RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 EXOC1Q9NV70 894 aa12.94□□□□□ -0.34
SEH1L-208ENST00000590843 HERC5Q9UII4 1024 aaKnown RBP12.94□□□□□ -0.34
SEH1L-208ENST00000590843 CCP110O43303 1012 aa12.94□□□□□ -0.34
SEH1L-208ENST00000590843 RSBN1LQ6PCB5 846 aaPredicted RBP12.94□□□□□ -0.34
SEH1L-208ENST00000590843 RNF180Q86T96 592 aa12.94□□□□□ -0.34
SEH1L-208ENST00000590843 GREM2Q9H772 168 aa12.94□□□□□ -0.34
SEH1L-208ENST00000590843 GPR108Q9NPR9 543 aa12.94□□□□□ -0.34
SEH1L-208ENST00000590843 SPATA31E1Q6ZUB1 1445 aa12.93□□□□□ -0.34
SEH1L-208ENST00000590843 DCDC2CA8MYV0 355 aa12.93□□□□□ -0.34
SEH1L-208ENST00000590843 ABCD1P33897 745 aa12.93□□□□□ -0.34
SEH1L-208ENST00000590843 PKD2L1Q9P0L9 805 aa12.93□□□□□ -0.34
SEH1L-208ENST00000590843 SASH1O94885 1247 aa12.93□□□□□ -0.34
SEH1L-208ENST00000590843 TRPC3Q13507 836 aa12.93□□□□□ -0.34
SEH1L-208ENST00000590843 MAP3K11Q16584 847 aa12.93□□□□□ -0.34
SEH1L-208ENST00000590843 PRR5LQ6MZQ0 368 aa12.93□□□□□ -0.34
SEH1L-208ENST00000590843 C1orf228Q6PIY5 440 aa12.93□□□□□ -0.34
SEH1L-208ENST00000590843 COL23A1Q86Y22 540 aaPredicted RBP12.93□□□□□ -0.34
SEH1L-208ENST00000590843 CCDC144CPQ8IYA2 1237 aa12.93□□□□□ -0.34
SEH1L-208ENST00000590843 MKRN1Q9UHC7 482 aaKnown RBP12.93□□□□□ -0.34
SEH1L-208ENST00000590843 TMEM232C9JQI7 657 aa12.93□□□□□ -0.34
SEH1L-208ENST00000590843 GCLCP48506 637 aaPredicted RBP12.93□□□□□ -0.34
SEH1L-208ENST00000590843 UPF1Q92900 1129 aaKnown RBP eCLIP12.93□□□□□ -0.34
SEH1L-208ENST00000590843 SUCLG2Q96I99 432 aa12.93□□□□□ -0.34
SEH1L-208ENST00000590843 ELP3Q9H9T3 547 aa12.93□□□□□ -0.34
SEH1L-208ENST00000590843 COMMD10Q9Y6G5 202 aa12.93□□□□□ -0.34
SEH1L-208ENST00000590843 TECPR2O15040 1411 aa12.93□□□□□ -0.34
SEH1L-208ENST00000590843 USH1GQ495M9 461 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 SLC9C1Q4G0N8 1177 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 CCDC102BQ68D86 513 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 RGS22Q8NE09 1264 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 TBC1D5Q92609 795 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 SMTNL1A8MU46 457 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 CACNA2D4Q7Z3S7 1137 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 MB21D1Q8N884 522 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 USP19O94966 1318 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 USP42Q9H9J4 1324 aaKnown RBP12.92□□□□□ -0.34
SEH1L-208ENST00000590843 KDM5AP29375 1690 aaKnown RBP12.92□□□□□ -0.34
SEH1L-208ENST00000590843 RGS2P41220 211 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 POTEAQ6S8J7 498 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 GPC2Q8N158 579 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 NOX5Q96PH1 765 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 MMP19Q99542 508 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 PHLPP2Q6ZVD8 1323 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 TTLL1O95922 423 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 YWHAEP62258 255 aaKnown RBP12.92□□□□□ -0.34
SEH1L-208ENST00000590843 ZRSR2Q15696 482 aaKnown RBP12.92□□□□□ -0.34
SEH1L-208ENST00000590843 NUDT18Q6ZVK8 323 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 DEPTORQ8TB45 409 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 KATNAL1Q9BW62 490 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 PCDHA1Q9Y5I3 950 aa12.92□□□□□ -0.34
SEH1L-208ENST00000590843 PATL2C9JE40 543 aaKnown RBP12.91□□□□□ -0.34
SEH1L-208ENST00000590843 BMP3P12645 472 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 RPL13P26373 211 aaKnown RBP12.91□□□□□ -0.34
SEH1L-208ENST00000590843 SCARF1Q14162 830 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 UTP14CQ5TAP6 766 aaKnown RBP12.91□□□□□ -0.34
SEH1L-208ENST00000590843 ATP6V0A1Q93050 837 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 AMNQ9BXJ7 453 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 LIMCH1Q9UPQ0 1083 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 MST1RQ04912 1400 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 TMEM88BA6NKF7 163 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 M0R2C6 588 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 RGL2O15211 777 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 PPP2R5AQ15172 486 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 ASPRV1Q53RT3 343 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 HS1BP3Q53T59 392 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 ANGEL2Q5VTE6 544 aaKnown RBP12.91□□□□□ -0.34
SEH1L-208ENST00000590843 METTL23Q86XA0 190 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 KCNV1Q6PIU1 500 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 MIER3Q7Z3K6 550 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 ZNF532Q9HCE3 1301 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 TYW5A2RUC4 315 aaKnown RBP12.91□□□□□ -0.34
SEH1L-208ENST00000590843 RARBP10826 455 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 TTC12Q9H892 705 aaPredicted RBP12.91□□□□□ -0.34
SEH1L-208ENST00000590843 CD209Q9NNX6 404 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 CDHR2Q9BYE9 1310 aa12.91□□□□□ -0.34
SEH1L-208ENST00000590843 CCDC169A6NNP5 214 aa12.9□□□□□ -0.34
SEH1L-208ENST00000590843 GPAA1O43292 621 aa12.9□□□□□ -0.34
SEH1L-208ENST00000590843 STAT2P52630 851 aa12.9□□□□□ -0.34
SEH1L-208ENST00000590843 NACC1Q96RE7 527 aa12.9□□□□□ -0.34
SEH1L-208ENST00000590843 ALG1Q9BT22 464 aa12.9□□□□□ -0.34
SEH1L-208ENST00000590843 CIZ1Q9ULV3 898 aaPredicted RBP12.9□□□□□ -0.34
SEH1L-208ENST00000590843 CTCFP49711 727 aaPredicted RBP12.9□□□□□ -0.34
SEH1L-208ENST00000590843 FKBP1BP68106 108 aa12.9□□□□□ -0.34
SEH1L-208ENST00000590843 WDR44Q5JSH3 913 aa12.9□□□□□ -0.34
SEH1L-208ENST00000590843 URGCPQ8TCY9 931 aa12.9□□□□□ -0.34
SEH1L-208ENST00000590843 SCAND2PQ9GZW5 306 aaPredicted RBP12.9□□□□□ -0.34
SEH1L-208ENST00000590843 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.9□□□□□ -0.34
SEH1L-208ENST00000590843 UQCRHP07919 91 aa12.9□□□□□ -0.34
SEH1L-208ENST00000590843 ACTN2P35609 894 aa12.9□□□□□ -0.34
SEH1L-208ENST00000590843 TTLL4Q14679 1199 aa12.9□□□□□ -0.34
SEH1L-208ENST00000590843 MIS18BP1Q6P0N0 1132 aa12.9□□□□□ -0.34
SEH1L-208ENST00000590843 C7orf31Q8N865 590 aa12.9□□□□□ -0.34
SEH1L-208ENST00000590843 PODXL2Q9NZ53 605 aa12.9□□□□□ -0.34
SEH1L-208ENST00000590843 FKTNO75072 461 aa12.9□□□□□ -0.34
SEH1L-208ENST00000590843 SERPINC1P01008 464 aa12.9□□□□□ -0.34
SEH1L-208ENST00000590843 GAS7O60861 476 aa12.89□□□□□ -0.35
SEH1L-208ENST00000590843 CTNNA2P26232 953 aa12.89□□□□□ -0.35
SEH1L-208ENST00000590843 PDE4AP27815 886 aa12.89□□□□□ -0.35
SEH1L-208ENST00000590843 MIGA2Q7L4E1 593 aa12.89□□□□□ -0.35
SEH1L-208ENST00000590843 TNS4Q8IZW8 715 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms