RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 IFIT1BQ5T764 474 aaKnown RBP33.11■■■□□ 2.89
CTDNEP1-210ENST00000574322 HHIPL2Q6UWX4 724 aa33.11■■■□□ 2.89
CTDNEP1-210ENST00000574322 SYAP1Q96A49 352 aaPredicted RBP33.11■■■□□ 2.89
CTDNEP1-210ENST00000574322 ZNF646O15015 1829 aaPredicted RBP33.1■■■□□ 2.89
CTDNEP1-210ENST00000574322 STRIP1Q5VSL9 837 aa33.1■■■□□ 2.89
CTDNEP1-210ENST00000574322 MAPKAPK5Q8IW41 473 aa33.1■■■□□ 2.89
CTDNEP1-210ENST00000574322 CCDC144CPQ8IYA2 1237 aa33.1■■■□□ 2.89
CTDNEP1-210ENST00000574322 FLT1P17948 1338 aa33.09■■■□□ 2.89
CTDNEP1-210ENST00000574322 CALM1P0DP23 149 aa33.09■■■□□ 2.89
CTDNEP1-210ENST00000574322 CALM2P0DP24 149 aa33.09■■■□□ 2.89
CTDNEP1-210ENST00000574322 CALM3P0DP25 149 aa33.09■■■□□ 2.89
CTDNEP1-210ENST00000574322 TTF2Q9UNY4 1162 aaKnown RBP33.09■■■□□ 2.89
CTDNEP1-210ENST00000574322 ECM29Q5VYK3 1845 aa33.08■■■□□ 2.89
CTDNEP1-210ENST00000574322 DDAH1O94760 285 aa33.08■■■□□ 2.89
CTDNEP1-210ENST00000574322 SSRP1Q08945 709 aaKnown RBP33.08■■■□□ 2.89
CTDNEP1-210ENST00000574322 LEO1Q8WVC0 666 aaPredicted RBP33.08■■■□□ 2.89
CTDNEP1-210ENST00000574322 ANKS1AQ92625 1134 aa33.08■■■□□ 2.89
CTDNEP1-210ENST00000574322 RBM27Q9P2N5 1060 aaKnown RBP33.08■■■□□ 2.89
CTDNEP1-210ENST00000574322 PPIP5K2O43314 1243 aa33.08■■■□□ 2.89
CTDNEP1-210ENST00000574322 KIAA2012Q0VF49 1180 aa33.08■■■□□ 2.89
CTDNEP1-210ENST00000574322 AOC3Q16853 763 aa33.08■■■□□ 2.89
CTDNEP1-210ENST00000574322 CCDC178Q5BJE1 867 aa33.08■■■□□ 2.89
CTDNEP1-210ENST00000574322 CATIPQ7Z7H3 387 aa33.08■■■□□ 2.89
CTDNEP1-210ENST00000574322 WASF1Q92558 559 aa33.08■■■□□ 2.89
CTDNEP1-210ENST00000574322 ALG1Q9BT22 464 aa33.08■■■□□ 2.89
CTDNEP1-210ENST00000574322 ZNF287Q9HBT7 754 aa33.08■■■□□ 2.89
CTDNEP1-210ENST00000574322 POLR3DP05423 398 aaPredicted RBP33.07■■■□□ 2.88
CTDNEP1-210ENST00000574322 FOSBP53539 338 aa33.07■■■□□ 2.88
CTDNEP1-210ENST00000574322 TROAPQ12815 778 aa33.07■■■□□ 2.88
CTDNEP1-210ENST00000574322 NBPF11Q86T75 865 aa33.07■■■□□ 2.88
CTDNEP1-210ENST00000574322 PHKBQ93100 1093 aa33.07■■■□□ 2.88
CTDNEP1-210ENST00000574322 SPATA32Q96LK8 384 aa33.07■■■□□ 2.88
CTDNEP1-210ENST00000574322 DBNDD1Q9H9R9 158 aa33.07■■■□□ 2.88
CTDNEP1-210ENST00000574322 TCP11L1Q9NUJ3 509 aa33.07■■■□□ 2.88
CTDNEP1-210ENST00000574322 TFIP11Q9UBB9 837 aaKnown RBP33.07■■■□□ 2.88
CTDNEP1-210ENST00000574322 GUCY1B3Q02153 619 aa33.06■■■□□ 2.88
CTDNEP1-210ENST00000574322 BRAPQ7Z569 592 aa33.06■■■□□ 2.88
CTDNEP1-210ENST00000574322 CRACR2BQ8N4Y2 399 aaPredicted RBP33.06■■■□□ 2.88
CTDNEP1-210ENST00000574322 FBXW7Q969H0 707 aa33.06■■■□□ 2.88
CTDNEP1-210ENST00000574322 ZNF396Q96N95 335 aaPredicted RBP33.06■■■□□ 2.88
CTDNEP1-210ENST00000574322 VPS33BQ9H267 617 aa33.06■■■□□ 2.88
CTDNEP1-210ENST00000574322 MYH1P12882 1939 aa33.06■■■□□ 2.88
CTDNEP1-210ENST00000574322 TSPY2A6NKD2 308 aa33.05■■■□□ 2.88
CTDNEP1-210ENST00000574322 ECE2O60344 883 aa33.05■■■□□ 2.88
CTDNEP1-210ENST00000574322 PLCD1P51178 756 aa33.05■■■□□ 2.88
CTDNEP1-210ENST00000574322 GAS2L3Q86XJ1 694 aa33.05■■■□□ 2.88
CTDNEP1-210ENST00000574322 HDLBPQ00341 1268 aaKnown RBP33.05■■■□□ 2.88
CTDNEP1-210ENST00000574322 FAM47AQ5JRC9 791 aa33.05■■■□□ 2.88
CTDNEP1-210ENST00000574322 C16orf86Q6ZW13 317 aa33.05■■■□□ 2.88
CTDNEP1-210ENST00000574322 DGKHQ86XP1 1220 aa33.05■■■□□ 2.88
CTDNEP1-210ENST00000574322 LARGE2Q8N3Y3 721 aa33.05■■■□□ 2.88
CTDNEP1-210ENST00000574322 DYNLL2Q96FJ2 89 aa33.05■■■□□ 2.88
CTDNEP1-210ENST00000574322 RBM28Q9NW13 759 aaKnown RBP33.05■■■□□ 2.88
CTDNEP1-210ENST00000574322 SCN9AQ15858 1988 aa33.04■■■□□ 2.88
CTDNEP1-210ENST00000574322 MRE11P49959 708 aa33.04■■■□□ 2.88
CTDNEP1-210ENST00000574322 DACT2Q5SW24 774 aa33.04■■■□□ 2.88
CTDNEP1-210ENST00000574322 TRIM22Q8IYM9 498 aa33.04■■■□□ 2.88
CTDNEP1-210ENST00000574322 RCOR1Q9UKL0 485 aa33.04■■■□□ 2.88
CTDNEP1-210ENST00000574322 LMNB1P20700 586 aa33.03■■■□□ 2.88
CTDNEP1-210ENST00000574322 PRELPP51888 382 aa33.03■■■□□ 2.88
CTDNEP1-210ENST00000574322 OTUD7BQ6GQQ9 843 aa33.03■■■□□ 2.88
CTDNEP1-210ENST00000574322 RCSD1Q6JBY9 416 aa33.03■■■□□ 2.88
CTDNEP1-210ENST00000574322 NUP133Q8WUM0 1156 aa33.03■■■□□ 2.88
CTDNEP1-210ENST00000574322 TEKT1Q969V4 418 aa33.03■■■□□ 2.88
CTDNEP1-210ENST00000574322 MXD3Q9BW11 206 aa33.03■■■□□ 2.88
CTDNEP1-210ENST00000574322 SLC26A6Q9BXS9 759 aa33.03■■■□□ 2.88
CTDNEP1-210ENST00000574322 MKNK2Q9HBH9 465 aa33.03■■■□□ 2.88
CTDNEP1-210ENST00000574322 TFAP4Q01664 338 aa33.02■■■□□ 2.88
CTDNEP1-210ENST00000574322 KIF23Q02241 960 aaPredicted RBP33.02■■■□□ 2.88
CTDNEP1-210ENST00000574322 SAP30BPQ9UHR5 308 aaKnown RBP33.02■■■□□ 2.88
CTDNEP1-210ENST00000574322 KRT40Q6A162 431 aa33.02■■■□□ 2.88
CTDNEP1-210ENST00000574322 RNF26Q9BY78 433 aaPredicted RBP33.02■■■□□ 2.88
CTDNEP1-210ENST00000574322 USP17L3A6NCW0 530 aa33.01■■■□□ 2.87
CTDNEP1-210ENST00000574322 USP17L4A6NCW7 530 aa33.01■■■□□ 2.87
CTDNEP1-210ENST00000574322 DEXIO95424 95 aa33.01■■■□□ 2.87
CTDNEP1-210ENST00000574322 USP17L1Q7RTZ2 530 aa33.01■■■□□ 2.87
CTDNEP1-210ENST00000574322 AIFM3Q96NN9 605 aa33.01■■■□□ 2.87
CTDNEP1-210ENST00000574322 KCNQ5Q9NR82 932 aa33.01■■■□□ 2.87
CTDNEP1-210ENST00000574322 F8W031 263 aaPredicted RBP33■■■□□ 2.87
CTDNEP1-210ENST00000574322 NMT2O60551 498 aa33■■■□□ 2.87
CTDNEP1-210ENST00000574322 RASA1P20936 1047 aa33■■■□□ 2.87
CTDNEP1-210ENST00000574322 FUT2Q10981 343 aa33■■■□□ 2.87
CTDNEP1-210ENST00000574322 ZNF444Q8N0Y2 327 aaPredicted RBP33■■■□□ 2.87
CTDNEP1-210ENST00000574322 ZDHHC15Q96MV8 337 aa33■■■□□ 2.87
CTDNEP1-210ENST00000574322 MAP3K14Q99558 947 aa33■■■□□ 2.87
CTDNEP1-210ENST00000574322 IL17RBQ9NRM6 502 aa33■■■□□ 2.87
CTDNEP1-210ENST00000574322 WDHD1O75717 1129 aaPredicted RBP32.99■■■□□ 2.87
CTDNEP1-210ENST00000574322 APOBEC3HQ6NTF7 200 aaKnown RBP32.99■■■□□ 2.87
CTDNEP1-210ENST00000574322 GJB4Q9NTQ9 266 aa32.99■■■□□ 2.87
CTDNEP1-210ENST00000574322 CDK8P49336 464 aa32.99■■■□□ 2.87
CTDNEP1-210ENST00000574322 CCDC183Q5T5S1 534 aa32.99■■■□□ 2.87
CTDNEP1-210ENST00000574322 JDP2Q8WYK2 163 aa32.99■■■□□ 2.87
CTDNEP1-210ENST00000574322 GRPEL1Q9HAV7 217 aa32.99■■■□□ 2.87
CTDNEP1-210ENST00000574322 TRIM29Q14134 588 aa32.98■■■□□ 2.87
CTDNEP1-210ENST00000574322 SLC4A8Q2Y0W8 1093 aa32.98■■■□□ 2.87
CTDNEP1-210ENST00000574322 USP28Q96RU2 1077 aa32.98■■■□□ 2.87
CTDNEP1-210ENST00000574322 RTEL1Q9NZ71 1219 aa32.98■■■□□ 2.87
CTDNEP1-210ENST00000574322 CRKP46108 304 aa32.97■■■□□ 2.87
CTDNEP1-210ENST00000574322 LRSAM1Q6UWE0 723 aa32.97■■■□□ 2.87
CTDNEP1-210ENST00000574322 NIM1KQ8IY84 436 aa32.97■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms