RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 PARP4Q9UKK3 1724 aaKnown RBP5.6□□□□□ -1.51
DDX42-211ENST00000580108 A0A1W2PP64 1363 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 CPDO75976 1380 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 ADAMTS4O75173 837 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 TRPA1O75762 1119 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 PTPRAP18433 802 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 EVA1CP58658 441 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 DUOXA2Q1HG44 320 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 HGSNATQ68CP4 663 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 PTF1AQ7RTS3 328 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 ZNF438Q7Z4V0 828 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 TRIM42Q8IWZ5 723 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 C1orf127Q8N9H9 656 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 KLHL23Q8NBE8 558 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 PBXIP1Q96AQ6 731 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 CEP41Q9BYV8 373 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 CHRDQ9H2X0 955 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 KIF20BQ96Q89 1820 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 NUP188Q5SRE5 1749 aa5.6□□□□□ -1.51
DDX42-211ENST00000580108 USP47Q96K76 1375 aa5.59□□□□□ -1.51
DDX42-211ENST00000580108 HMX2A2RU54 273 aa5.59□□□□□ -1.51
DDX42-211ENST00000580108 H3BRJ5 948 aa5.59□□□□□ -1.51
DDX42-211ENST00000580108 GSC2O15499 205 aa5.59□□□□□ -1.51
DDX42-211ENST00000580108 TRIM37O94972 964 aa5.59□□□□□ -1.51
DDX42-211ENST00000580108 NFIAQ12857 509 aa5.59□□□□□ -1.51
DDX42-211ENST00000580108 UVSSAQ2YD98 709 aa5.59□□□□□ -1.51
DDX42-211ENST00000580108 FAM117BQ6P1L5 589 aa5.59□□□□□ -1.51
DDX42-211ENST00000580108 ARHGEF25Q86VW2 580 aa5.59□□□□□ -1.51
DDX42-211ENST00000580108 EDEM1Q92611 657 aa5.59□□□□□ -1.51
DDX42-211ENST00000580108 MYRFLQ96LU7 910 aa5.59□□□□□ -1.51
DDX42-211ENST00000580108 SEC31BQ9NQW1 1179 aa5.59□□□□□ -1.51
DDX42-211ENST00000580108 RREB1Q92766 1687 aa5.59□□□□□ -1.52
DDX42-211ENST00000580108 AATKQ6ZMQ8 1374 aa5.58□□□□□ -1.52
DDX42-211ENST00000580108 PRR19A6NJB7 356 aa5.58□□□□□ -1.52
DDX42-211ENST00000580108 COBLO75128 1261 aa5.58□□□□□ -1.52
DDX42-211ENST00000580108 PDGFAP04085 211 aa5.58□□□□□ -1.52
DDX42-211ENST00000580108 SPINK2P20155 84 aa5.58□□□□□ -1.52
DDX42-211ENST00000580108 PREPP48147 710 aa5.58□□□□□ -1.52
DDX42-211ENST00000580108 EZH2Q15910 746 aaKnown RBP5.58□□□□□ -1.52
DDX42-211ENST00000580108 RNF43Q68DV7 783 aa5.58□□□□□ -1.52
DDX42-211ENST00000580108 XKR5Q6UX68 686 aa5.58□□□□□ -1.52
DDX42-211ENST00000580108 TCP11L2Q8N4U5 519 aa5.58□□□□□ -1.52
DDX42-211ENST00000580108 HELQQ8TDG4 1101 aa5.58□□□□□ -1.52
DDX42-211ENST00000580108 DZANK1Q9NVP4 752 aa5.58□□□□□ -1.52
DDX42-211ENST00000580108 OAS3Q9Y6K5 1087 aaKnown RBP5.58□□□□□ -1.52
DDX42-211ENST00000580108 KAT6BQ8WYB5 2073 aa5.58□□□□□ -1.52
DDX42-211ENST00000580108 OVOS2A0A0J9YW53 1432 aa5.57□□□□□ -1.52
DDX42-211ENST00000580108 CRB1P82279 1406 aa5.57□□□□□ -1.52
DDX42-211ENST00000580108 OVOS2Q6IE36 1432 aa5.57□□□□□ -1.52
DDX42-211ENST00000580108 EDC4Q6P2E9 1401 aaKnown RBP5.57□□□□□ -1.52
DDX42-211ENST00000580108 TTC21AQ8NDW8 1320 aa5.57□□□□□ -1.52
DDX42-211ENST00000580108 NLRP12P59046 1061 aa5.57□□□□□ -1.52
DDX42-211ENST00000580108 DNM1Q05193 864 aaKnown RBP5.57□□□□□ -1.52
DDX42-211ENST00000580108 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.57□□□□□ -1.52
DDX42-211ENST00000580108 TOM1L2Q6ZVM7 507 aa5.57□□□□□ -1.52
DDX42-211ENST00000580108 FAM20CQ8IXL6 584 aa5.57□□□□□ -1.52
DDX42-211ENST00000580108 WNT8BQ93098 351 aa5.57□□□□□ -1.52
DDX42-211ENST00000580108 LTV1Q96GA3 475 aaPredicted RBP5.57□□□□□ -1.52
DDX42-211ENST00000580108 POLR3GLQ9BT43 218 aa5.57□□□□□ -1.52
DDX42-211ENST00000580108 SOX13Q9UN79 622 aa5.57□□□□□ -1.52
DDX42-211ENST00000580108 SHANK3Q9BYB0 1731 aa5.57□□□□□ -1.52
DDX42-211ENST00000580108 DISP2A7MBM2 1401 aa5.57□□□□□ -1.52
DDX42-211ENST00000580108 FAM208AQ9UK61 1670 aaKnown RBP5.56□□□□□ -1.52
DDX42-211ENST00000580108 BRD4O60885 1362 aaPredicted RBP5.56□□□□□ -1.52
DDX42-211ENST00000580108 USP31Q70CQ4 1352 aa5.56□□□□□ -1.52
DDX42-211ENST00000580108 WDR17Q8IZU2 1322 aa5.56□□□□□ -1.52
DDX42-211ENST00000580108 PDE2AO00408 941 aaPredicted RBP5.56□□□□□ -1.52
DDX42-211ENST00000580108 CES1P23141 567 aa5.56□□□□□ -1.52
DDX42-211ENST00000580108 MPSTP25325 297 aa5.56□□□□□ -1.52
DDX42-211ENST00000580108 EIF1AXP47813 144 aaKnown RBP5.56□□□□□ -1.52
DDX42-211ENST00000580108 GP2P55259 537 aaKnown RBP5.56□□□□□ -1.52
DDX42-211ENST00000580108 SF3B2Q13435 895 aaKnown RBP5.56□□□□□ -1.52
DDX42-211ENST00000580108 MTMR3Q13615 1198 aa5.56□□□□□ -1.52
DDX42-211ENST00000580108 HDGFL2Q7Z4V5 671 aaPredicted RBP5.56□□□□□ -1.52
DDX42-211ENST00000580108 MARCH10Q8NA82 808 aaPredicted RBP5.56□□□□□ -1.52
DDX42-211ENST00000580108 DBNDD2Q9BQY9 259 aa5.56□□□□□ -1.52
DDX42-211ENST00000580108 KRTAP9-9Q9BYP9 154 aa5.56□□□□□ -1.52
DDX42-211ENST00000580108 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
DDX42-211ENST00000580108 OSGEPQ9NPF4 335 aa5.56□□□□□ -1.52
DDX42-211ENST00000580108 EREGO14944 169 aa5.55□□□□□ -1.52
DDX42-211ENST00000580108 BMP3P12645 472 aa5.55□□□□□ -1.52
DDX42-211ENST00000580108 PDE3BQ13370 1112 aa5.55□□□□□ -1.52
DDX42-211ENST00000580108 R3HDM1Q15032 1099 aaKnown RBP5.55□□□□□ -1.52
DDX42-211ENST00000580108 RRS1Q15050 365 aaKnown RBP5.55□□□□□ -1.52
DDX42-211ENST00000580108 C8orf34Q49A92 452 aa5.55□□□□□ -1.52
DDX42-211ENST00000580108 NOM1Q5C9Z4 860 aaKnown RBP5.55□□□□□ -1.52
DDX42-211ENST00000580108 BEND4Q6ZU67 534 aa5.55□□□□□ -1.52
DDX42-211ENST00000580108 USHBP1Q8N6Y0 703 aa5.55□□□□□ -1.52
DDX42-211ENST00000580108 SHKBP1Q8TBC3 707 aa5.55□□□□□ -1.52
DDX42-211ENST00000580108 ANKRD24Q8TF21 1146 aa5.55□□□□□ -1.52
DDX42-211ENST00000580108 SLC7A3Q8WY07 619 aa5.55□□□□□ -1.52
DDX42-211ENST00000580108 CAMKK2Q96RR4 588 aa5.55□□□□□ -1.52
DDX42-211ENST00000580108 FAM83CQ9BQN1 747 aa5.55□□□□□ -1.52
DDX42-211ENST00000580108 ZKSCAN3Q9BRR0 538 aa5.55□□□□□ -1.52
DDX42-211ENST00000580108 RUSC1Q9BVN2 902 aa5.55□□□□□ -1.52
DDX42-211ENST00000580108 RNF208Q9H0X6 261 aa5.55□□□□□ -1.52
DDX42-211ENST00000580108 GOLGA2P5Q9HBQ8 144 aa5.55□□□□□ -1.52
DDX42-211ENST00000580108 NLRP2Q9NX02 1062 aa5.55□□□□□ -1.52
DDX42-211ENST00000580108 BTAF1O14981 1849 aa5.55□□□□□ -1.52
DDX42-211ENST00000580108 DOT1LQ8TEK3 1739 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms