RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 TXNRD2Q9NNW7 524 aa7.34□□□□□ -1.23
SMG6-219ENST00000575663 DDX4Q9NQI0 724 aaKnown RBP7.34□□□□□ -1.23
SMG6-219ENST00000575663 IVNS1ABPQ9Y6Y0 642 aa7.34□□□□□ -1.23
SMG6-219ENST00000575663 MROH7-TTC4A0A0A0MT08 1334 aa7.33□□□□□ -1.24
SMG6-219ENST00000575663 PTPRFP10586 1907 aa7.33□□□□□ -1.24
SMG6-219ENST00000575663 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.33□□□□□ -1.24
SMG6-219ENST00000575663 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.33□□□□□ -1.24
SMG6-219ENST00000575663 C19orf81C9J6K1 198 aa7.33□□□□□ -1.24
SMG6-219ENST00000575663 NPM3O75607 178 aaKnown RBP7.33□□□□□ -1.24
SMG6-219ENST00000575663 MYCNP04198 464 aaPredicted RBP7.33□□□□□ -1.24
SMG6-219ENST00000575663 ASNSP08243 561 aa7.33□□□□□ -1.24
SMG6-219ENST00000575663 NBPF7P0C2Y1 421 aaPredicted RBP7.33□□□□□ -1.24
SMG6-219ENST00000575663 SNX17Q15036 470 aa7.33□□□□□ -1.24
SMG6-219ENST00000575663 ATP2B3Q16720 1220 aa7.33□□□□□ -1.24
SMG6-219ENST00000575663 TRIM60Q495X7 471 aa7.33□□□□□ -1.24
SMG6-219ENST00000575663 AKNAD1Q5T1N1 836 aa7.33□□□□□ -1.24
SMG6-219ENST00000575663 GJC2Q5T442 439 aaPredicted RBP7.33□□□□□ -1.24
SMG6-219ENST00000575663 C1orf53Q5VUE5 145 aa7.33□□□□□ -1.24
SMG6-219ENST00000575663 SPTY2D1Q68D10 685 aaPredicted RBP7.33□□□□□ -1.24
SMG6-219ENST00000575663 WWC1Q8IX03 1113 aa7.33□□□□□ -1.24
SMG6-219ENST00000575663 KLHDC4Q8TBB5 520 aa7.33□□□□□ -1.24
SMG6-219ENST00000575663 KAZALD1Q96I82 304 aa7.33□□□□□ -1.24
SMG6-219ENST00000575663 P2RX7Q99572 595 aaKnown RBP7.33□□□□□ -1.24
SMG6-219ENST00000575663 WDR18Q9BV38 432 aa7.33□□□□□ -1.24
SMG6-219ENST00000575663 TRIM34Q9BYJ4 488 aa7.33□□□□□ -1.24
SMG6-219ENST00000575663 PORCNQ9H237 461 aa7.33□□□□□ -1.24
SMG6-219ENST00000575663 TSPYL2Q9H2G4 693 aaPredicted RBP7.33□□□□□ -1.24
SMG6-219ENST00000575663 ABCF2Q9UG63 623 aa7.33□□□□□ -1.24
SMG6-219ENST00000575663 HERC5Q9UII4 1024 aaKnown RBP7.33□□□□□ -1.24
SMG6-219ENST00000575663 LTBP2Q14767 1821 aa7.33□□□□□ -1.24
SMG6-219ENST00000575663 USP17L10C9JJH3 530 aa7.32□□□□□ -1.24
SMG6-219ENST00000575663 EYA2O00167 538 aa7.32□□□□□ -1.24
SMG6-219ENST00000575663 VAMP4O75379 141 aa7.32□□□□□ -1.24
SMG6-219ENST00000575663 MAP4K4O95819 1239 aaPredicted RBP7.32□□□□□ -1.24
SMG6-219ENST00000575663 CLTBP09497 229 aa7.32□□□□□ -1.24
SMG6-219ENST00000575663 SLURP2P0DP57 97 aa7.32□□□□□ -1.24
SMG6-219ENST00000575663 FPGSQ05932 587 aa7.32□□□□□ -1.24
SMG6-219ENST00000575663 CCDC174Q6PII3 467 aa7.32□□□□□ -1.24
SMG6-219ENST00000575663 ANKRD44Q8N8A2 993 aa7.32□□□□□ -1.24
SMG6-219ENST00000575663 FAM163AQ96GL9 167 aaPredicted RBP7.32□□□□□ -1.24
SMG6-219ENST00000575663 RBPJLQ9UBG7 517 aa7.32□□□□□ -1.24
SMG6-219ENST00000575663 TACC3Q9Y6A5 838 aa7.32□□□□□ -1.24
SMG6-219ENST00000575663 AK9Q5TCS8 1911 aa7.32□□□□□ -1.24
SMG6-219ENST00000575663 TTC28Q96AY4 2481 aa7.32□□□□□ -1.24
SMG6-219ENST00000575663 PDS5AQ29RF7 1337 aaKnown RBP7.31□□□□□ -1.24
SMG6-219ENST00000575663 TRIM43BA6NCK2 446 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 SLC15A5A6NIM6 579 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 ZBTB22O15209 634 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 PEX10O60683 326 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 HOXC6P09630 235 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 CYBAP13498 195 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 RAG1P15918 1043 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 CYP2C19P33261 490 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 GSTO1P78417 241 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 GRB14Q14449 540 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 AAK1Q2M2I8 961 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 POTEEQ6S8J3 1075 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 CCDC129Q6ZRS4 1044 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 TRIM43Q96BQ3 446 aaPredicted RBP7.31□□□□□ -1.24
SMG6-219ENST00000575663 GINM1Q9NU53 330 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 FLRT1Q9NZU1 646 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 RABGAP1Q9Y3P9 1069 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 PLXNB2O15031 1838 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 PHIPQ8WWQ0 1821 aa7.31□□□□□ -1.24
SMG6-219ENST00000575663 GPR75-ASB3A0A0A6YYF3 556 aa7.3□□□□□ -1.24
SMG6-219ENST00000575663 SEPT4O43236 478 aa7.3□□□□□ -1.24
SMG6-219ENST00000575663 LDHCP07864 332 aa7.3□□□□□ -1.24
SMG6-219ENST00000575663 PTPREP23469 700 aa7.3□□□□□ -1.24
SMG6-219ENST00000575663 ADCYAP1R1P41586 468 aa7.3□□□□□ -1.24
SMG6-219ENST00000575663 PHKA1P46020 1223 aa7.3□□□□□ -1.24
SMG6-219ENST00000575663 RHBDL3P58872 404 aa7.3□□□□□ -1.24
SMG6-219ENST00000575663 EXOSC9Q06265 439 aaKnown RBP7.3□□□□□ -1.24
SMG6-219ENST00000575663 Q3C1V9 767 aa7.3□□□□□ -1.24
SMG6-219ENST00000575663 OLFML2BQ68BL8 750 aa7.3□□□□□ -1.24
SMG6-219ENST00000575663 USP17L2Q6R6M4 530 aa7.3□□□□□ -1.24
SMG6-219ENST00000575663 SH3RF1Q7Z6J0 888 aa7.3□□□□□ -1.24
SMG6-219ENST00000575663 DPP9Q86TI2 863 aa7.3□□□□□ -1.24
SMG6-219ENST00000575663 CRACR2BQ8N4Y2 399 aaPredicted RBP7.3□□□□□ -1.24
SMG6-219ENST00000575663 FEZ1Q99689 392 aa7.3□□□□□ -1.24
SMG6-219ENST00000575663 NOL10Q9BSC4 688 aaKnown RBP7.3□□□□□ -1.24
SMG6-219ENST00000575663 DHX36Q9H2U1 1008 aaKnown RBP7.3□□□□□ -1.24
SMG6-219ENST00000575663 SLC5A4Q9NY91 659 aa7.3□□□□□ -1.24
SMG6-219ENST00000575663 CEP126Q9P2H0 1117 aa7.3□□□□□ -1.24
SMG6-219ENST00000575663 PI4KBQ9UBF8 816 aa7.3□□□□□ -1.24
SMG6-219ENST00000575663 FBXO3Q9UK99 471 aa7.3□□□□□ -1.24
SMG6-219ENST00000575663 USP17L15C9J2P7 530 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 USP17L13C9JLJ4 530 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 USP17L11C9JVI0 530 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 USP17L18D6R9N7 530 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 USP17L22D6RA61 530 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 USP17L17D6RBQ6 530 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 USP17L19D6RCP7 530 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 USP17L20D6RJB6 530 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 KIAA0355O15063 1070 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 PQBP1O60828 265 aaKnown RBP7.29□□□□□ -1.24
SMG6-219ENST00000575663 CIAO1O76071 339 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 IGFBP4P22692 258 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 USP14P54578 494 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 MECOMQ03112 1051 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 TLE2Q04725 743 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms