RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 MIGA1Q8NAN2 632 aa15.86■□□□□ 0.13
SF3B3-202ENST00000562722 PAWRQ96IZ0 340 aaKnown RBP15.86■□□□□ 0.13
SF3B3-202ENST00000562722 ZNF512BQ96KM6 892 aaPredicted RBP15.86■□□□□ 0.13
SF3B3-202ENST00000562722 DNAJC18Q9H819 358 aa15.86■□□□□ 0.13
SF3B3-202ENST00000562722 TLR7Q9NYK1 1049 aaKnown RBP15.86■□□□□ 0.13
SF3B3-202ENST00000562722 DBNLQ9UJU6 430 aaKnown RBP15.86■□□□□ 0.13
SF3B3-202ENST00000562722 ZBTB21Q9ULJ3 1066 aa15.86■□□□□ 0.13
SF3B3-202ENST00000562722 CEP290O15078 2479 aa15.86■□□□□ 0.13
SF3B3-202ENST00000562722 CYP2B6P20813 491 aa15.85■□□□□ 0.13
SF3B3-202ENST00000562722 USP5P45974 858 aa15.85■□□□□ 0.13
SF3B3-202ENST00000562722 JAG1P78504 1218 aa15.85■□□□□ 0.13
SF3B3-202ENST00000562722 PDE3AQ14432 1141 aa15.85■□□□□ 0.13
SF3B3-202ENST00000562722 SHROOM1Q2M3G4 852 aaPredicted RBP15.85■□□□□ 0.13
SF3B3-202ENST00000562722 NECAB2Q7Z6G3 386 aa15.85■□□□□ 0.13
SF3B3-202ENST00000562722 GPRC5AQ8NFJ5 357 aa15.85■□□□□ 0.13
SF3B3-202ENST00000562722 P2RX7Q99572 595 aaKnown RBP15.85■□□□□ 0.13
SF3B3-202ENST00000562722 CRISPLD2Q9H0B8 497 aa15.85■□□□□ 0.13
SF3B3-202ENST00000562722 CWC22Q9HCG8 908 aaKnown RBP15.85■□□□□ 0.13
SF3B3-202ENST00000562722 HMX1Q9NP08 348 aaPredicted RBP15.85■□□□□ 0.13
SF3B3-202ENST00000562722 MORF4L1Q9UBU8 362 aa15.85■□□□□ 0.13
SF3B3-202ENST00000562722 PEX10O60683 326 aa15.84■□□□□ 0.13
SF3B3-202ENST00000562722 IGSF3O75054 1194 aa15.84■□□□□ 0.13
SF3B3-202ENST00000562722 HOXA7P31268 230 aaPredicted RBP15.84■□□□□ 0.13
SF3B3-202ENST00000562722 HERVK_113P62684 666 aa15.84■□□□□ 0.13
SF3B3-202ENST00000562722 TRIM32Q13049 653 aa15.84■□□□□ 0.13
SF3B3-202ENST00000562722 MAGEB6Q8N7X4 407 aa15.84■□□□□ 0.13
SF3B3-202ENST00000562722 DIS3LQ8TF46 1054 aaKnown RBP15.84■□□□□ 0.13
SF3B3-202ENST00000562722 FEZ1Q99689 392 aa15.84■□□□□ 0.13
SF3B3-202ENST00000562722 PAGR1Q9BTK6 254 aa15.84■□□□□ 0.13
SF3B3-202ENST00000562722 GINM1Q9NU53 330 aa15.84■□□□□ 0.13
SF3B3-202ENST00000562722 GJD2Q9UKL4 321 aa15.84■□□□□ 0.13
SF3B3-202ENST00000562722 NOP58Q9Y2X3 529 aaKnown RBP15.84■□□□□ 0.13
SF3B3-202ENST00000562722 RPTORQ8N122 1335 aa15.84■□□□□ 0.13
SF3B3-202ENST00000562722 TRIOBPQ9H2D6 2365 aa15.83■□□□□ 0.12
SF3B3-202ENST00000562722 SIPA1L1O43166 1804 aa15.83■□□□□ 0.12
SF3B3-202ENST00000562722 GH2P01242 217 aa15.83■□□□□ 0.12
SF3B3-202ENST00000562722 ZYXQ15942 572 aaKnown RBP15.83■□□□□ 0.12
SF3B3-202ENST00000562722 METTL16Q86W50 562 aaKnown RBP15.83■□□□□ 0.12
SF3B3-202ENST00000562722 CERS3Q8IU89 383 aa15.83■□□□□ 0.12
SF3B3-202ENST00000562722 SOCS4Q8WXH5 440 aa15.83■□□□□ 0.12
SF3B3-202ENST00000562722 EAF2Q96CJ1 260 aaPredicted RBP15.83■□□□□ 0.12
SF3B3-202ENST00000562722 NUDT12Q9BQG2 462 aa15.83■□□□□ 0.12
SF3B3-202ENST00000562722 TXNRD2Q9NNW7 524 aa15.83■□□□□ 0.12
SF3B3-202ENST00000562722 NDUFB9Q9Y6M9 179 aa15.83■□□□□ 0.12
SF3B3-202ENST00000562722 RLBP1P12271 317 aa15.82■□□□□ 0.12
SF3B3-202ENST00000562722 MAPK4P31152 587 aa15.82■□□□□ 0.12
SF3B3-202ENST00000562722 MAP3K12Q12852 859 aa15.82■□□□□ 0.12
SF3B3-202ENST00000562722 USP17L2Q6R6M4 530 aa15.82■□□□□ 0.12
SF3B3-202ENST00000562722 AACSQ86V21 672 aa15.82■□□□□ 0.12
SF3B3-202ENST00000562722 C7orf61Q8IZ16 206 aa15.82■□□□□ 0.12
SF3B3-202ENST00000562722 ANKLE1Q8NAG6 615 aa15.82■□□□□ 0.12
SF3B3-202ENST00000562722 GTF3C2Q8WUA4 911 aaPredicted RBP15.82■□□□□ 0.12
SF3B3-202ENST00000562722 TRIB2Q92519 343 aa15.82■□□□□ 0.12
SF3B3-202ENST00000562722 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
SF3B3-202ENST00000562722 ZKSCAN1P17029 563 aaPredicted RBP15.81■□□□□ 0.12
SF3B3-202ENST00000562722 ERVK-9P63128 1117 aa15.81■□□□□ 0.12
SF3B3-202ENST00000562722 ERVK-24P63145 666 aa15.81■□□□□ 0.12
SF3B3-202ENST00000562722 RAB3GAP1Q15042 981 aa15.81■□□□□ 0.12
SF3B3-202ENST00000562722 ERC1Q8IUD2 1116 aa15.81■□□□□ 0.12
SF3B3-202ENST00000562722 NBPF3Q9H094 633 aa15.81■□□□□ 0.12
SF3B3-202ENST00000562722 EMILIN3Q9NT22 766 aa15.81■□□□□ 0.12
SF3B3-202ENST00000562722 STAP2Q9UGK3 403 aa15.81■□□□□ 0.12
SF3B3-202ENST00000562722 SERPINB13Q9UIV8 391 aa15.81■□□□□ 0.12
SF3B3-202ENST00000562722 EXOC6BQ9Y2D4 811 aa15.81■□□□□ 0.12
SF3B3-202ENST00000562722 WDR78Q5VTH9 848 aa15.8■□□□□ 0.12
SF3B3-202ENST00000562722 CEP85Q6P2H3 762 aa15.8■□□□□ 0.12
SF3B3-202ENST00000562722 TTC6Q86TZ1 520 aa15.8■□□□□ 0.12
SF3B3-202ENST00000562722 BCL11AQ9H165 835 aa15.8■□□□□ 0.12
SF3B3-202ENST00000562722 C11orf49Q9H6J7 331 aa15.8■□□□□ 0.12
SF3B3-202ENST00000562722 ANTXR1Q9H6X2 564 aa15.8■□□□□ 0.12
SF3B3-202ENST00000562722 RBPJLQ9UBG7 517 aa15.8■□□□□ 0.12
SF3B3-202ENST00000562722 DOCK3Q8IZD9 2030 aa15.79■□□□□ 0.12
SF3B3-202ENST00000562722 XRCC5P13010 732 aaKnown RBP15.79■□□□□ 0.12
SF3B3-202ENST00000562722 RGS2P41220 211 aa15.79■□□□□ 0.12
SF3B3-202ENST00000562722 ABCB5Q2M3G0 1257 aa15.79■□□□□ 0.12
SF3B3-202ENST00000562722 Q3C1V9 767 aa15.79■□□□□ 0.12
SF3B3-202ENST00000562722 CERKLQ49MI3 558 aaPredicted RBP15.79■□□□□ 0.12
SF3B3-202ENST00000562722 GPR142Q7Z601 462 aa15.79■□□□□ 0.12
SF3B3-202ENST00000562722 PLEKHH3Q7Z736 793 aa15.79■□□□□ 0.12
SF3B3-202ENST00000562722 TRMT44Q8IYL2 757 aaKnown RBP15.79■□□□□ 0.12
SF3B3-202ENST00000562722 PORCNQ9H237 461 aa15.79■□□□□ 0.12
SF3B3-202ENST00000562722 PRO3102Q9H379 93 aa15.79■□□□□ 0.12
SF3B3-202ENST00000562722 CABP5Q9NP86 173 aa15.79■□□□□ 0.12
SF3B3-202ENST00000562722 ZMYND8Q9ULU4 1186 aaPredicted RBP15.79■□□□□ 0.12
SF3B3-202ENST00000562722 CDK5RAP2Q96SN8 1893 aa15.79■□□□□ 0.12
SF3B3-202ENST00000562722 FOCADQ5VW36 1801 aa15.79■□□□□ 0.12
SF3B3-202ENST00000562722 A0A1W2PPC1 479 aa15.78■□□□□ 0.12
SF3B3-202ENST00000562722 USP17L15C9J2P7 530 aa15.78■□□□□ 0.12
SF3B3-202ENST00000562722 USP17L13C9JLJ4 530 aa15.78■□□□□ 0.12
SF3B3-202ENST00000562722 USP17L11C9JVI0 530 aa15.78■□□□□ 0.12
SF3B3-202ENST00000562722 USP17L18D6R9N7 530 aa15.78■□□□□ 0.12
SF3B3-202ENST00000562722 USP17L22D6RA61 530 aa15.78■□□□□ 0.12
SF3B3-202ENST00000562722 USP17L17D6RBQ6 530 aa15.78■□□□□ 0.12
SF3B3-202ENST00000562722 USP17L19D6RCP7 530 aa15.78■□□□□ 0.12
SF3B3-202ENST00000562722 USP17L20D6RJB6 530 aa15.78■□□□□ 0.12
SF3B3-202ENST00000562722 APBB1O00213 710 aa15.78■□□□□ 0.12
SF3B3-202ENST00000562722 POLR3DP05423 398 aaPredicted RBP15.78■□□□□ 0.12
SF3B3-202ENST00000562722 USP14P54578 494 aa15.78■□□□□ 0.12
SF3B3-202ENST00000562722 USP17L24Q0WX57 530 aa15.78■□□□□ 0.12
SF3B3-202ENST00000562722 TATDN1Q6P1N9 297 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms