RNA–Protein interactions for RNA: ENST00000586835.1

TMED1-202, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2

Gene TMED1, Length 713 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-202ENST00000586835 ROBO3Q96MS0 1386 aa16.48■□□□□ 0.23
TMED1-202ENST00000586835 DDX60LQ5H9U9 1706 aaKnown RBP16.48■□□□□ 0.23
TMED1-202ENST00000586835 MYH1P12882 1939 aa16.47■□□□□ 0.23
TMED1-202ENST00000586835 USP2O75604 605 aaPredicted RBP16.47■□□□□ 0.23
TMED1-202ENST00000586835 CD2BP2O95400 341 aaKnown RBP16.47■□□□□ 0.23
TMED1-202ENST00000586835 MCM5P33992 734 aa16.47■□□□□ 0.23
TMED1-202ENST00000586835 CUL4AQ13619 759 aa16.47■□□□□ 0.23
TMED1-202ENST00000586835 MFSD6Q6ZSS7 791 aa16.47■□□□□ 0.23
TMED1-202ENST00000586835 RALYLQ86SE5 291 aaKnown RBP16.47■□□□□ 0.23
TMED1-202ENST00000586835 MB21D2Q8IYB1 491 aaPredicted RBP16.47■□□□□ 0.23
TMED1-202ENST00000586835 SH3RF3Q8TEJ3 882 aaPredicted RBP16.47■□□□□ 0.23
TMED1-202ENST00000586835 INTS4Q96HW7 963 aaKnown RBP16.47■□□□□ 0.23
TMED1-202ENST00000586835 NBPF3Q9H094 633 aa16.47■□□□□ 0.23
TMED1-202ENST00000586835 TAF6LQ9Y6J9 622 aa16.47■□□□□ 0.23
TMED1-202ENST00000586835 UNCXA6NJT0 531 aa16.46■□□□□ 0.23
TMED1-202ENST00000586835 FOXN1O15353 648 aa16.46■□□□□ 0.23
TMED1-202ENST00000586835 ORC4O43929 436 aa16.46■□□□□ 0.23
TMED1-202ENST00000586835 USP5P45974 858 aa16.46■□□□□ 0.23
TMED1-202ENST00000586835 AK2P54819 239 aa16.46■□□□□ 0.23
TMED1-202ENST00000586835 EVCP57679 992 aa16.46■□□□□ 0.23
TMED1-202ENST00000586835 KIF23Q02241 960 aaPredicted RBP16.46■□□□□ 0.23
TMED1-202ENST00000586835 NFIAQ12857 509 aa16.46■□□□□ 0.23
TMED1-202ENST00000586835 C12orf60Q5U649 245 aa16.46■□□□□ 0.23
TMED1-202ENST00000586835 CTR9Q6PD62 1173 aa16.46■□□□□ 0.23
TMED1-202ENST00000586835 TEX11Q8IYF3 940 aa16.46■□□□□ 0.23
TMED1-202ENST00000586835 FAM151AQ8WW52 585 aa16.46■□□□□ 0.23
TMED1-202ENST00000586835 IDI2Q9BXS1 227 aa16.46■□□□□ 0.23
TMED1-202ENST00000586835 ZNF287Q9HBT7 754 aa16.46■□□□□ 0.23
TMED1-202ENST00000586835 COL2A1P02458 1487 aaPredicted RBP16.46■□□□□ 0.23
TMED1-202ENST00000586835 USP17L12C9JPN9 530 aa16.45■□□□□ 0.22
TMED1-202ENST00000586835 USP17L21D6R901 530 aa16.45■□□□□ 0.22
TMED1-202ENST00000586835 IREB2P48200 963 aaKnown RBP16.45■□□□□ 0.22
TMED1-202ENST00000586835 TBC1D10CQ8IV04 446 aa16.45■□□□□ 0.22
TMED1-202ENST00000586835 TMEM87BQ96K49 555 aa16.45■□□□□ 0.22
TMED1-202ENST00000586835 FAM198AQ9UFP1 575 aa16.45■□□□□ 0.22
TMED1-202ENST00000586835 CTCFP49711 727 aaPredicted RBP16.44■□□□□ 0.22
TMED1-202ENST00000586835 HAND2P61296 217 aa16.44■□□□□ 0.22
TMED1-202ENST00000586835 PDE4BQ07343 736 aa16.44■□□□□ 0.22
TMED1-202ENST00000586835 TCP10Q12799 353 aa16.44■□□□□ 0.22
TMED1-202ENST00000586835 TMX3Q96JJ7 454 aa16.44■□□□□ 0.22
TMED1-202ENST00000586835 BEGAINQ9BUH8 593 aa16.44■□□□□ 0.22
TMED1-202ENST00000586835 CWC22Q9HCG8 908 aaKnown RBP16.44■□□□□ 0.22
TMED1-202ENST00000586835 MCM9Q9NXL9 1143 aa16.44■□□□□ 0.22
TMED1-202ENST00000586835 FLT1P17948 1338 aa16.44■□□□□ 0.22
TMED1-202ENST00000586835 ENTPD3O75355 529 aa16.43■□□□□ 0.22
TMED1-202ENST00000586835 WDHD1O75717 1129 aaPredicted RBP16.43■□□□□ 0.22
TMED1-202ENST00000586835 REM2Q8IYK8 340 aaPredicted RBP16.43■□□□□ 0.22
TMED1-202ENST00000586835 ANKRD13AQ8IZ07 590 aa16.43■□□□□ 0.22
TMED1-202ENST00000586835 TMTC2Q8N394 836 aa16.43■□□□□ 0.22
TMED1-202ENST00000586835 TGFBRAP1Q8WUH2 860 aa16.43■□□□□ 0.22
TMED1-202ENST00000586835 ESR2Q92731 530 aa16.43■□□□□ 0.22
TMED1-202ENST00000586835 HOOK2Q96ED9 719 aa16.43■□□□□ 0.22
TMED1-202ENST00000586835 SLC10A4Q96EP9 437 aa16.43■□□□□ 0.22
TMED1-202ENST00000586835 CLMNQ96JQ2 1002 aa16.43■□□□□ 0.22
TMED1-202ENST00000586835 CSRNP1Q96S65 589 aa16.43■□□□□ 0.22
TMED1-202ENST00000586835 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.43■□□□□ 0.22
TMED1-202ENST00000586835 MINDY4BA8MYZ0 360 aa16.42■□□□□ 0.22
TMED1-202ENST00000586835 CA12O43570 354 aa16.42■□□□□ 0.22
TMED1-202ENST00000586835 PDIA4P13667 645 aaKnown RBP16.42■□□□□ 0.22
TMED1-202ENST00000586835 RCAN1P53805 252 aa16.42■□□□□ 0.22
TMED1-202ENST00000586835 TOB2Q14106 344 aaPredicted RBP16.42■□□□□ 0.22
TMED1-202ENST00000586835 CCDC178Q5BJE1 867 aa16.42■□□□□ 0.22
TMED1-202ENST00000586835 SPRYD7Q5W111 196 aa16.42■□□□□ 0.22
TMED1-202ENST00000586835 TTC6Q86TZ1 520 aa16.42■□□□□ 0.22
TMED1-202ENST00000586835 ZFPM1Q8IX07 1006 aa16.42■□□□□ 0.22
TMED1-202ENST00000586835 ZNF274Q96GC6 653 aaPredicted RBP16.42■□□□□ 0.22
TMED1-202ENST00000586835 DHX36Q9H2U1 1008 aaKnown RBP16.42■□□□□ 0.22
TMED1-202ENST00000586835 CIZ1Q9ULV3 898 aaPredicted RBP16.42■□□□□ 0.22
TMED1-202ENST00000586835 HSPA8P11142 646 aaKnown RBP16.41■□□□□ 0.22
TMED1-202ENST00000586835 LIFRP42702 1097 aa16.41■□□□□ 0.22
TMED1-202ENST00000586835 MAP3K9P80192 1104 aa16.41■□□□□ 0.22
TMED1-202ENST00000586835 SART3Q15020 963 aaKnown RBP16.41■□□□□ 0.22
TMED1-202ENST00000586835 DCAF15Q66K64 600 aa16.41■□□□□ 0.22
TMED1-202ENST00000586835 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.41■□□□□ 0.22
TMED1-202ENST00000586835 Q6ZUG5 572 aa16.41■□□□□ 0.22
TMED1-202ENST00000586835 SGMS1Q86VZ5 419 aa16.41■□□□□ 0.22
TMED1-202ENST00000586835 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.41■□□□□ 0.221e-8■■□□□ 14.1
TMED1-202ENST00000586835 EHD4Q9H223 541 aa16.41■□□□□ 0.22
TMED1-202ENST00000586835 PRC1O43663 620 aa16.4■□□□□ 0.22
TMED1-202ENST00000586835 HSP90AA1P07900 732 aaKnown RBP16.4■□□□□ 0.22
TMED1-202ENST00000586835 CTDSPL2Q05D32 466 aa16.4■□□□□ 0.22
TMED1-202ENST00000586835 WNK4Q96J92 1243 aa16.4■□□□□ 0.22
TMED1-202ENST00000586835 DDX4Q9NQI0 724 aaKnown RBP16.4■□□□□ 0.22
TMED1-202ENST00000586835 PRDM10Q9NQV6 1147 aa16.4■□□□□ 0.22
TMED1-202ENST00000586835 ZSWIM5Q9P217 1185 aa16.4■□□□□ 0.22
TMED1-202ENST00000586835 SWAP70Q9UH65 585 aa16.4■□□□□ 0.22
TMED1-202ENST00000586835 NEDD4P46934 1319 aa16.4■□□□□ 0.22
TMED1-202ENST00000586835 ATRNL1Q5VV63 1379 aa16.39■□□□□ 0.21
TMED1-202ENST00000586835 OTOFQ9HC10 1997 aa16.39■□□□□ 0.21
TMED1-202ENST00000586835 B4E1Z4 1266 aa16.39■□□□□ 0.21
TMED1-202ENST00000586835 POLR3DP05423 398 aaPredicted RBP16.39■□□□□ 0.21
TMED1-202ENST00000586835 ZBTB48P10074 688 aaPredicted RBP16.39■□□□□ 0.21
TMED1-202ENST00000586835 CPA1P15085 419 aa16.39■□□□□ 0.21
TMED1-202ENST00000586835 DDIT3P35638 169 aa16.39■□□□□ 0.21
TMED1-202ENST00000586835 LBX1P52954 281 aa16.39■□□□□ 0.21
TMED1-202ENST00000586835 ANTXR2P58335 489 aa16.39■□□□□ 0.21
TMED1-202ENST00000586835 FGD1P98174 961 aa16.39■□□□□ 0.21
TMED1-202ENST00000586835 MKRN3Q13064 507 aaKnown RBP16.39■□□□□ 0.21
TMED1-202ENST00000586835 C16orf86Q6ZW13 317 aa16.39■□□□□ 0.21
TMED1-202ENST00000586835 MIGA2Q7L4E1 593 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms