RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 KBTBD3Q8NAB2 608 aa17.07■□□□□ 0.32
CCDC43-203ENST00000588210 IDI2Q9BXS1 227 aa17.07■□□□□ 0.32
CCDC43-203ENST00000588210 U3KPZ7 1027 aaPredicted RBP17.07■□□□□ 0.32
CCDC43-203ENST00000588210 PLCG2P16885 1265 aa17.06■□□□□ 0.32
CCDC43-203ENST00000588210 RHBDL3P58872 404 aa17.06■□□□□ 0.32
CCDC43-203ENST00000588210 CST9Q5W186 159 aa17.06■□□□□ 0.32
CCDC43-203ENST00000588210 FERMT3Q86UX7 667 aa17.06■□□□□ 0.32
CCDC43-203ENST00000588210 GTF3C6Q969F1 213 aa17.06■□□□□ 0.32
CCDC43-203ENST00000588210 NUP62CLQ9H1M0 184 aa17.06■□□□□ 0.32
CCDC43-203ENST00000588210 ZNF408Q9H9D4 720 aa17.06■□□□□ 0.32
CCDC43-203ENST00000588210 AATFQ9NY61 560 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC43-203ENST00000588210 ADD2P35612 726 aa17.06■□□□□ 0.32
CCDC43-203ENST00000588210 MAP3K11Q16584 847 aa17.06■□□□□ 0.32
CCDC43-203ENST00000588210 CREBZFQ9NS37 354 aa17.06■□□□□ 0.32
CCDC43-203ENST00000588210 ZNF532Q9HCE3 1301 aa17.05■□□□□ 0.32
CCDC43-203ENST00000588210 TCRBV5S4A2TA0A5A2 114 aa17.05■□□□□ 0.32
CCDC43-203ENST00000588210 NF2P35240 595 aa17.05■□□□□ 0.32
CCDC43-203ENST00000588210 UBE3CQ15386 1083 aa17.05■□□□□ 0.32
CCDC43-203ENST00000588210 LRRFIP1Q32MZ4 808 aaKnown RBP17.05■□□□□ 0.32
CCDC43-203ENST00000588210 PRAMEF18Q5VWM3 479 aa17.05■□□□□ 0.32
CCDC43-203ENST00000588210 NEK1Q96PY6 1258 aa17.05■□□□□ 0.32
CCDC43-203ENST00000588210 CNTNAP1P78357 1384 aa17.05■□□□□ 0.32
CCDC43-203ENST00000588210 TPM3P06753 285 aa17.05■□□□□ 0.32
CCDC43-203ENST00000588210 LIG1P18858 919 aa17.05■□□□□ 0.32
CCDC43-203ENST00000588210 NFIAQ12857 509 aa17.05■□□□□ 0.32
CCDC43-203ENST00000588210 SUPT20HL1Q3ZLR7 823 aa17.05■□□□□ 0.32
CCDC43-203ENST00000588210 FAM200AQ8TCP9 573 aa17.05■□□□□ 0.32
CCDC43-203ENST00000588210 FAM151AQ8WW52 585 aa17.05■□□□□ 0.32
CCDC43-203ENST00000588210 MAP7D2Q96T17 732 aa17.05■□□□□ 0.32
CCDC43-203ENST00000588210 SPTLC3Q9NUV7 552 aa17.05■□□□□ 0.32
CCDC43-203ENST00000588210 ENTPD3O75355 529 aa17.04■□□□□ 0.32
CCDC43-203ENST00000588210 NPM3O75607 178 aaKnown RBP17.04■□□□□ 0.32
CCDC43-203ENST00000588210 WDHD1O75717 1129 aaPredicted RBP17.04■□□□□ 0.32
CCDC43-203ENST00000588210 FAM173BQ6P4H8 233 aa17.04■□□□□ 0.32
CCDC43-203ENST00000588210 RBM43Q6ZSC3 357 aaKnown RBP17.04■□□□□ 0.32
CCDC43-203ENST00000588210 SPATA32Q96LK8 384 aa17.04■□□□□ 0.32
CCDC43-203ENST00000588210 TMEM39BQ9GZU3 492 aa17.04■□□□□ 0.32
CCDC43-203ENST00000588210 TTC12Q9H892 705 aaPredicted RBP17.04■□□□□ 0.32
CCDC43-203ENST00000588210 DDX19AQ9NUU7 478 aaKnown RBP17.04■□□□□ 0.32
CCDC43-203ENST00000588210 FAM198AQ9UFP1 575 aa17.04■□□□□ 0.32
CCDC43-203ENST00000588210 AP5Z1O43299 807 aa17.03■□□□□ 0.32
CCDC43-203ENST00000588210 ZFYP08048 801 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-203ENST00000588210 NOLC1Q14978 699 aaKnown RBP eCLIP17.03■□□□□ 0.32
CCDC43-203ENST00000588210 MCMDC2Q4G0Z9 681 aa17.03■□□□□ 0.32
CCDC43-203ENST00000588210 TICAM2Q86XR7 235 aa17.03■□□□□ 0.32
CCDC43-203ENST00000588210 MIGA1Q8NAN2 632 aa17.03■□□□□ 0.32
CCDC43-203ENST00000588210 SH3RF3Q8TEJ3 882 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-203ENST00000588210 LEO1Q8WVC0 666 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-203ENST00000588210 ZNF830Q96NB3 372 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-203ENST00000588210 MYH7P12883 1935 aa17.03■□□□□ 0.32
CCDC43-203ENST00000588210 FKBP1BP68106 108 aa17.03■□□□□ 0.32
CCDC43-203ENST00000588210 TYRO3Q06418 890 aa17.03■□□□□ 0.32
CCDC43-203ENST00000588210 TCP10Q12799 353 aa17.03■□□□□ 0.32
CCDC43-203ENST00000588210 TEX11Q8IYF3 940 aa17.03■□□□□ 0.32
CCDC43-203ENST00000588210 C2orf69Q8N8R5 385 aa17.03■□□□□ 0.32
CCDC43-203ENST00000588210 TEPSINQ96N21 525 aa17.03■□□□□ 0.32
CCDC43-203ENST00000588210 GBA2Q9HCG7 927 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-203ENST00000588210 MRVI1Q9Y6F6 885 aa17.03■□□□□ 0.32
CCDC43-203ENST00000588210 MAGEB6P1A0A0J9YX57 407 aa17.02■□□□□ 0.32
CCDC43-203ENST00000588210 DYNLL1P63167 89 aaKnown RBP17.02■□□□□ 0.32
CCDC43-203ENST00000588210 RESTQ13127 1097 aa17.02■□□□□ 0.32
CCDC43-203ENST00000588210 STK3Q13188 491 aa17.02■□□□□ 0.32
CCDC43-203ENST00000588210 NBPF12Q5TAG4 269 aaPredicted RBP17.02■□□□□ 0.32
CCDC43-203ENST00000588210 RIOK1Q9BRS2 568 aaKnown RBP17.02■□□□□ 0.32
CCDC43-203ENST00000588210 RNF113AO15541 343 aaKnown RBP17.01■□□□□ 0.31
CCDC43-203ENST00000588210 CYP21A2P08686 494 aa17.01■□□□□ 0.31
CCDC43-203ENST00000588210 PICALMQ13492 652 aa17.01■□□□□ 0.31
CCDC43-203ENST00000588210 CCDC129Q6ZRS4 1044 aa17.01■□□□□ 0.31
CCDC43-203ENST00000588210 Q6ZUG5 572 aa17.01■□□□□ 0.31
CCDC43-203ENST00000588210 HOOK2Q96ED9 719 aa17.01■□□□□ 0.31
CCDC43-203ENST00000588210 PRIMPOLQ96LW4 560 aa17.01■□□□□ 0.31
CCDC43-203ENST00000588210 CLSTN2Q9H4D0 955 aa17.01■□□□□ 0.31
CCDC43-203ENST00000588210 DDX4Q9NQI0 724 aaKnown RBP17.01■□□□□ 0.31
CCDC43-203ENST00000588210 JAK2O60674 1132 aa17.01■□□□□ 0.31
CCDC43-203ENST00000588210 MYRIPQ8NFW9 859 aa17.01■□□□□ 0.31
CCDC43-203ENST00000588210 TNMDQ9H2S6 317 aa17.01■□□□□ 0.31
CCDC43-203ENST00000588210 TLL2Q9Y6L7 1015 aa17.01■□□□□ 0.31
CCDC43-203ENST00000588210 GOLGA6L4A6NEF3 574 aa17■□□□□ 0.31
CCDC43-203ENST00000588210 GOLGA6L6A8MZA4 724 aa17■□□□□ 0.31
CCDC43-203ENST00000588210 SLFNL1Q499Z3 407 aa17■□□□□ 0.31
CCDC43-203ENST00000588210 SAPCD2Q86UD0 394 aa17■□□□□ 0.31
CCDC43-203ENST00000588210 SMARCC2Q8TAQ2 1214 aa17■□□□□ 0.31
CCDC43-203ENST00000588210 BRF1Q92994 677 aa17■□□□□ 0.31
CCDC43-203ENST00000588210 SEC62Q99442 399 aaKnown RBP17■□□□□ 0.31
CCDC43-203ENST00000588210 LLPHQ9BRT6 129 aaKnown RBP17■□□□□ 0.31
CCDC43-203ENST00000588210 DACT1Q9NYF0 836 aa17■□□□□ 0.31
CCDC43-203ENST00000588210 ABT1Q9ULW3 272 aaKnown RBP17■□□□□ 0.31
CCDC43-203ENST00000588210 PPP1R12BO60237 982 aaPredicted RBP17■□□□□ 0.31
CCDC43-203ENST00000588210 CHGBP05060 677 aa17■□□□□ 0.31
CCDC43-203ENST00000588210 HMGB1P09429 215 aaKnown RBP17■□□□□ 0.31
CCDC43-203ENST00000588210 RBM10P98175 930 aaKnown RBP17■□□□□ 0.31
CCDC43-203ENST00000588210 MTERF4Q7Z6M4 381 aaKnown RBP17■□□□□ 0.31
CCDC43-203ENST00000588210 CDAN1Q8IWY9 1227 aa17■□□□□ 0.31
CCDC43-203ENST00000588210 TGFBRAP1Q8WUH2 860 aa17■□□□□ 0.31
CCDC43-203ENST00000588210 APPBP2Q92624 585 aa17■□□□□ 0.31
CCDC43-203ENST00000588210 ZSCAN16Q9H4T2 348 aaPredicted RBP17■□□□□ 0.31
CCDC43-203ENST00000588210 HMGN5P82970 282 aaKnown RBP16.99■□□□□ 0.31
CCDC43-203ENST00000588210 DNTTIP2Q5QJE6 756 aaKnown RBP16.99■□□□□ 0.31
CCDC43-203ENST00000588210 ZFPM1Q8IX07 1006 aa16.99■□□□□ 0.31
CCDC43-203ENST00000588210 OSBPL5Q9H0X9 879 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms