RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 TMEM87AQ8NBN3 555 aa11.06□□□□□ -0.64
VPS25-205ENST00000590339 MTMR14Q8NCE2 650 aa11.06□□□□□ -0.64
VPS25-205ENST00000590339 NSUN7Q8NE18 718 aaKnown RBP11.06□□□□□ -0.64
VPS25-205ENST00000590339 NKX2-3Q8TAU0 364 aa11.06□□□□□ -0.64
VPS25-205ENST00000590339 WDR66Q8TBY9 1149 aa11.06□□□□□ -0.64
VPS25-205ENST00000590339 NACAP1Q9BZK3 213 aa11.06□□□□□ -0.64
VPS25-205ENST00000590339 ANGEL1Q9UNK9 670 aaKnown RBP11.06□□□□□ -0.64
VPS25-205ENST00000590339 SLC4A4Q9Y6R1 1079 aa11.06□□□□□ -0.64
VPS25-205ENST00000590339 SH2B2O14492 632 aaPredicted RBP11.05□□□□□ -0.64
VPS25-205ENST00000590339 CTDNEP1O95476 244 aa11.05□□□□□ -0.64
VPS25-205ENST00000590339 APPP05067 770 aa11.05□□□□□ -0.64
VPS25-205ENST00000590339 SLC10A3P09131 477 aa11.05□□□□□ -0.64
VPS25-205ENST00000590339 PDCP20941 246 aa11.05□□□□□ -0.64
VPS25-205ENST00000590339 PDIA3P30101 505 aaKnown RBP11.05□□□□□ -0.64
VPS25-205ENST00000590339 DEKP35659 375 aaKnown RBP11.05□□□□□ -0.64
VPS25-205ENST00000590339 CRKP46108 304 aa11.05□□□□□ -0.64
VPS25-205ENST00000590339 STK3Q13188 491 aa11.05□□□□□ -0.64
VPS25-205ENST00000590339 RASA3Q14644 834 aa11.05□□□□□ -0.64
VPS25-205ENST00000590339 KLHL40Q2TBA0 621 aa11.05□□□□□ -0.64
VPS25-205ENST00000590339 AKNAD1Q5T1N1 836 aa11.05□□□□□ -0.64
VPS25-205ENST00000590339 SPTY2D1Q68D10 685 aaPredicted RBP11.05□□□□□ -0.64
VPS25-205ENST00000590339 MCTP1Q6DN14 999 aa11.05□□□□□ -0.64
VPS25-205ENST00000590339 CYB5R4Q7L1T6 521 aa11.05□□□□□ -0.64
VPS25-205ENST00000590339 ARMC9Q7Z3E5 817 aa11.05□□□□□ -0.64
VPS25-205ENST00000590339 CSRNP1Q96S65 589 aa11.05□□□□□ -0.64
VPS25-205ENST00000590339 MTA3Q9BTC8 594 aa11.05□□□□□ -0.64
VPS25-205ENST00000590339 GPHNQ9NQX3 736 aaPredicted RBP11.05□□□□□ -0.64
VPS25-205ENST00000590339 ZNF70Q9UC06 446 aaPredicted RBP11.05□□□□□ -0.64
VPS25-205ENST00000590339 PSME4Q14997 1843 aa11.05□□□□□ -0.64
VPS25-205ENST00000590339 TCP10L2B9ZVM9 353 aa11.04□□□□□ -0.64
VPS25-205ENST00000590339 JAK2O60674 1132 aa11.04□□□□□ -0.64
VPS25-205ENST00000590339 TRPA1O75762 1119 aa11.04□□□□□ -0.64
VPS25-205ENST00000590339 TDO2P48775 406 aa11.04□□□□□ -0.64
VPS25-205ENST00000590339 DYNLL1P63167 89 aaKnown RBP11.04□□□□□ -0.64
VPS25-205ENST00000590339 HMGN5P82970 282 aaKnown RBP11.04□□□□□ -0.64
VPS25-205ENST00000590339 FGD1P98174 961 aa11.04□□□□□ -0.64
VPS25-205ENST00000590339 TRDNQ13061 729 aa11.04□□□□□ -0.64
VPS25-205ENST00000590339 NBPF12Q5TAG4 269 aaPredicted RBP11.04□□□□□ -0.64
VPS25-205ENST00000590339 RASAL3Q86YV0 1011 aa11.04□□□□□ -0.64
VPS25-205ENST00000590339 TBC1D22AQ8WUA7 517 aa11.04□□□□□ -0.64
VPS25-205ENST00000590339 CHMP4CQ96CF2 233 aa11.04□□□□□ -0.64
VPS25-205ENST00000590339 CHAMP1Q96JM3 812 aa11.04□□□□□ -0.64
VPS25-205ENST00000590339 TMEM87BQ96K49 555 aa11.04□□□□□ -0.64
VPS25-205ENST00000590339 CNNM2Q9H8M5 875 aa11.04□□□□□ -0.64
VPS25-205ENST00000590339 SERPINA10Q9UK55 444 aa11.04□□□□□ -0.64
VPS25-205ENST00000590339 HPS5Q9UPZ3 1129 aa11.04□□□□□ -0.64
VPS25-205ENST00000590339 PCNTO95613 3336 aa11.04□□□□□ -0.64
VPS25-205ENST00000590339 ROBO3Q96MS0 1386 aa11.03□□□□□ -0.64
VPS25-205ENST00000590339 PTPDC1A2A3K4 754 aa11.03□□□□□ -0.64
VPS25-205ENST00000590339 B4E1Z4 1266 aa11.03□□□□□ -0.64
VPS25-205ENST00000590339 FGRP09769 529 aa11.03□□□□□ -0.64
VPS25-205ENST00000590339 CACNB3P54284 484 aa11.03□□□□□ -0.64
VPS25-205ENST00000590339 CTDSPL2Q05D32 466 aa11.03□□□□□ -0.64
VPS25-205ENST00000590339 PPARAQ07869 468 aa11.03□□□□□ -0.64
VPS25-205ENST00000590339 SUPT20HL1Q3ZLR7 823 aa11.03□□□□□ -0.64
VPS25-205ENST00000590339 FOXD4L5Q5VV16 416 aaPredicted RBP11.03□□□□□ -0.64
VPS25-205ENST00000590339 CHST3Q7LGC8 479 aa11.03□□□□□ -0.64
VPS25-205ENST00000590339 SGMS1Q86VZ5 419 aa11.03□□□□□ -0.64
VPS25-205ENST00000590339 SDR42E1Q8WUS8 393 aa11.03□□□□□ -0.64
VPS25-205ENST00000590339 FOXD4L4Q8WXT5 416 aaPredicted RBP11.03□□□□□ -0.64
VPS25-205ENST00000590339 KRT23Q9C075 422 aa11.03□□□□□ -0.64
VPS25-205ENST00000590339 RNF186Q9NXI6 227 aa11.03□□□□□ -0.64
VPS25-205ENST00000590339 BRPF3Q9ULD4 1205 aa11.03□□□□□ -0.64
VPS25-205ENST00000590339 KLF18A0A0U1RQI7 1052 aa11.02□□□□□ -0.65
VPS25-205ENST00000590339 GOLGA8BA8MQT2 603 aa11.02□□□□□ -0.65
VPS25-205ENST00000590339 CA12O43570 354 aa11.02□□□□□ -0.65
VPS25-205ENST00000590339 PPP1R12BO60237 982 aaPredicted RBP11.02□□□□□ -0.65
VPS25-205ENST00000590339 LDHBP07195 334 aaKnown RBP11.02□□□□□ -0.65
VPS25-205ENST00000590339 PCP11498 1178 aaKnown RBP11.02□□□□□ -0.65
VPS25-205ENST00000590339 LIFRP42702 1097 aa11.02□□□□□ -0.65
VPS25-205ENST00000590339 SPDYE2Q495Y8 402 aa11.02□□□□□ -0.65
VPS25-205ENST00000590339 LARP1BQ659C4 914 aaKnown RBP11.02□□□□□ -0.65
VPS25-205ENST00000590339 DZIP1Q86YF9 867 aaKnown RBP11.02□□□□□ -0.65
VPS25-205ENST00000590339 IGDCC4Q8TDY8 1250 aa11.02□□□□□ -0.65
VPS25-205ENST00000590339 TEKT1Q969V4 418 aa11.02□□□□□ -0.65
VPS25-205ENST00000590339 SLC10A4Q96EP9 437 aa11.02□□□□□ -0.65
VPS25-205ENST00000590339 CRNKL1Q9BZJ0 848 aaKnown RBP11.02□□□□□ -0.65
VPS25-205ENST00000590339 RNF41Q9H4P4 317 aaPredicted RBP11.02□□□□□ -0.65
VPS25-205ENST00000590339 LY9Q9HBG7 655 aa11.02□□□□□ -0.65
VPS25-205ENST00000590339 ATP8A2Q9NTI2 1148 aa11.02□□□□□ -0.65
VPS25-205ENST00000590339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.02□□□□□ -0.65
VPS25-205ENST00000590339 ATP6V1DQ9Y5K8 247 aa11.02□□□□□ -0.65
VPS25-205ENST00000590339 MROH7-TTC4A0A0A0MT08 1334 aa11.02□□□□□ -0.65
VPS25-205ENST00000590339 TRPM7Q96QT4 1865 aa11.02□□□□□ -0.65
VPS25-205ENST00000590339 POLR2AP24928 1970 aaKnown RBP11.01□□□□□ -0.65
VPS25-205ENST00000590339 VPS37CA5D8V6 355 aaPredicted RBP11.01□□□□□ -0.65
VPS25-205ENST00000590339 DTNBO60941 627 aa11.01□□□□□ -0.65
VPS25-205ENST00000590339 USP2O75604 605 aaPredicted RBP11.01□□□□□ -0.65
VPS25-205ENST00000590339 RCAN1P53805 252 aa11.01□□□□□ -0.65
VPS25-205ENST00000590339 PPP4CP60510 307 aa11.01□□□□□ -0.65
VPS25-205ENST00000590339 GSTO1P78417 241 aa11.01□□□□□ -0.65
VPS25-205ENST00000590339 RESTQ13127 1097 aa11.01□□□□□ -0.65
VPS25-205ENST00000590339 SBK1Q52WX2 424 aa11.01□□□□□ -0.65
VPS25-205ENST00000590339 APOA5Q6Q788 366 aa11.01□□□□□ -0.65
VPS25-205ENST00000590339 MFSD6Q6ZSS7 791 aa11.01□□□□□ -0.65
VPS25-205ENST00000590339 CERS3Q8IU89 383 aa11.01□□□□□ -0.65
VPS25-205ENST00000590339 CDAN1Q8IWY9 1227 aa11.01□□□□□ -0.65
VPS25-205ENST00000590339 RGS22Q8NE09 1264 aa11.01□□□□□ -0.65
VPS25-205ENST00000590339 TMEM39BQ9GZU3 492 aa11.01□□□□□ -0.65
VPS25-205ENST00000590339 NCOA5Q9HCD5 579 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms