RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 ALX1Q15699 326 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 MFSD14BQ5SR56 506 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 LARP1BQ659C4 914 aaKnown RBP7.33□□□□□ -1.24
CHD9-217ENST00000565832 CTR9Q6PD62 1173 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 RALYLQ86SE5 291 aaKnown RBP7.33□□□□□ -1.24
CHD9-217ENST00000565832 FERMT3Q86UX7 667 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 RDH13Q8NBN7 331 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 SH3RF3Q8TEJ3 882 aaPredicted RBP7.33□□□□□ -1.24
CHD9-217ENST00000565832 MYL10Q9BUA6 226 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 AGXT2Q9BYV1 514 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 ZC3H12CQ9C0D7 883 aaKnown RBP7.33□□□□□ -1.24
CHD9-217ENST00000565832 DBNDD1Q9H9R9 158 aa7.33□□□□□ -1.24
CHD9-217ENST00000565832 COL11A2P13942 1736 aaPredicted RBP7.32□□□□□ -1.24
CHD9-217ENST00000565832 NRXN2Q9P2S2 1712 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 KLF18A0A0U1RQI7 1052 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 A6NJR5 290 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 USP17L8P0C7I0 530 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 HMGB2P26583 209 aaKnown RBP7.32□□□□□ -1.24
CHD9-217ENST00000565832 PPARAQ07869 468 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 TRDNQ13061 729 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 CSPP1Q1MSJ5 1256 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 AKNAD1Q5T1N1 836 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 MFSD6Q6ZSS7 791 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 C15orf52Q6ZUT6 534 aaKnown RBP7.32□□□□□ -1.24
CHD9-217ENST00000565832 CERS5Q8N5B7 392 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 WDR66Q8TBY9 1149 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 IGDCC4Q8TDY8 1250 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 POM121Q96HA1 1249 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 GBP4Q96PP9 640 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 ARID3AQ99856 593 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 NACAP1Q9BZK3 213 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 DCP1AQ9NPI6 582 aaPredicted RBP7.32□□□□□ -1.24
CHD9-217ENST00000565832 HPS5Q9UPZ3 1129 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 MYH2Q9UKX2 1941 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 BAZ2BQ9UIF8 2168 aaKnown RBP7.32□□□□□ -1.24
CHD9-217ENST00000565832 VPS37CA5D8V6 355 aaPredicted RBP7.32□□□□□ -1.24
CHD9-217ENST00000565832 UBE2Q2LH0YL09 131 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 C21orf2O43822 256 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 PFKFB2O60825 505 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 GNAT2P19087 354 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 NDUFV2P19404 249 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 ADD1P35611 737 aaKnown RBP7.32□□□□□ -1.24
CHD9-217ENST00000565832 VARS2Q5ST30 1063 aaKnown RBP7.32□□□□□ -1.24
CHD9-217ENST00000565832 RSBN1LQ6PCB5 846 aaPredicted RBP7.32□□□□□ -1.24
CHD9-217ENST00000565832 POTEEQ6S8J3 1075 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 CLEC17AQ6ZS10 378 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 CDC37L1Q7L3B6 337 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 CHMP4CQ96CF2 233 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 GJB4Q9NTQ9 266 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 MTMR6Q9Y217 621 aa7.32□□□□□ -1.24
CHD9-217ENST00000565832 SPTLC1O15269 473 aa7.31□□□□□ -1.24
CHD9-217ENST00000565832 NMT2O60551 498 aa7.31□□□□□ -1.24
CHD9-217ENST00000565832 ZSCAN22P10073 491 aaPredicted RBP7.31□□□□□ -1.24
CHD9-217ENST00000565832 FDPSP14324 419 aaKnown RBP7.31□□□□□ -1.24
CHD9-217ENST00000565832 SCNN1DP51172 638 aa7.31□□□□□ -1.24
CHD9-217ENST00000565832 CMTR1Q8N1G2 835 aaKnown RBP7.31□□□□□ -1.24
CHD9-217ENST00000565832 NSUN7Q8NE18 718 aaKnown RBP7.31□□□□□ -1.24
CHD9-217ENST00000565832 TGFBRAP1Q8WUH2 860 aa7.31□□□□□ -1.24
CHD9-217ENST00000565832 C7orf43Q8WVR3 580 aa7.31□□□□□ -1.24
CHD9-217ENST00000565832 LMBRD1Q9NUN5 540 aa7.31□□□□□ -1.24
CHD9-217ENST00000565832 PCDHAC2Q9Y5I4 1007 aa7.31□□□□□ -1.24
CHD9-217ENST00000565832 CCDC88AQ3V6T2 1871 aa7.31□□□□□ -1.24
CHD9-217ENST00000565832 PDS5AQ29RF7 1337 aaKnown RBP7.3□□□□□ -1.24
CHD9-217ENST00000565832 IFIT3O14879 490 aaKnown RBP7.3□□□□□ -1.24
CHD9-217ENST00000565832 KCNA3P22001 575 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 PLCD1P51178 756 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 GUCY1B3Q02153 619 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 QPCTQ16769 361 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 TMEM67Q5HYA8 995 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 FAM47AQ5JRC9 791 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 SPTY2D1Q68D10 685 aaPredicted RBP7.3□□□□□ -1.24
CHD9-217ENST00000565832 OTUD7BQ6GQQ9 843 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 CCDC82Q8N4S0 544 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 DYNLL2Q96FJ2 89 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 ZNF274Q96GC6 653 aaPredicted RBP7.3□□□□□ -1.24
CHD9-217ENST00000565832 LY9Q9HBG7 655 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 MCM9Q9NXL9 1143 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 PPP1R1BQ9UD71 204 aaPredicted RBP7.3□□□□□ -1.24
CHD9-217ENST00000565832 SEPT9Q9UHD8 586 aaPredicted RBP7.3□□□□□ -1.24
CHD9-217ENST00000565832 SAP30BPQ9UHR5 308 aaKnown RBP7.3□□□□□ -1.24
CHD9-217ENST00000565832 CNPY2Q9Y2B0 182 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 LTBP1Q14766 1721 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 WDR33Q9C0J8 1336 aaKnown RBP7.3□□□□□ -1.24
CHD9-217ENST00000565832 SALL1Q9NSC2 1324 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 DUOX1Q9NRD9 1551 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 PTPDC1A2A3K4 754 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 GOLGA8BA8MQT2 603 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 SH2B2O14492 632 aaPredicted RBP7.3□□□□□ -1.24
CHD9-217ENST00000565832 RANBP6O60518 1105 aaKnown RBP7.3□□□□□ -1.24
CHD9-217ENST00000565832 GADD45BO75293 160 aaPredicted RBP7.3□□□□□ -1.24
CHD9-217ENST00000565832 SLURP2P0DP57 97 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 DPEP1P16444 411 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 NCLP19338 710 aaKnown RBP7.3□□□□□ -1.24
CHD9-217ENST00000565832 CDC27P30260 824 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 DEKP35659 375 aaKnown RBP7.3□□□□□ -1.24
CHD9-217ENST00000565832 BTDP43251 543 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 EVCP57679 992 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 DNM1Q05193 864 aaKnown RBP7.3□□□□□ -1.24
CHD9-217ENST00000565832 AOC3Q16853 763 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 PPP2R2DQ66LE6 453 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms