RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 C19orf81C9J6K1 198 aa15.34■□□□□ 0.05
SMARCD2-207ENST00000578234 RLBP1P12271 317 aa15.34■□□□□ 0.05
SMARCD2-207ENST00000578234 HOXA7P31268 230 aaPredicted RBP15.34■□□□□ 0.05
SMARCD2-207ENST00000578234 CERS3Q8IU89 383 aa15.34■□□□□ 0.05
SMARCD2-207ENST00000578234 CCAR1Q8IX12 1150 aaKnown RBP15.34■□□□□ 0.05
SMARCD2-207ENST00000578234 CRACR2BQ8N4Y2 399 aaPredicted RBP15.34■□□□□ 0.05
SMARCD2-207ENST00000578234 EAF2Q96CJ1 260 aaPredicted RBP15.34■□□□□ 0.05
SMARCD2-207ENST00000578234 PAK6Q9NQU5 681 aaPredicted RBP15.34■□□□□ 0.05
SMARCD2-207ENST00000578234 RBM27Q9P2N5 1060 aaKnown RBP15.34■□□□□ 0.05
SMARCD2-207ENST00000578234 MORF4L1Q9UBU8 362 aa15.34■□□□□ 0.05
SMARCD2-207ENST00000578234 RCAN3Q9UKA8 241 aa15.34■□□□□ 0.05
SMARCD2-207ENST00000578234 USP17L10C9JJH3 530 aa15.33■□□□□ 0.04
SMARCD2-207ENST00000578234 CYP7A1P22680 504 aa15.33■□□□□ 0.04
SMARCD2-207ENST00000578234 JAG1P78504 1218 aa15.33■□□□□ 0.04
SMARCD2-207ENST00000578234 MTMR2Q13614 643 aa15.33■□□□□ 0.04
SMARCD2-207ENST00000578234 TMED8Q6PL24 325 aaPredicted RBP15.33■□□□□ 0.04
SMARCD2-207ENST00000578234 CRISPLD2Q9H0B8 497 aa15.33■□□□□ 0.04
SMARCD2-207ENST00000578234 CCDC8Q9H0W5 538 aaPredicted RBP15.33■□□□□ 0.04
SMARCD2-207ENST00000578234 BCL11AQ9H165 835 aa15.33■□□□□ 0.04
SMARCD2-207ENST00000578234 CWC22Q9HCG8 908 aaKnown RBP15.33■□□□□ 0.04
SMARCD2-207ENST00000578234 TLR7Q9NYK1 1049 aaKnown RBP15.33■□□□□ 0.04
SMARCD2-207ENST00000578234 TMOD4Q9NZQ9 345 aa15.33■□□□□ 0.04
SMARCD2-207ENST00000578234 GJD2Q9UKL4 321 aa15.33■□□□□ 0.04
SMARCD2-207ENST00000578234 IDH1O75874 414 aaKnown RBP15.32■□□□□ 0.04
SMARCD2-207ENST00000578234 HLA-DOAP06340 250 aa15.32■□□□□ 0.04
SMARCD2-207ENST00000578234 DYNLL1P63167 89 aaKnown RBP15.32■□□□□ 0.04
SMARCD2-207ENST00000578234 IRX3P78415 501 aaPredicted RBP15.32■□□□□ 0.04
SMARCD2-207ENST00000578234 CEP85Q6P2H3 762 aa15.32■□□□□ 0.04
SMARCD2-207ENST00000578234 RANBP2P49792 3224 aaKnown RBP15.32■□□□□ 0.04
SMARCD2-207ENST00000578234 HMGCRP04035 888 aa15.31■□□□□ 0.04
SMARCD2-207ENST00000578234 ERC1Q8IUD2 1116 aa15.31■□□□□ 0.04
SMARCD2-207ENST00000578234 P2RX7Q99572 595 aaKnown RBP15.31■□□□□ 0.04
SMARCD2-207ENST00000578234 SAP30BPQ9UHR5 308 aaKnown RBP15.31■□□□□ 0.04
SMARCD2-207ENST00000578234 ZBTB21Q9ULJ3 1066 aa15.31■□□□□ 0.04
SMARCD2-207ENST00000578234 GDF11O95390 407 aa15.3■□□□□ 0.04
SMARCD2-207ENST00000578234 HERVK_113P62684 666 aa15.3■□□□□ 0.04
SMARCD2-207ENST00000578234 MAP3K12Q12852 859 aa15.3■□□□□ 0.04
SMARCD2-207ENST00000578234 TATDN1Q6P1N9 297 aa15.3■□□□□ 0.04
SMARCD2-207ENST00000578234 PAWRQ96IZ0 340 aaKnown RBP15.3■□□□□ 0.04
SMARCD2-207ENST00000578234 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.3■□□□□ 0.04
SMARCD2-207ENST00000578234 RPTORQ8N122 1335 aa15.29■□□□□ 0.04
SMARCD2-207ENST00000578234 CYP2B6P20813 491 aa15.29■□□□□ 0.04
SMARCD2-207ENST00000578234 USP5P45974 858 aa15.29■□□□□ 0.04
SMARCD2-207ENST00000578234 SHROOM1Q2M3G4 852 aaPredicted RBP15.29■□□□□ 0.04
SMARCD2-207ENST00000578234 HSP90AB4PQ58FF6 505 aa15.29■□□□□ 0.04
SMARCD2-207ENST00000578234 MAGEB6Q8N7X4 407 aa15.29■□□□□ 0.04
SMARCD2-207ENST00000578234 ANKLE1Q8NAG6 615 aa15.29■□□□□ 0.04
SMARCD2-207ENST00000578234 MIGA1Q8NAN2 632 aa15.29■□□□□ 0.04
SMARCD2-207ENST00000578234 GPRC5AQ8NFJ5 357 aa15.29■□□□□ 0.04
SMARCD2-207ENST00000578234 EHD4Q9H223 541 aa15.29■□□□□ 0.04
SMARCD2-207ENST00000578234 PRO3102Q9H379 93 aa15.29■□□□□ 0.04
SMARCD2-207ENST00000578234 HMX1Q9NP08 348 aaPredicted RBP15.29■□□□□ 0.04
SMARCD2-207ENST00000578234 RBPJLQ9UBG7 517 aa15.29■□□□□ 0.04
SMARCD2-207ENST00000578234 EXOC6BQ9Y2D4 811 aa15.29■□□□□ 0.04
SMARCD2-207ENST00000578234 MYH1P12882 1939 aa15.29■□□□□ 0.04
SMARCD2-207ENST00000578234 XRCC5P13010 732 aaKnown RBP15.28■□□□□ 0.04
SMARCD2-207ENST00000578234 NECAB2Q7Z6G3 386 aa15.28■□□□□ 0.04
SMARCD2-207ENST00000578234 TTC6Q86TZ1 520 aa15.28■□□□□ 0.04
SMARCD2-207ENST00000578234 AACSQ86V21 672 aa15.28■□□□□ 0.04
SMARCD2-207ENST00000578234 C7orf61Q8IZ16 206 aa15.28■□□□□ 0.04
SMARCD2-207ENST00000578234 GTF3C2Q8WUA4 911 aaPredicted RBP15.28■□□□□ 0.04
SMARCD2-207ENST00000578234 ANTXR1Q9H6X2 564 aa15.28■□□□□ 0.04
SMARCD2-207ENST00000578234 TXNRD2Q9NNW7 524 aa15.28■□□□□ 0.04
SMARCD2-207ENST00000578234 EMILIN3Q9NT22 766 aa15.28■□□□□ 0.04
SMARCD2-207ENST00000578234 STAP2Q9UGK3 403 aa15.28■□□□□ 0.04
SMARCD2-207ENST00000578234 SERPINB13Q9UIV8 391 aa15.28■□□□□ 0.04
SMARCD2-207ENST00000578234 NDUFB9Q9Y6M9 179 aa15.28■□□□□ 0.04
SMARCD2-207ENST00000578234 PLXNB2O15031 1838 aa15.27■□□□□ 0.04
SMARCD2-207ENST00000578234 PEX10O60683 326 aa15.27■□□□□ 0.04
SMARCD2-207ENST00000578234 GH2P01242 217 aa15.27■□□□□ 0.04
SMARCD2-207ENST00000578234 MAPK4P31152 587 aa15.27■□□□□ 0.04
SMARCD2-207ENST00000578234 WDR78Q5VTH9 848 aa15.27■□□□□ 0.04
SMARCD2-207ENST00000578234 USP17L2Q6R6M4 530 aa15.27■□□□□ 0.04
SMARCD2-207ENST00000578234 PANK1Q8TE04 598 aa15.27■□□□□ 0.04
SMARCD2-207ENST00000578234 DIS3LQ8TF46 1054 aaKnown RBP15.27■□□□□ 0.04
SMARCD2-207ENST00000578234 SOCS4Q8WXH5 440 aa15.27■□□□□ 0.04
SMARCD2-207ENST00000578234 C12orf42Q96LP6 360 aa15.27■□□□□ 0.04
SMARCD2-207ENST00000578234 NUDT12Q9BQG2 462 aa15.27■□□□□ 0.04
SMARCD2-207ENST00000578234 PAGR1Q9BTK6 254 aa15.27■□□□□ 0.04
SMARCD2-207ENST00000578234 ZMYND8Q9ULU4 1186 aaPredicted RBP15.27■□□□□ 0.04
SMARCD2-207ENST00000578234 MS4A1P11836 297 aa15.26■□□□□ 0.03
SMARCD2-207ENST00000578234 ERVK-9P63128 1117 aa15.26■□□□□ 0.03
SMARCD2-207ENST00000578234 ERVK-24P63145 666 aa15.26■□□□□ 0.03
SMARCD2-207ENST00000578234 TRIM32Q13049 653 aa15.26■□□□□ 0.03
SMARCD2-207ENST00000578234 PDE3AQ14432 1141 aa15.26■□□□□ 0.03
SMARCD2-207ENST00000578234 TTF1Q15361 905 aaPredicted RBP15.26■□□□□ 0.03
SMARCD2-207ENST00000578234 ZYXQ15942 572 aaKnown RBP15.26■□□□□ 0.03
SMARCD2-207ENST00000578234 Q3C1V9 767 aa15.26■□□□□ 0.03
SMARCD2-207ENST00000578234 MAP3K21Q5TCX8 1036 aa15.26■□□□□ 0.03
SMARCD2-207ENST00000578234 TRMT44Q8IYL2 757 aaKnown RBP15.26■□□□□ 0.03
SMARCD2-207ENST00000578234 RHPN1Q8TCX5 695 aa15.26■□□□□ 0.03
SMARCD2-207ENST00000578234 TRIB2Q92519 343 aa15.26■□□□□ 0.03
SMARCD2-207ENST00000578234 SZT2Q5T011 3432 aa15.26■□□□□ 0.03
SMARCD2-207ENST00000578234 USP14P54578 494 aa15.25■□□□□ 0.03
SMARCD2-207ENST00000578234 CERKLQ49MI3 558 aaPredicted RBP15.25■□□□□ 0.03
SMARCD2-207ENST00000578234 POTEEQ6S8J3 1075 aa15.25■□□□□ 0.03
SMARCD2-207ENST00000578234 USP6NLQ92738 828 aa15.25■□□□□ 0.03
SMARCD2-207ENST00000578234 FEZ1Q99689 392 aa15.25■□□□□ 0.03
SMARCD2-207ENST00000578234 RIOK1Q9BRS2 568 aaKnown RBP15.25■□□□□ 0.03
SMARCD2-207ENST00000578234 KIAA1683Q9H0B3 1180 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms