000591474 TRIM34Q9BYJ4 488 aa27.57■■■□□ 2
CXXC1-216ENST00000591474 PALD1Q9ULE6 856 aa27.57■■■□□ 2
CXXC1-216ENST00000591474 NOP58Q9Y2X3 529 aaKnown RBP27.57■■■□□ 2
CXXC1-216ENST00000591474 USP17L10C9JJH3 530 aa27.56■■■□□ 2
CXXC1-216ENST00000591474 P2RX7Q99572 595 aaKnown RBP27.56■■■□□ 2
CXXC1-216ENST00000591474 HMX1Q9NP08 348 aaPredicted RBP27.56■■■□□ 2
CXXC1-216ENST00000591474 ZBTB21Q9ULJ3 1066 aa27.56■■■□□ 2
CXXC1-216ENST00000591474 HLA-DOAP06340 250 aa27.55■■■□□ 2
CXXC1-216ENST00000591474 HERVK_113P62684 666 aa27.55■■■□□ 2
CXXC1-216ENST00000591474 TRIM32Q13049 653 aa27.55■■■□□ 2
CXXC1-216ENST00000591474 SHROOM1Q2M3G4 852 aaPredicted RBP27.55■■■□□ 2
CXXC1-216ENST00000591474 DIS3LQ8TF46 1054 aaKnown RBP27.55■■■□□ 2
CXXC1-216ENST00000591474 PIH1D3Q9NQM4 214 aaKnown RBP27.55■■■□□ 2
CXXC1-216ENST00000591474 DBNLQ9UJU6 430 aaKnown RBP27.55■■■□□ 2
CXXC1-216ENST00000591474 GDF11O95390 407 aa27.54■■■□□ 2
CXXC1-216ENST00000591474 TRIB2Q92519 343 aa27.54■■■□□ 2
CXXC1-216ENST00000591474 C1orf115Q9H7X2 142 aa27.54■■■□□ 2
CXXC1-216ENST00000591474 TXNRD2Q9NNW7 524 aa27.54■■■□□ 2
CXXC1-216ENST00000591474 MYH1P12882 1939 aa27.53■■■□□ 2
CXXC1-216ENST00000591474 GPRC5AQ8NFJ5 357 aa27.53■■■□□ 2
CXXC1-216ENST00000591474 GTF3C2Q8WUA4 911 aaPredicted RBP27.53■■■□□ 2
CXXC1-216ENST00000591474 SOCS4Q8WXH5 440 aa27.53■■■□□ 2
CXXC1-216ENST00000591474 XRCC5P13010 732 aaKnown RBP27.52■■■□□ 2
CXXC1-216ENST00000591474 DYNLL1P63167 89 aaKnown RBP27.52■■■□□ 2
CXXC1-216ENST00000591474 MAP3K21Q5TCX8 1036 aa27.52■■■□□ 2
CXXC1-216ENST00000591474 CERS3Q8IU89 383 aa27.52■■■□□ 2
CXXC1-216ENST00000591474 NUDT12Q9BQG2 462 aa27.52■■■□□ 2
CXXC1-216ENST00000591474 TLR7Q9NYK1 1049 aaKnown RBP27.52■■■□□ 2
CXXC1-216ENST00000591474 SAP30BPQ9UHR5 308 aaKnown RBP27.52■■■□□ 2
CXXC1-216ENST00000591474 DDX60LQ5H9U9 1706 aaKnown RBP27.51■■□□□ 1.99
CXXC1-216ENST00000591474 CYP7A1P22680 504 aa27.51■■□□□ 1.99
CXXC1-216ENST00000591474 FTSJ3Q8IY81 847 aaKnown RBP27.51■■□□□ 1.99
CXXC1-216ENST00000591474 RBPJLQ9UBG7 517 aa27.51■■□□□ 1.99
CXXC1-216ENST00000591474 PEX10O60683 326 aa27.5■■□□□ 1.99
CXXC1-216ENST00000591474 CYP2B6P20813 491 aa27.5■■□□□ 1.99
CXXC1-216ENST00000591474 MAPK4P31152 587 aa27.5■■□□□ 1.99
CXXC1-216ENST00000591474 MNX1P50219 401 aaPredicted RBP27.5■■□□□ 1.99
CXXC1-216ENST00000591474 ERVK-9P63128 1117 aa27.5■■□□□ 1.99
CXXC1-216ENST00000591474 ERVK-24P63145 666 aa27.5■■□□□ 1.99
CXXC1-216ENST00000591474 EAF2Q96CJ1 260 aaPredicted RBP27.5■■□□□ 1.99
CXXC1-216ENST00000591474 NBPF3Q9H094 633 aa27.5■■□□□ 1.99
CXXC1-216ENST00000591474 CCDC8Q9H0W5 538 aaPredicted RBP27.5■■□□□ 1.99
CXXC1-216ENST00000591474 EMILIN3Q9NT22 766 aa27.5■■□□□ 1.99
CXXC1-216ENST00000591474 OGDHLQ9ULD0 1010 aa27.5■■□□□ 1.99
CXXC1-216ENST00000591474 IDH1O75874 414 aaKnown RBP27.49■■□□□ 1.99
CXXC1-216ENST00000591474 USP17L2Q6R6M4 530 aa27.49■■□□□ 1.99
CXXC1-216ENST00000591474 TRMT44Q8IYL2 757 aaKnown RBP27.49■■□□□ 1.99
CXXC1-216ENST00000591474 STAP2Q9UGK3 403 aa27.49■■□□□ 1.99
CXXC1-216ENST00000591474 PDE3AQ14432 1141 aa27.48■■□□□ 1.99
CXXC1-216ENST00000591474 TATDN1Q6P1N9 297 aa27.48■■□□□ 1.99
CXXC1-216ENST00000591474 TMED8Q6PL24 325 aaPredicted RBP27.48■■□□□ 1.99
CXXC1-216ENST00000591474 ITPRIPQ8IWB1 547 aa27.48■■□□□ 1.99
CXXC1-216ENST00000591474 USP6NLQ92738 828 aa27.48■■□□□ 1.99
CXXC1-216ENST00000591474 C12orf42Q96LP6 360 aa27.48■■□□□ 1.99
CXXC1-216ENST00000591474 GH2P01242 217 aa27.47■■□□□ 1.99
CXXC1-216ENST00000591474 PRKAR2AP13861 404 aaKnown RBP27.47■■□□□ 1.99
CXXC1-216ENST00000591474 Q3C1V9 767 aa27.47■■□□□ 1.99
CXXC1-216ENST00000591474 EHD4Q9H223 541 aa27.47■■□□□ 1.99
CXXC1-216ENST00000591474 C11orf49Q9H6J7 331 aa27.47■■□□□ 1.99
CXXC1-216ENST00000591474 RLBP1P12271 317 aa27.46■■□□□ 1.99
CXXC1-216ENST00000591474 USP5P45974 858 aa27.46■■□□□ 1.99
CXXC1-216ENST00000591474 POTEEQ6S8J3 1075 aa27.46■■□□□ 1.99
CXXC1-216ENST00000591474 GPR142Q7Z601 462 aa27.46■■□□□ 1.99
CXXC1-216ENST00000591474 C7orf61Q8IZ16 206 aa27.46■■□□□ 1.99
CXXC1-216ENST00000591474 MAGEB6Q8N7X4 407 aa27.46■■□□□ 1.99
CXXC1-216ENST00000591474 MIGA1Q8NAN2 632 aa27.46■■□□□ 1.99
CXXC1-216ENST00000591474 GDF15Q99988 308 aa27.46■■□□□ 1.99
CXXC1-216ENST00000591474 PORCNQ9H237 461 aa27.46■■□□□ 1.99
CXXC1-216ENST00000591474 ZKSCAN1P17029 563 aaPredicted RBP27.45■■□□□ 1.98
CXXC1-216ENST00000591474 BMP8BP34820 402 aa27.45■■□□□ 1.98
CXXC1-216ENST00000591474 MORN1Q5T089 497 aa27.45■■□□□ 1.98
CXXC1-216ENST00000591474 PAGR1Q9BTK6 254 aa27.45■■□□□ 1.98
CXXC1-216ENST00000591474 SERPINB13Q9UIV8 391 aa27.45■■□□□ 1.98
CXXC1-216ENST00000591474 RGS2P41220 211 aa27.44■■□□□ 1.98
CXXC1-216ENST00000591474 PLEKHH3Q7Z736 793 aa27.44■■□□□ 1.98
CXXC1-216ENST00000591474 CCAR1Q8IX12 1150 aaKnown RBP27.44■■□□□ 1.98
CXXC1-216ENST00000591474 SOX1O00570 391 aaPredicted RBP27.43■■□□□ 1.98
CXXC1-216ENST00000591474 CACNB2Q08289 660 aaPredicted RBP27.43■■□□□ 1.98
CXXC1-216ENST00000591474 MAP3K12Q12852 859 aa27.43■■□□□ 1.98
CXXC1-216ENST00000591474 CEP85Q6P2H3 762 aa27.43■■□□□ 1.98
CXXC1-216ENST00000591474 APBA2Q99767 749 aa27.43■■□□□ 1.98
CXXC1-216ENST00000591474 ANTXR1Q9H6X2 564 aa27.43■■□□□ 1.98
CXXC1-216ENST00000591474 RABGAP1Q9Y3P9 1069 aa27.43■■□□□ 1.98
CXXC1-216ENST00000591474 NDUFB9Q9Y6M9 179 aa27.43■■□□□ 1.98
CXXC1-216ENST00000591474 USP17L15C9J2P7 530 aa27.42■■□□□ 1.98
CXXC1-216ENST00000591474 USP17L13C9JLJ4 530 aa27.42■■□□□ 1.98
CXXC1-216ENST00000591474 USP17L11C9JVI0 530 aa27.42■■□□□ 1.98
CXXC1-216ENST00000591474 USP17L18D6R9N7 530 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms