RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 CHMLP26374 656 aa18.4■□□□□ 0.54
IFT20-206ENST00000578122 CAP2P40123 477 aa18.4■□□□□ 0.54
IFT20-206ENST00000578122 KIF23Q02241 960 aaPredicted RBP18.4■□□□□ 0.54
IFT20-206ENST00000578122 GABPAQ06546 454 aa18.4■□□□□ 0.54
IFT20-206ENST00000578122 RRP1BQ14684 758 aaKnown RBP18.4■□□□□ 0.54
IFT20-206ENST00000578122 ZNF589Q86UQ0 364 aaPredicted RBP18.4■□□□□ 0.54
IFT20-206ENST00000578122 SCYL3Q8IZE3 742 aa18.4■□□□□ 0.54
IFT20-206ENST00000578122 JMYQ8N9B5 988 aa18.4■□□□□ 0.54
IFT20-206ENST00000578122 ZIC5Q96T25 663 aa18.4■□□□□ 0.54
IFT20-206ENST00000578122 LAMB1P07942 1786 aa18.4■□□□□ 0.54
IFT20-206ENST00000578122 MINDY4BA8MYZ0 360 aa18.39■□□□□ 0.53
IFT20-206ENST00000578122 ZBTB48P10074 688 aaPredicted RBP18.39■□□□□ 0.53
IFT20-206ENST00000578122 GJA5P36382 358 aa18.39■□□□□ 0.53
IFT20-206ENST00000578122 VPS53Q5VIR6 699 aa18.39■□□□□ 0.53
IFT20-206ENST00000578122 RUFY2Q8WXA3 655 aa18.39■□□□□ 0.53
IFT20-206ENST00000578122 OTUD5Q96G74 571 aa18.39■□□□□ 0.53
IFT20-206ENST00000578122 NAPBQ9H115 298 aa18.39■□□□□ 0.53
IFT20-206ENST00000578122 TAOK2Q9UL54 1235 aa18.39■□□□□ 0.53
IFT20-206ENST00000578122 SMIM22K7EJ46 135 aa18.38■□□□□ 0.53
IFT20-206ENST00000578122 FOXP2O15409 715 aa18.38■□□□□ 0.53
IFT20-206ENST00000578122 TATDN1Q6P1N9 297 aa18.38■□□□□ 0.53
IFT20-206ENST00000578122 DYNLL2Q96FJ2 89 aa18.38■□□□□ 0.53
IFT20-206ENST00000578122 SWAP70Q9UH65 585 aa18.38■□□□□ 0.53
IFT20-206ENST00000578122 PHIPQ8WWQ0 1821 aa18.37■□□□□ 0.53
IFT20-206ENST00000578122 HSPD1P10809 573 aaKnown RBP18.37■□□□□ 0.53
IFT20-206ENST00000578122 PTPRAP18433 802 aa18.37■□□□□ 0.53
IFT20-206ENST00000578122 SHMT1P34896 483 aa18.37■□□□□ 0.53
IFT20-206ENST00000578122 PPATQ06203 517 aa18.37■□□□□ 0.53
IFT20-206ENST00000578122 PPIL2Q13356 520 aa18.37■□□□□ 0.53
IFT20-206ENST00000578122 ALX1Q15699 326 aa18.37■□□□□ 0.53
IFT20-206ENST00000578122 SLC44A5Q8NCS7 719 aa18.37■□□□□ 0.53
IFT20-206ENST00000578122 MANSC4A6NHS7 340 aaPredicted RBP18.36■□□□□ 0.53
IFT20-206ENST00000578122 GDF11O95390 407 aa18.36■□□□□ 0.53
IFT20-206ENST00000578122 CDK8P49336 464 aa18.36■□□□□ 0.53
IFT20-206ENST00000578122 CERKLQ49MI3 558 aaPredicted RBP18.36■□□□□ 0.53
IFT20-206ENST00000578122 C16orf86Q6ZW13 317 aa18.36■□□□□ 0.53
IFT20-206ENST00000578122 RAD50Q92878 1312 aa18.36■□□□□ 0.53
IFT20-206ENST00000578122 GINM1Q9NU53 330 aa18.36■□□□□ 0.53
IFT20-206ENST00000578122 ZHX2Q9Y6X8 837 aa18.36■□□□□ 0.53
IFT20-206ENST00000578122 ASNSP08243 561 aa18.35■□□□□ 0.53
IFT20-206ENST00000578122 JAG1P78504 1218 aa18.35■□□□□ 0.53
IFT20-206ENST00000578122 MAP2K1Q02750 393 aaPredicted RBP18.35■□□□□ 0.53
IFT20-206ENST00000578122 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.35■□□□□ 0.53
IFT20-206ENST00000578122 ZBTB21Q9ULJ3 1066 aa18.35■□□□□ 0.53
IFT20-206ENST00000578122 ROBO3Q96MS0 1386 aa18.34■□□□□ 0.53
IFT20-206ENST00000578122 IRF6O14896 467 aa18.34■□□□□ 0.53
IFT20-206ENST00000578122 GH2P01242 217 aa18.34■□□□□ 0.53
IFT20-206ENST00000578122 FGAP02671 866 aa18.34■□□□□ 0.53
IFT20-206ENST00000578122 GTF2A2P52657 109 aa18.34■□□□□ 0.53
IFT20-206ENST00000578122 PPARAQ07869 468 aa18.34■□□□□ 0.53
IFT20-206ENST00000578122 SREBF2Q12772 1141 aa18.34■□□□□ 0.53
IFT20-206ENST00000578122 ABCB5Q2M3G0 1257 aa18.34■□□□□ 0.53
IFT20-206ENST00000578122 SHROOM1Q2M3G4 852 aaPredicted RBP18.34■□□□□ 0.53
IFT20-206ENST00000578122 CCDC84Q86UT8 332 aaPredicted RBP18.34■□□□□ 0.53
IFT20-206ENST00000578122 STK11IPQ8N1F8 1099 aa18.34■□□□□ 0.53
IFT20-206ENST00000578122 IL25Q9H293 177 aa18.34■□□□□ 0.53
IFT20-206ENST00000578122 ZMYM6O95789 1325 aa18.33■□□□□ 0.53
IFT20-206ENST00000578122 USP17L5A8MUK1 530 aa18.33■□□□□ 0.52
IFT20-206ENST00000578122 SGSM2O43147 1006 aa18.33■□□□□ 0.52
IFT20-206ENST00000578122 SLC3A2P08195 630 aaKnown RBP18.33■□□□□ 0.52
IFT20-206ENST00000578122 TM4SF4P48230 202 aa18.33■□□□□ 0.52
IFT20-206ENST00000578122 INHBEP58166 350 aa18.33■□□□□ 0.52
IFT20-206ENST00000578122 SNAPC2Q13487 334 aa18.33■□□□□ 0.52
IFT20-206ENST00000578122 MS4A4AQ96JQ5 239 aa18.33■□□□□ 0.52
IFT20-206ENST00000578122 CABP5Q9NP86 173 aa18.33■□□□□ 0.52
IFT20-206ENST00000578122 WBP1LQ9NX94 342 aa18.33■□□□□ 0.52
IFT20-206ENST00000578122 KCNH4Q9UQ05 1017 aa18.33■□□□□ 0.52
IFT20-206ENST00000578122 AFG3L2Q9Y4W6 797 aa18.33■□□□□ 0.52
IFT20-206ENST00000578122 PTPRFP10586 1907 aa18.33■□□□□ 0.52
IFT20-206ENST00000578122 MPHOSPH10O00566 681 aaKnown RBP18.32■□□□□ 0.52
IFT20-206ENST00000578122 CXCL11O14625 94 aa18.32■□□□□ 0.52
IFT20-206ENST00000578122 CCDC17Q96LX7 622 aa18.32■□□□□ 0.52
IFT20-206ENST00000578122 DSCC1Q9BVC3 393 aa18.32■□□□□ 0.52
IFT20-206ENST00000578122 TBC1D2Q9BYX2 928 aa18.32■□□□□ 0.52
IFT20-206ENST00000578122 MKNK2Q9HBH9 465 aa18.32■□□□□ 0.52
IFT20-206ENST00000578122 AS3MTQ9HBK9 375 aa18.32■□□□□ 0.52
IFT20-206ENST00000578122 CCL15-CCL14A0A0B4J2E2 113 aa18.31■□□□□ 0.52
IFT20-206ENST00000578122 TESPA1A2RU30 521 aaPredicted RBP18.31■□□□□ 0.52
IFT20-206ENST00000578122 CDC45O75419 566 aa18.31■□□□□ 0.52
IFT20-206ENST00000578122 CETPP11597 493 aa18.31■□□□□ 0.52
IFT20-206ENST00000578122 CCL15Q16663 113 aa18.31■□□□□ 0.52
IFT20-206ENST00000578122 ZNF280CQ8ND82 737 aa18.31■□□□□ 0.52
IFT20-206ENST00000578122 BEGAINQ9BUH8 593 aa18.31■□□□□ 0.52
IFT20-206ENST00000578122 ZNF287Q9HBT7 754 aa18.31■□□□□ 0.52
IFT20-206ENST00000578122 ANAPC4Q9UJX5 808 aa18.31■□□□□ 0.52
IFT20-206ENST00000578122 TRIM75PA6NK02 468 aa18.3■□□□□ 0.52
IFT20-206ENST00000578122 AKR1B1P15121 316 aa18.3■□□□□ 0.52
IFT20-206ENST00000578122 CTDSPL2Q05D32 466 aa18.3■□□□□ 0.52
IFT20-206ENST00000578122 PDE4BQ07343 736 aa18.3■□□□□ 0.52
IFT20-206ENST00000578122 SPP2Q13103 211 aa18.3■□□□□ 0.52
IFT20-206ENST00000578122 RAB3GAP1Q15042 981 aa18.3■□□□□ 0.52
IFT20-206ENST00000578122 CASC1Q6TDU7 716 aa18.3■□□□□ 0.52
IFT20-206ENST00000578122 BRI3BPQ8WY22 251 aa18.3■□□□□ 0.52
IFT20-206ENST00000578122 ESYT1Q9BSJ8 1104 aa18.3■□□□□ 0.52
IFT20-206ENST00000578122 WDR18Q9BV38 432 aa18.3■□□□□ 0.52
IFT20-206ENST00000578122 LAMA4Q16363 1823 aa18.3■□□□□ 0.52
IFT20-206ENST00000578122 HSPA1AP0DMV8 641 aaKnown RBP18.29■□□□□ 0.52
IFT20-206ENST00000578122 HSPA1BP0DMV9 641 aaKnown RBP18.29■□□□□ 0.52
IFT20-206ENST00000578122 RASA1P20936 1047 aa18.29■□□□□ 0.52
IFT20-206ENST00000578122 GUCY1A2P33402 732 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms