RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 GPR161Q8N6U8 529 aaKnown RBP7.85□□□□□ -1.15
UBFD1-204ENST00000565634 GRAPLQ8TC17 118 aaPredicted RBP7.85□□□□□ -1.15
UBFD1-204ENST00000565634 CCDC97Q96F63 343 aaPredicted RBP7.85□□□□□ -1.15
UBFD1-204ENST00000565634 WNK4Q96J92 1243 aa7.85□□□□□ -1.15
UBFD1-204ENST00000565634 PHAXQ9H814 394 aaKnown RBP7.85□□□□□ -1.15
UBFD1-204ENST00000565634 STXBP5LQ9Y2K9 1186 aa7.85□□□□□ -1.15
UBFD1-204ENST00000565634 PRUNE2Q8WUY3 3088 aa7.84□□□□□ -1.15
UBFD1-204ENST00000565634 MANSC4A6NHS7 340 aaPredicted RBP7.84□□□□□ -1.15
UBFD1-204ENST00000565634 USP17L8P0C7I0 530 aa7.84□□□□□ -1.15
UBFD1-204ENST00000565634 ZNF280AP59817 542 aaPredicted RBP7.84□□□□□ -1.15
UBFD1-204ENST00000565634 AIMP1Q12904 312 aaKnown RBP7.84□□□□□ -1.15
UBFD1-204ENST00000565634 TWISTNBQ3B726 338 aaPredicted RBP7.84□□□□□ -1.15
UBFD1-204ENST00000565634 LDLRAD1Q5T700 205 aa7.84□□□□□ -1.15
UBFD1-204ENST00000565634 PDXDC2PQ6P474 469 aa7.84□□□□□ -1.15
UBFD1-204ENST00000565634 Q6ZVU0 165 aa7.84□□□□□ -1.15
UBFD1-204ENST00000565634 TBC1D16Q8TBP0 767 aa7.84□□□□□ -1.15
UBFD1-204ENST00000565634 SSH1Q8WYL5 1049 aa7.84□□□□□ -1.15
UBFD1-204ENST00000565634 OCSTAMPQ9BR26 566 aa7.84□□□□□ -1.15
UBFD1-204ENST00000565634 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.84□□□□□ -1.15
UBFD1-204ENST00000565634 ZC3H12CQ9C0D7 883 aaKnown RBP7.84□□□□□ -1.15
UBFD1-204ENST00000565634 BABAM1Q9NWV8 329 aa7.84□□□□□ -1.15
UBFD1-204ENST00000565634 FKBPLQ9UIM3 349 aa7.84□□□□□ -1.15
UBFD1-204ENST00000565634 ZMYND8Q9ULU4 1186 aaPredicted RBP7.84□□□□□ -1.15
UBFD1-204ENST00000565634 PCDHAC2Q9Y5I4 1007 aa7.84□□□□□ -1.15
UBFD1-204ENST00000565634 PSME4Q14997 1843 aa7.84□□□□□ -1.15
UBFD1-204ENST00000565634 ZNF609O15014 1411 aa7.84□□□□□ -1.15
UBFD1-204ENST00000565634 TCF20Q9UGU0 1960 aaKnown RBP7.83□□□□□ -1.16
UBFD1-204ENST00000565634 FIGNL2A6NMB9 653 aa7.83□□□□□ -1.16
UBFD1-204ENST00000565634 TTLL8A6PVC2 850 aa7.83□□□□□ -1.16
UBFD1-204ENST00000565634 PLIN1O60240 522 aa7.83□□□□□ -1.16
UBFD1-204ENST00000565634 SYN1P17600 705 aa7.83□□□□□ -1.16
UBFD1-204ENST00000565634 NF2P35240 595 aa7.83□□□□□ -1.16
UBFD1-204ENST00000565634 KRT76Q01546 638 aa7.83□□□□□ -1.16
UBFD1-204ENST00000565634 NR6A1Q15406 480 aa7.83□□□□□ -1.16
UBFD1-204ENST00000565634 ARHGAP9Q9BRR9 750 aa7.83□□□□□ -1.16
UBFD1-204ENST00000565634 TRAIPQ9BWF2 469 aa7.83□□□□□ -1.16
UBFD1-204ENST00000565634 MYH16Q9H6N6 1097 aa7.83□□□□□ -1.16
UBFD1-204ENST00000565634 CHPF2Q9P2E5 772 aa7.83□□□□□ -1.16
UBFD1-204ENST00000565634 TRMT112Q9UI30 125 aaKnown RBP7.83□□□□□ -1.16
UBFD1-204ENST00000565634 NR2E3Q9Y5X4 410 aa7.83□□□□□ -1.16
UBFD1-204ENST00000565634 EYSQ5T1H1 3165 aa7.82□□□□□ -1.16
UBFD1-204ENST00000565634 WNT10BO00744 389 aa7.82□□□□□ -1.16
UBFD1-204ENST00000565634 RAD21O60216 631 aa7.82□□□□□ -1.16
UBFD1-204ENST00000565634 CTGFP29279 349 aa7.82□□□□□ -1.16
UBFD1-204ENST00000565634 RARSP54136 660 aaKnown RBP7.82□□□□□ -1.16
UBFD1-204ENST00000565634 CALD1Q05682 793 aaKnown RBP7.82□□□□□ -1.16
UBFD1-204ENST00000565634 KCTD17Q8N5Z5 321 aa7.82□□□□□ -1.16
UBFD1-204ENST00000565634 RETREG2Q8NC44 543 aa7.82□□□□□ -1.16
UBFD1-204ENST00000565634 KCTD15Q96SI1 283 aaPredicted RBP7.82□□□□□ -1.16
UBFD1-204ENST00000565634 GMLQ99445 158 aa7.82□□□□□ -1.16
UBFD1-204ENST00000565634 SERPINA10Q9UK55 444 aa7.82□□□□□ -1.16
UBFD1-204ENST00000565634 DDX60Q8IY21 1712 aaKnown RBP7.81□□□□□ -1.16
UBFD1-204ENST00000565634 UFL1O94874 794 aa7.81□□□□□ -1.16
UBFD1-204ENST00000565634 INHBEP58166 350 aa7.81□□□□□ -1.16
UBFD1-204ENST00000565634 PTSQ03393 145 aa7.81□□□□□ -1.16
UBFD1-204ENST00000565634 TAF1CQ15572 869 aaPredicted RBP7.81□□□□□ -1.16
UBFD1-204ENST00000565634 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.81□□□□□ -1.16
UBFD1-204ENST00000565634 HDGFL1Q5TGJ6 251 aa7.81□□□□□ -1.16
UBFD1-204ENST00000565634 JARID2Q92833 1246 aaPredicted RBP7.81□□□□□ -1.16
UBFD1-204ENST00000565634 CCDC85AQ96PX6 553 aaPredicted RBP7.81□□□□□ -1.16
UBFD1-204ENST00000565634 HTATIP2Q9BUP3 242 aa7.81□□□□□ -1.16
UBFD1-204ENST00000565634 RNF208Q9H0X6 261 aa7.81□□□□□ -1.16
UBFD1-204ENST00000565634 ELP3Q9H9T3 547 aa7.81□□□□□ -1.16
UBFD1-204ENST00000565634 SEC31BQ9NQW1 1179 aa7.81□□□□□ -1.16
UBFD1-204ENST00000565634 BIN2Q9UBW5 565 aaPredicted RBP7.81□□□□□ -1.16
UBFD1-204ENST00000565634 LRRC37AA6NMS7 1700 aa7.81□□□□□ -1.16
UBFD1-204ENST00000565634 CACNA1FO60840 1977 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 F6X3S4 739 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 SPINT1O43278 529 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 CCL5P13501 91 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 RFC5P40937 340 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 NBPF12Q5TAG4 269 aaPredicted RBP7.8□□□□□ -1.16
UBFD1-204ENST00000565634 C20orf194Q5TEA3 1177 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 PPP2R2DQ66LE6 453 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 COPS6Q7L5N1 327 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 PODNQ7Z5L7 613 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 UBE2Q1Q7Z7E8 422 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 NLRP10Q86W26 655 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 FAM43AQ8N2R8 423 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 AGBL3Q8NEM8 1001 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 XAGE3Q8WTP9 111 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 FAM89AQ96GI7 184 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 AGBL1Q96MI9 1066 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 GUCD1Q96NT3 240 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 EYA3Q99504 573 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 PGPEP1Q9NXJ5 209 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 ANKIB1Q9P2G1 1089 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 NOB1Q9ULX3 412 aaKnown RBP7.8□□□□□ -1.16
UBFD1-204ENST00000565634 MGAMO43451 1857 aa7.8□□□□□ -1.16
UBFD1-204ENST00000565634 ZNF646O15015 1829 aaPredicted RBP7.8□□□□□ -1.16
UBFD1-204ENST00000565634 AOX1Q06278 1338 aa7.79□□□□□ -1.16
UBFD1-204ENST00000565634 USP17L3A6NCW0 530 aa7.79□□□□□ -1.16
UBFD1-204ENST00000565634 USP17L4A6NCW7 530 aa7.79□□□□□ -1.16
UBFD1-204ENST00000565634 ATP5J2-PTCD1G3V325 749 aa7.79□□□□□ -1.16
UBFD1-204ENST00000565634 USP2O75604 605 aaPredicted RBP7.79□□□□□ -1.16
UBFD1-204ENST00000565634 FARP2O94887 1054 aaPredicted RBP7.79□□□□□ -1.16
UBFD1-204ENST00000565634 RLBP1P12271 317 aa7.79□□□□□ -1.16
UBFD1-204ENST00000565634 PARP10Q53GL7 1025 aa7.79□□□□□ -1.16
UBFD1-204ENST00000565634 OTUD7BQ6GQQ9 843 aa7.79□□□□□ -1.16
UBFD1-204ENST00000565634 USP17L1Q7RTZ2 530 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms