RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 POLR3DP05423 398 aaPredicted RBP12.02□□□□□ -0.49
VPS25-203ENST00000589520 BTDP43251 543 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 ME1P48163 572 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 GUCY1B3Q02153 619 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 FAM160A1Q05DH4 1040 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 TROAPQ12815 778 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 SLC39A14Q15043 492 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 RILPL1Q5EBL4 403 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 SASS6Q6UVJ0 657 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 DPP8Q6V1X1 898 aaPredicted RBP12.02□□□□□ -0.49
VPS25-203ENST00000589520 NBPF11Q86T75 865 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 NKX2-3Q8TAU0 364 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 MRPS27Q92552 414 aaKnown RBP12.02□□□□□ -0.49
VPS25-203ENST00000589520 PDLIM2Q96JY6 352 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 LZTS2Q9BRK4 669 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 ZKSCAN3Q9BRR0 538 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.02□□□□□ -0.49
VPS25-203ENST00000589520 MKNK2Q9HBH9 465 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 BRMS1Q9HCU9 246 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.02□□□□□ -0.49
VPS25-203ENST00000589520 STK32BQ9NY57 414 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 CEP131Q9UPN4 1083 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 NRXN2Q9P2S2 1712 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 RGPD3A6NKT7 1758 aaPredicted RBP12.02□□□□□ -0.49
VPS25-203ENST00000589520 RGPD4Q7Z3J3 1758 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 CCDC88AQ3V6T2 1871 aa12.02□□□□□ -0.49
VPS25-203ENST00000589520 TCHHQ07283 1943 aa12.01□□□□□ -0.49
VPS25-203ENST00000589520 G3V3G9 751 aa12.01□□□□□ -0.49
VPS25-203ENST00000589520 KINO60870 393 aaKnown RBP12.01□□□□□ -0.49
VPS25-203ENST00000589520 BMP15O95972 392 aa12.01□□□□□ -0.49
VPS25-203ENST00000589520 MMP1P03956 469 aa12.01□□□□□ -0.49
VPS25-203ENST00000589520 LIG1P18858 919 aa12.01□□□□□ -0.49
VPS25-203ENST00000589520 RXRAP19793 462 aa12.01□□□□□ -0.49
VPS25-203ENST00000589520 CMA1P23946 247 aa12.01□□□□□ -0.49
VPS25-203ENST00000589520 SLC15A2Q16348 729 aa12.01□□□□□ -0.49
VPS25-203ENST00000589520 PPP4R3BQ5MIZ7 849 aa12.01□□□□□ -0.49
VPS25-203ENST00000589520 DCAF8Q5TAQ9 597 aa12.01□□□□□ -0.49
VPS25-203ENST00000589520 SH3RF3Q8TEJ3 882 aaPredicted RBP12.01□□□□□ -0.49
VPS25-203ENST00000589520 PHKBQ93100 1093 aa12.01□□□□□ -0.49
VPS25-203ENST00000589520 PCDHA7Q9UN72 937 aa12.01□□□□□ -0.49
VPS25-203ENST00000589520 MYH13Q9UKX3 1938 aa12□□□□□ -0.49
VPS25-203ENST00000589520 SMARCA1P28370 1054 aa12□□□□□ -0.49
VPS25-203ENST00000589520 FOSBP53539 338 aa12□□□□□ -0.49
VPS25-203ENST00000589520 HDLBPQ00341 1268 aaKnown RBP12□□□□□ -0.49
VPS25-203ENST00000589520 CEBPZQ03701 1054 aaKnown RBP12□□□□□ -0.49
VPS25-203ENST00000589520 EZH2Q15910 746 aaKnown RBP12□□□□□ -0.49
VPS25-203ENST00000589520 OTUD7BQ6GQQ9 843 aa12□□□□□ -0.49
VPS25-203ENST00000589520 HHIPL2Q6UWX4 724 aa12□□□□□ -0.49
VPS25-203ENST00000589520 RAB11FIP4Q86YS3 637 aa12□□□□□ -0.49
VPS25-203ENST00000589520 NOSTRINQ8IVI9 506 aa12□□□□□ -0.49
VPS25-203ENST00000589520 CCDC144CPQ8IYA2 1237 aa12□□□□□ -0.49
VPS25-203ENST00000589520 ELOA2Q8IYF1 753 aaPredicted RBP12□□□□□ -0.49
VPS25-203ENST00000589520 TEX11Q8IYF3 940 aa12□□□□□ -0.49
VPS25-203ENST00000589520 SUPT20HQ8NEM7 779 aa12□□□□□ -0.49
VPS25-203ENST00000589520 ENGASEQ8NFI3 743 aa12□□□□□ -0.49
VPS25-203ENST00000589520 TGFBRAP1Q8WUH2 860 aa12□□□□□ -0.49
VPS25-203ENST00000589520 TIGD1Q96MW7 591 aa12□□□□□ -0.49
VPS25-203ENST00000589520 MYL10Q9BUA6 226 aa12□□□□□ -0.49
VPS25-203ENST00000589520 KAT14Q9H8E8 782 aa12□□□□□ -0.49
VPS25-203ENST00000589520 LRRC37AA6NMS7 1700 aa12□□□□□ -0.49
VPS25-203ENST00000589520 CYP2D7A0A087X1C5 515 aa11.99□□□□□ -0.49
VPS25-203ENST00000589520 FAM237AA0A1B0GTK4 181 aa11.99□□□□□ -0.49
VPS25-203ENST00000589520 NR1I2O75469 434 aa11.99□□□□□ -0.49
VPS25-203ENST00000589520 USP17L8P0C7I0 530 aa11.99□□□□□ -0.49
VPS25-203ENST00000589520 TSPY3P0CV98 308 aa11.99□□□□□ -0.49
VPS25-203ENST00000589520 TSPY8P0CW00 308 aa11.99□□□□□ -0.49
VPS25-203ENST00000589520 GTF2IP78347 998 aa11.99□□□□□ -0.49
VPS25-203ENST00000589520 TFAP4Q01664 338 aa11.99□□□□□ -0.49
VPS25-203ENST00000589520 DIXDC1Q155Q3 683 aa11.99□□□□□ -0.49
VPS25-203ENST00000589520 C16orf86Q6ZW13 317 aa11.99□□□□□ -0.49
VPS25-203ENST00000589520 TMTC3Q6ZXV5 915 aa11.99□□□□□ -0.49
VPS25-203ENST00000589520 C2CD5Q86YS7 1000 aa11.99□□□□□ -0.49
VPS25-203ENST00000589520 FSIP1Q8NA03 581 aa11.99□□□□□ -0.49
VPS25-203ENST00000589520 FAM200AQ8TCP9 573 aa11.99□□□□□ -0.49
VPS25-203ENST00000589520 CAMKK2Q96RR4 588 aa11.99□□□□□ -0.49
VPS25-203ENST00000589520 SH3GLB2Q9NR46 395 aa11.99□□□□□ -0.49
VPS25-203ENST00000589520 JAG2Q9Y219 1238 aa11.99□□□□□ -0.49
VPS25-203ENST00000589520 MYO3BQ8WXR4 1341 aa11.98□□□□□ -0.49
VPS25-203ENST00000589520 KIF28PB7ZC32 967 aa11.98□□□□□ -0.49
VPS25-203ENST00000589520 CUTAO60888 179 aa11.98□□□□□ -0.49
VPS25-203ENST00000589520 PRDM1O75626 825 aa11.98□□□□□ -0.49
VPS25-203ENST00000589520 RHBDL3P58872 404 aa11.98□□□□□ -0.49
VPS25-203ENST00000589520 FUT2Q10981 343 aa11.98□□□□□ -0.49
VPS25-203ENST00000589520 SNW1Q13573 536 aaKnown RBP11.98□□□□□ -0.49
VPS25-203ENST00000589520 GALNT17Q6IS24 598 aa11.98□□□□□ -0.49
VPS25-203ENST00000589520 DIS3L2Q8IYB7 885 aaKnown RBP11.98□□□□□ -0.49
VPS25-203ENST00000589520 STK11IPQ8N1F8 1099 aa11.98□□□□□ -0.49
VPS25-203ENST00000589520 NEDD1Q8NHV4 660 aa11.98□□□□□ -0.49
VPS25-203ENST00000589520 ZNF622Q969S3 477 aaKnown RBP eCLIP11.98□□□□□ -0.49
VPS25-203ENST00000589520 SWAP70Q9UH65 585 aa11.98□□□□□ -0.49
VPS25-203ENST00000589520 CLIC4Q9Y696 253 aa11.98□□□□□ -0.49
VPS25-203ENST00000589520 PPFIA3O75145 1194 aa11.97□□□□□ -0.49
VPS25-203ENST00000589520 NPM3O75607 178 aaKnown RBP11.97□□□□□ -0.49
VPS25-203ENST00000589520 TPM3P06753 285 aa11.97□□□□□ -0.49
VPS25-203ENST00000589520 CYP2D6P10635 497 aa11.97□□□□□ -0.49
VPS25-203ENST00000589520 CALML3P27482 149 aa11.97□□□□□ -0.49
VPS25-203ENST00000589520 KRT2P35908 639 aa11.97□□□□□ -0.49
VPS25-203ENST00000589520 TRAPPC10P48553 1259 aa11.97□□□□□ -0.49
VPS25-203ENST00000589520 CDK8P49336 464 aa11.97□□□□□ -0.49
VPS25-203ENST00000589520 TYRO3Q06418 890 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms