RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ASNSP08243 561 aa16.74■□□□□ 0.27
HDAC5-208ENST00000588419 USP5P45974 858 aa16.74■□□□□ 0.27
HDAC5-208ENST00000588419 IRF5Q13568 498 aa16.74■□□□□ 0.27
HDAC5-208ENST00000588419 MAGEB6Q8N7X4 407 aa16.74■□□□□ 0.27
HDAC5-208ENST00000588419 PXYLP1Q8TE99 480 aa16.74■□□□□ 0.27
HDAC5-208ENST00000588419 EXOC6BQ9Y2D4 811 aa16.74■□□□□ 0.27
HDAC5-208ENST00000588419 FRMPD3Q5JV73 1810 aa16.73■□□□□ 0.27
HDAC5-208ENST00000588419 MYH7P12883 1935 aa16.73■□□□□ 0.27
HDAC5-208ENST00000588419 PEX10O60683 326 aa16.73■□□□□ 0.27
HDAC5-208ENST00000588419 JAG1P78504 1218 aa16.73■□□□□ 0.27
HDAC5-208ENST00000588419 ZYXQ15942 572 aaKnown RBP16.73■□□□□ 0.27
HDAC5-208ENST00000588419 AACSQ86V21 672 aa16.73■□□□□ 0.27
HDAC5-208ENST00000588419 MIER1Q8N108 512 aa16.73■□□□□ 0.27
HDAC5-208ENST00000588419 EAF2Q96CJ1 260 aaPredicted RBP16.73■□□□□ 0.27
HDAC5-208ENST00000588419 ZBTB21Q9ULJ3 1066 aa16.73■□□□□ 0.27
HDAC5-208ENST00000588419 TRIOBPQ9H2D6 2365 aa16.72■□□□□ 0.27
HDAC5-208ENST00000588419 APBB1O00213 710 aa16.72■□□□□ 0.27
HDAC5-208ENST00000588419 BACE1P56817 501 aa16.72■□□□□ 0.27
HDAC5-208ENST00000588419 PPP4CP60510 307 aa16.72■□□□□ 0.27
HDAC5-208ENST00000588419 SH3D19Q5HYK7 790 aa16.72■□□□□ 0.27
HDAC5-208ENST00000588419 CEP85Q6P2H3 762 aa16.72■□□□□ 0.27
HDAC5-208ENST00000588419 FEZ1Q99689 392 aa16.72■□□□□ 0.27
HDAC5-208ENST00000588419 PAGR1Q9BTK6 254 aa16.72■□□□□ 0.27
HDAC5-208ENST00000588419 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.72■□□□□ 0.27
HDAC5-208ENST00000588419 BAZ2AQ9UIF9 1905 aaKnown RBP16.72■□□□□ 0.27
HDAC5-208ENST00000588419 USP17L10C9JJH3 530 aa16.71■□□□□ 0.27
HDAC5-208ENST00000588419 ZBTB7BO15156 539 aaPredicted RBP16.71■□□□□ 0.27
HDAC5-208ENST00000588419 HMGCRP04035 888 aa16.71■□□□□ 0.27
HDAC5-208ENST00000588419 TRIM32Q13049 653 aa16.71■□□□□ 0.27
HDAC5-208ENST00000588419 UBE2Q1Q7Z7E8 422 aa16.71■□□□□ 0.27
HDAC5-208ENST00000588419 FOXP4Q8IVH2 680 aaPredicted RBP16.71■□□□□ 0.27
HDAC5-208ENST00000588419 CCAR1Q8IX12 1150 aaKnown RBP16.71■□□□□ 0.27
HDAC5-208ENST00000588419 PANK1Q8TE04 598 aa16.71■□□□□ 0.27
HDAC5-208ENST00000588419 ZNF512BQ96KM6 892 aaPredicted RBP16.71■□□□□ 0.27
HDAC5-208ENST00000588419 WDR18Q9BV38 432 aa16.71■□□□□ 0.27
HDAC5-208ENST00000588419 ANTXR1Q9H6X2 564 aa16.71■□□□□ 0.27
HDAC5-208ENST00000588419 CWC22Q9HCG8 908 aaKnown RBP16.71■□□□□ 0.27
HDAC5-208ENST00000588419 IL1RAPL2Q9NP60 686 aa16.71■□□□□ 0.27
HDAC5-208ENST00000588419 NOP58Q9Y2X3 529 aaKnown RBP16.71■□□□□ 0.27
HDAC5-208ENST00000588419 EVI5O60447 810 aa16.7■□□□□ 0.26
HDAC5-208ENST00000588419 GH2P01242 217 aa16.7■□□□□ 0.26
HDAC5-208ENST00000588419 CYP2B6P20813 491 aa16.7■□□□□ 0.26
HDAC5-208ENST00000588419 HERVK_113P62684 666 aa16.7■□□□□ 0.26
HDAC5-208ENST00000588419 DIS3LQ8TF46 1054 aaKnown RBP16.7■□□□□ 0.26
HDAC5-208ENST00000588419 P2RX7Q99572 595 aaKnown RBP16.7■□□□□ 0.26
HDAC5-208ENST00000588419 PAK6Q9NQU5 681 aaPredicted RBP16.7■□□□□ 0.26
HDAC5-208ENST00000588419 RBM27Q9P2N5 1060 aaKnown RBP16.7■□□□□ 0.26
HDAC5-208ENST00000588419 NR2E3Q9Y5X4 410 aa16.7■□□□□ 0.26
HDAC5-208ENST00000588419 MAP3K12Q12852 859 aa16.69■□□□□ 0.26
HDAC5-208ENST00000588419 RAB3GAP1Q15042 981 aa16.69■□□□□ 0.26
HDAC5-208ENST00000588419 ERC1Q8IUD2 1116 aa16.69■□□□□ 0.26
HDAC5-208ENST00000588419 PAWRQ96IZ0 340 aaKnown RBP16.69■□□□□ 0.26
HDAC5-208ENST00000588419 TXNRD2Q9NNW7 524 aa16.69■□□□□ 0.26
HDAC5-208ENST00000588419 C19orf81C9J6K1 198 aa16.68■□□□□ 0.26
HDAC5-208ENST00000588419 PDE3AQ14432 1141 aa16.68■□□□□ 0.26
HDAC5-208ENST00000588419 GPRC5AQ8NFJ5 357 aa16.68■□□□□ 0.26
HDAC5-208ENST00000588419 TRIB2Q92519 343 aa16.68■□□□□ 0.26
HDAC5-208ENST00000588419 HMX1Q9NP08 348 aaPredicted RBP16.68■□□□□ 0.26
HDAC5-208ENST00000588419 MORF4L1Q9UBU8 362 aa16.68■□□□□ 0.26
HDAC5-208ENST00000588419 WDR78Q5VTH9 848 aa16.67■□□□□ 0.26
HDAC5-208ENST00000588419 DIEXFQ68CQ4 756 aaKnown RBP16.67■□□□□ 0.26
HDAC5-208ENST00000588419 USP17L2Q6R6M4 530 aa16.67■□□□□ 0.26
HDAC5-208ENST00000588419 DNAJC2Q99543 621 aaKnown RBP16.67■□□□□ 0.26
HDAC5-208ENST00000588419 NUDT12Q9BQG2 462 aa16.67■□□□□ 0.26
HDAC5-208ENST00000588419 POLR3DP05423 398 aaPredicted RBP16.66■□□□□ 0.26
HDAC5-208ENST00000588419 HOXA7P31268 230 aaPredicted RBP16.66■□□□□ 0.26
HDAC5-208ENST00000588419 ERVK-9P63128 1117 aa16.66■□□□□ 0.26
HDAC5-208ENST00000588419 ERVK-24P63145 666 aa16.66■□□□□ 0.26
HDAC5-208ENST00000588419 NECAB2Q7Z6G3 386 aa16.66■□□□□ 0.26
HDAC5-208ENST00000588419 METTL16Q86W50 562 aaKnown RBP16.66■□□□□ 0.26
HDAC5-208ENST00000588419 C7orf61Q8IZ16 206 aa16.66■□□□□ 0.26
HDAC5-208ENST00000588419 SOCS4Q8WXH5 440 aa16.66■□□□□ 0.26
HDAC5-208ENST00000588419 EMILIN3Q9NT22 766 aa16.66■□□□□ 0.26
HDAC5-208ENST00000588419 GINM1Q9NU53 330 aa16.66■□□□□ 0.26
HDAC5-208ENST00000588419 SERPINB13Q9UIV8 391 aa16.66■□□□□ 0.26
HDAC5-208ENST00000588419 GJD2Q9UKL4 321 aa16.66■□□□□ 0.26
HDAC5-208ENST00000588419 ZBED9Q6R2W3 1325 aa16.66■□□□□ 0.26
HDAC5-208ENST00000588419 RPTORQ8N122 1335 aa16.66■□□□□ 0.26
HDAC5-208ENST00000588419 MAGEB6P1A0A0J9YX57 407 aa16.65■□□□□ 0.26
HDAC5-208ENST00000588419 PRKAR2AP13861 404 aaKnown RBP16.65■□□□□ 0.26
HDAC5-208ENST00000588419 ZKSCAN1P17029 563 aaPredicted RBP16.65■□□□□ 0.26
HDAC5-208ENST00000588419 ABCB5Q2M3G0 1257 aa16.65■□□□□ 0.26
HDAC5-208ENST00000588419 CERKLQ49MI3 558 aaPredicted RBP16.65■□□□□ 0.26
HDAC5-208ENST00000588419 TTC6Q86TZ1 520 aa16.65■□□□□ 0.26
HDAC5-208ENST00000588419 CERS3Q8IU89 383 aa16.65■□□□□ 0.26
HDAC5-208ENST00000588419 RHPN1Q8TCX5 695 aa16.65■□□□□ 0.26
HDAC5-208ENST00000588419 CRISPLD2Q9H0B8 497 aa16.65■□□□□ 0.26
HDAC5-208ENST00000588419 PORCNQ9H237 461 aa16.65■□□□□ 0.26
HDAC5-208ENST00000588419 CABP5Q9NP86 173 aa16.65■□□□□ 0.26
HDAC5-208ENST00000588419 GOLIM4O00461 696 aa16.64■□□□□ 0.25
HDAC5-208ENST00000588419 MPHOSPH10O00566 681 aaKnown RBP16.64■□□□□ 0.25
HDAC5-208ENST00000588419 IGSF3O75054 1194 aa16.64■□□□□ 0.25
HDAC5-208ENST00000588419 MAPK4P31152 587 aa16.64■□□□□ 0.25
HDAC5-208ENST00000588419 Q3C1V9 767 aa16.64■□□□□ 0.25
HDAC5-208ENST00000588419 HSP90AB4PQ58FF6 505 aa16.64■□□□□ 0.25
HDAC5-208ENST00000588419 GPR142Q7Z601 462 aa16.64■□□□□ 0.25
HDAC5-208ENST00000588419 RBPJLQ9UBG7 517 aa16.64■□□□□ 0.25
HDAC5-208ENST00000588419 IFIT2P09913 472 aaKnown RBP16.63■□□□□ 0.25
HDAC5-208ENST00000588419 TTF1Q15361 905 aaPredicted RBP16.63■□□□□ 0.25
HDAC5-208ENST00000588419 CCL14Q16627 93 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms