RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 IQCA1Q86XH1 822 aa10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 ENAHQ8N8S7 591 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CLIC6Q96NY7 704 aa10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 NOL10Q9BSC4 688 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 ATP8A2Q9NTI2 1148 aa10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 FAM13BQ9NYF5 915 aa10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 TFCP2L1Q9NZI6 479 aa10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 IMPACTQ9P2X3 320 aa10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 ARPP21Q9UBL0 812 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 FBXO2Q9UK22 296 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 KCNH3Q9ULD8 1083 aa10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 IRS2Q9Y4H2 1338 aa10.75□□□□□ -0.69
CDK5RAP3-208ENST00000578525 SBF2Q86WG5 1849 aa10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 USP17L12C9JPN9 530 aa10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 USP17L21D6R901 530 aa10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 SMIM22K7EJ46 135 aa10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 MYO1BO43795 1136 aa10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 TM4SF1P30408 202 aa10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 GTF2F1P35269 517 aaKnown RBP eCLIP10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 KRT2P35908 639 aa10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 NT5C2P49902 561 aa10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 FUT2Q10981 343 aa10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 HSP90AA2PQ14568 343 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 NCAPHQ15003 741 aa10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 LRRC8AQ8IWT6 810 aa10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 ZNF579Q8NAF0 562 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CNNM3Q8NE01 707 aa10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 ARHGEF1Q92888 912 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 OSBPL5Q9H0X9 879 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 DCP1AQ9NPI6 582 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 HOOK1Q9UJC3 728 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CCDC88AQ3V6T2 1871 aa10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 BAZ2AQ9UIF9 1905 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-208ENST00000578525 UBAP1LF5GYI3 381 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 SMC2O95347 1197 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 BMP15O95972 392 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 NR5A1Q13285 461 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 PNOCQ13519 176 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 PKN1Q16512 942 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 OLFM4Q6UX06 510 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 TMTC3Q6ZXV5 915 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 METTL16Q86W50 562 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CMTR1Q8N1G2 835 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CCDC82Q8N4S0 544 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CCDC150Q8NCX0 1101 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 OXER1Q8TDS5 423 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 MAP7D2Q96T17 732 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 PHF20Q9BVI0 1012 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 BRMS1Q9HCU9 246 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 AATFQ9NY61 560 aaKnown RBP eCLIP10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 USP21Q9UK80 565 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 LEMD3Q9Y2U8 911 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 SRPRBQ9Y5M8 271 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 MYH6P13533 1939 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 SPATA31A6Q5VVP1 1343 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CNTNAP5Q8WYK1 1306 aa10.73□□□□□ -0.69
CDK5RAP3-208ENST00000578525 TRIM75PA6NK02 468 aa10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CBFA2T2O43439 604 aa10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 PRDM1O75626 825 aa10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 PLEKHA8P1O95397 391 aa10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 PRDX5P30044 214 aa10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CCZ1BP86790 482 aa10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CCZ1P86791 482 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 MYL5Q02045 173 aa10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 TROAPQ12815 778 aa10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 GRAPQ13588 217 aa10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 LONRF3Q496Y0 759 aa10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 DZIP1Q86YF9 867 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CCDC24Q8N4L8 307 aa10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CTCFLQ8NI51 663 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 WDR66Q8TBY9 1149 aa10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 GRAPLQ8TC17 118 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 XPO4Q9C0E2 1151 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 IFNKQ9P0W0 207 aa10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 VPS54Q9P1Q0 977 aa10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 PCDHB6Q9Y5E3 794 aa10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 MYH2Q9UKX2 1941 aa10.72□□□□□ -0.69
CDK5RAP3-208ENST00000578525 NPHP1O15259 732 aa10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CYP2D6P10635 497 aa10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 RFC4P35249 363 aa10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 GSTO1P78417 241 aa10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 RBM10P98175 930 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 FANCCQ00597 558 aa10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 MDM2Q00987 491 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 PDE4BQ07343 736 aa10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 ARID5BQ14865 1188 aa10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 POSTNQ15063 836 aa10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 TPD52L1Q16890 204 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 KANK3Q6NY19 840 aa10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 C15orf52Q6ZUT6 534 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 TMC6Q7Z403 805 aa10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 MTERF4Q7Z6M4 381 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 FILIP1Q7Z7B0 1213 aa10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 SHISA4Q96DD7 197 aa10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 CABP5Q9NP86 173 aa10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 KCND1Q9NSA2 647 aa10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 SERTAD1Q9UHV2 236 aa10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 PCDHA5Q9Y5H7 936 aa10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 V9GY48 417 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-208ENST00000578525 NAV1Q8NEY1 1877 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms