RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 FCGRTP55899 365 aa21.49■■□□□ 1.03
CMTM3-204ENST00000562357 MTMR2Q13614 643 aa21.49■■□□□ 1.03
CMTM3-204ENST00000562357 LRRFIP1Q32MZ4 808 aaKnown RBP21.49■■□□□ 1.03
CMTM3-204ENST00000562357 SLC9C1Q4G0N8 1177 aa21.49■■□□□ 1.03
CMTM3-204ENST00000562357 ARMT1Q9H993 441 aa21.49■■□□□ 1.03
CMTM3-204ENST00000562357 CABP5Q9NP86 173 aa21.49■■□□□ 1.03
CMTM3-204ENST00000562357 C19orf81C9J6K1 198 aa21.48■■□□□ 1.03
CMTM3-204ENST00000562357 USP17L10C9JJH3 530 aa21.48■■□□□ 1.03
CMTM3-204ENST00000562357 ERC2O15083 957 aa21.48■■□□□ 1.03
CMTM3-204ENST00000562357 GH2P01242 217 aa21.48■■□□□ 1.03
CMTM3-204ENST00000562357 BACE1P56817 501 aa21.48■■□□□ 1.03
CMTM3-204ENST00000562357 AAMPQ13685 434 aa21.48■■□□□ 1.03
CMTM3-204ENST00000562357 CERKLQ49MI3 558 aaPredicted RBP21.48■■□□□ 1.03
CMTM3-204ENST00000562357 SH3D19Q5HYK7 790 aa21.48■■□□□ 1.03
CMTM3-204ENST00000562357 TREML2Q5T2D2 321 aa21.48■■□□□ 1.03
CMTM3-204ENST00000562357 SDR42E1Q8WUS8 393 aa21.48■■□□□ 1.03
CMTM3-204ENST00000562357 FEZ1Q99689 392 aa21.48■■□□□ 1.03
CMTM3-204ENST00000562357 ARHGAP39Q9C0H5 1083 aa21.48■■□□□ 1.03
CMTM3-204ENST00000562357 ATP8A2Q9NTI2 1148 aa21.48■■□□□ 1.03
CMTM3-204ENST00000562357 PTCH2Q9Y6C5 1203 aa21.48■■□□□ 1.03
CMTM3-204ENST00000562357 SIPA1L1O43166 1804 aa21.48■■□□□ 1.03
CMTM3-204ENST00000562357 BCRP11274 1271 aa21.47■■□□□ 1.03
CMTM3-204ENST00000562357 IRX3P78415 501 aaPredicted RBP21.47■■□□□ 1.03
CMTM3-204ENST00000562357 TATDN1Q6P1N9 297 aa21.47■■□□□ 1.03
CMTM3-204ENST00000562357 ARMC5Q96C12 935 aa21.47■■□□□ 1.03
CMTM3-204ENST00000562357 DCP1AQ9NPI6 582 aaPredicted RBP21.47■■□□□ 1.03
CMTM3-204ENST00000562357 ATAD5Q96QE3 1844 aa21.47■■□□□ 1.03
CMTM3-204ENST00000562357 TTC41PQ6P2S7 1318 aa21.47■■□□□ 1.03
CMTM3-204ENST00000562357 MYH1P12882 1939 aa21.47■■□□□ 1.03
CMTM3-204ENST00000562357 PHIPQ8WWQ0 1821 aa21.46■■□□□ 1.03
CMTM3-204ENST00000562357 PLCD1P51178 756 aa21.46■■□□□ 1.03
CMTM3-204ENST00000562357 CAP1Q01518 475 aa21.46■■□□□ 1.03
CMTM3-204ENST00000562357 ABCB5Q2M3G0 1257 aa21.46■■□□□ 1.03
CMTM3-204ENST00000562357 KBTBD3Q8NAB2 608 aa21.46■■□□□ 1.03
CMTM3-204ENST00000562357 TAOK2Q9UL54 1235 aa21.46■■□□□ 1.03
CMTM3-204ENST00000562357 ZFYP08048 801 aaPredicted RBP21.45■■□□□ 1.02
CMTM3-204ENST00000562357 GCLCP48506 637 aaPredicted RBP21.45■■□□□ 1.02
CMTM3-204ENST00000562357 RAB3GAP1Q15042 981 aa21.45■■□□□ 1.02
CMTM3-204ENST00000562357 TSHZ3Q63HK5 1081 aa21.45■■□□□ 1.02
CMTM3-204ENST00000562357 RAET1EQ8TD07 263 aa21.45■■□□□ 1.02
CMTM3-204ENST00000562357 GCC1Q96CN9 775 aa21.45■■□□□ 1.02
CMTM3-204ENST00000562357 TRIM47Q96LD4 638 aa21.45■■□□□ 1.02
CMTM3-204ENST00000562357 SRRDQ9UH36 339 aa21.45■■□□□ 1.02
CMTM3-204ENST00000562357 SLC4A4Q9Y6R1 1079 aa21.45■■□□□ 1.02
CMTM3-204ENST00000562357 MYPNQ86TC9 1320 aa21.45■■□□□ 1.02
CMTM3-204ENST00000562357 PTPRFP10586 1907 aa21.45■■□□□ 1.02
CMTM3-204ENST00000562357 NAV1Q8NEY1 1877 aa21.44■■□□□ 1.02
CMTM3-204ENST00000562357 GLRX3O76003 335 aaKnown RBP21.44■■□□□ 1.02
CMTM3-204ENST00000562357 JAG1P78504 1218 aa21.44■■□□□ 1.02
CMTM3-204ENST00000562357 ANKRD13CQ8N6S4 541 aa21.44■■□□□ 1.02
CMTM3-204ENST00000562357 TMEM106CQ9BVX2 250 aa21.44■■□□□ 1.02
CMTM3-204ENST00000562357 SWAP70Q9UH65 585 aa21.44■■□□□ 1.02
CMTM3-204ENST00000562357 MPHOSPH10O00566 681 aaKnown RBP21.43■■□□□ 1.02
CMTM3-204ENST00000562357 SHMT1P34896 483 aa21.43■■□□□ 1.02
CMTM3-204ENST00000562357 FAM110CQ1W6H9 321 aa21.43■■□□□ 1.02
CMTM3-204ENST00000562357 SLFNL1Q499Z3 407 aa21.43■■□□□ 1.02
CMTM3-204ENST00000562357 USP17L2Q6R6M4 530 aa21.43■■□□□ 1.02
CMTM3-204ENST00000562357 ASCC2Q9H1I8 757 aaPredicted RBP21.43■■□□□ 1.02
CMTM3-204ENST00000562357 LOC285556D6RIA3 1793 aa21.42■■□□□ 1.02
CMTM3-204ENST00000562357 TNPO2O14787 897 aaKnown RBP21.42■■□□□ 1.02
CMTM3-204ENST00000562357 PRKAB2O43741 272 aa21.42■■□□□ 1.02
CMTM3-204ENST00000562357 MX1P20591 662 aa21.42■■□□□ 1.02
CMTM3-204ENST00000562357 USP14P54578 494 aa21.42■■□□□ 1.02
CMTM3-204ENST00000562357 GABPAQ06546 454 aa21.42■■□□□ 1.02
CMTM3-204ENST00000562357 HDAC1Q13547 482 aaPredicted RBP21.42■■□□□ 1.02
CMTM3-204ENST00000562357 SHROOM1Q2M3G4 852 aaPredicted RBP21.42■■□□□ 1.02
CMTM3-204ENST00000562357 ANKRD45Q5TZF3 282 aa21.42■■□□□ 1.02
CMTM3-204ENST00000562357 APPBP2Q92624 585 aa21.42■■□□□ 1.02
CMTM3-204ENST00000562357 ZNF333Q96JL9 665 aa21.42■■□□□ 1.02
CMTM3-204ENST00000562357 RNF113AO15541 343 aaKnown RBP21.41■■□□□ 1.02
CMTM3-204ENST00000562357 COA7Q96BR5 231 aa21.41■■□□□ 1.02
CMTM3-204ENST00000562357 PUS7LQ9H0K6 701 aaKnown RBP21.41■■□□□ 1.02
CMTM3-204ENST00000562357 DDX60LQ5H9U9 1706 aaKnown RBP21.41■■□□□ 1.02
CMTM3-204ENST00000562357 CYP2D6P10635 497 aa21.4■■□□□ 1.02
CMTM3-204ENST00000562357 CTGFP29279 349 aa21.4■■□□□ 1.02
CMTM3-204ENST00000562357 HOXA7P31268 230 aaPredicted RBP21.4■■□□□ 1.02
CMTM3-204ENST00000562357 ZYXQ15942 572 aaKnown RBP21.4■■□□□ 1.02
CMTM3-204ENST00000562357 GTF3C2Q8WUA4 911 aaPredicted RBP21.4■■□□□ 1.02
CMTM3-204ENST00000562357 FSD1Q9BTV5 496 aa21.4■■□□□ 1.02
CMTM3-204ENST00000562357 ARPP21Q9UBL0 812 aaPredicted RBP21.4■■□□□ 1.02
CMTM3-204ENST00000562357 USP17L12C9JPN9 530 aa21.39■■□□□ 1.01
CMTM3-204ENST00000562357 USP17L21D6R901 530 aa21.39■■□□□ 1.01
CMTM3-204ENST00000562357 CHGBP05060 677 aa21.39■■□□□ 1.01
CMTM3-204ENST00000562357 PRKCZQ05513 592 aa21.39■■□□□ 1.01
CMTM3-204ENST00000562357 SH3TC2Q8TF17 1288 aa21.39■■□□□ 1.01
CMTM3-204ENST00000562357 KIAA1683Q9H0B3 1180 aa21.39■■□□□ 1.01
CMTM3-204ENST00000562357 RWDD1Q9H446 243 aaPredicted RBP21.39■■□□□ 1.01
CMTM3-204ENST00000562357 MYH7P12883 1935 aa21.38■■□□□ 1.01
CMTM3-204ENST00000562357 GNAT2P19087 354 aa21.38■■□□□ 1.01
CMTM3-204ENST00000562357 GRK4P32298 578 aa21.38■■□□□ 1.01
CMTM3-204ENST00000562357 C12orf60Q5U649 245 aa21.38■■□□□ 1.01
CMTM3-204ENST00000562357 TMEM179Q6ZVK1 233 aa21.38■■□□□ 1.01
CMTM3-204ENST00000562357 PI4K2BQ8TCG2 481 aa21.38■■□□□ 1.01
CMTM3-204ENST00000562357 C12orf42Q96LP6 360 aa21.38■■□□□ 1.01
CMTM3-204ENST00000562357 CCDC17Q96LX7 622 aa21.38■■□□□ 1.01
CMTM3-204ENST00000562357 EMILIN3Q9NT22 766 aa21.38■■□□□ 1.01
CMTM3-204ENST00000562357 BIN2Q9UBW5 565 aaPredicted RBP21.38■■□□□ 1.01
CMTM3-204ENST00000562357 ZSWIM8A7E2V4 1837 aa21.37■■□□□ 1.01
CMTM3-204ENST00000562357 MYCP01106 439 aaPredicted RBP21.37■■□□□ 1.01
CMTM3-204ENST00000562357 HERVK_113P62684 666 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms