RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 HTR3BO95264 441 aa7.83□□□□□ -1.16
USP8-218ENST00000561330 TMEM201Q5SNT2 666 aa7.83□□□□□ -1.16
USP8-218ENST00000561330 SLC6A19Q695T7 634 aa7.83□□□□□ -1.16
USP8-218ENST00000561330 INTS5Q6P9B9 1019 aaKnown RBP7.83□□□□□ -1.16
USP8-218ENST00000561330 MCATQ8IVS2 390 aaKnown RBP7.83□□□□□ -1.16
USP8-218ENST00000561330 MFSD2AQ8NA29 543 aa7.83□□□□□ -1.16
USP8-218ENST00000561330 NKD1Q969G9 470 aa7.83□□□□□ -1.16
USP8-218ENST00000561330 TMEM87BQ96K49 555 aa7.83□□□□□ -1.16
USP8-218ENST00000561330 CYP26A1O43174 497 aa7.82□□□□□ -1.16
USP8-218ENST00000561330 FOSL1P15407 271 aa7.82□□□□□ -1.16
USP8-218ENST00000561330 MCM4P33991 863 aa7.82□□□□□ -1.16
USP8-218ENST00000561330 MLECQ14165 292 aa7.82□□□□□ -1.16
USP8-218ENST00000561330 PRAMEF13Q5VWM6 474 aa7.82□□□□□ -1.16
USP8-218ENST00000561330 SLITRK4Q8IW52 837 aa7.82□□□□□ -1.16
USP8-218ENST00000561330 ACSF2Q96CM8 615 aaPredicted RBP7.82□□□□□ -1.16
USP8-218ENST00000561330 LRRC4CQ9HCJ2 640 aa7.82□□□□□ -1.16
USP8-218ENST00000561330 REV1Q9UBZ9 1251 aa7.82□□□□□ -1.16
USP8-218ENST00000561330 PCDHB14Q9Y5E9 798 aa7.82□□□□□ -1.16
USP8-218ENST00000561330 ZNF165P49910 485 aa7.81□□□□□ -1.16
USP8-218ENST00000561330 YARSP54577 528 aaKnown RBP7.81□□□□□ -1.16
USP8-218ENST00000561330 XAGE3Q8WTP9 111 aa7.81□□□□□ -1.16
USP8-218ENST00000561330 MIPEPQ99797 713 aa7.81□□□□□ -1.16
USP8-218ENST00000561330 DPH2Q9BQC3 489 aaPredicted RBP7.81□□□□□ -1.16
USP8-218ENST00000561330 TGIF2Q9GZN2 237 aa7.81□□□□□ -1.16
USP8-218ENST00000561330 CCSER2Q9H7U1 834 aa7.81□□□□□ -1.16
USP8-218ENST00000561330 SCO2A0A1W2PP80 73 aa7.8□□□□□ -1.16
USP8-218ENST00000561330 SLITRK5O94991 958 aa7.8□□□□□ -1.16
USP8-218ENST00000561330 ATE1O95260 518 aa7.8□□□□□ -1.16
USP8-218ENST00000561330 SSTR4P31391 388 aa7.8□□□□□ -1.16
USP8-218ENST00000561330 PAK2Q13177 524 aa7.8□□□□□ -1.16
USP8-218ENST00000561330 REXO1Q8N1G1 1221 aaKnown RBP7.8□□□□□ -1.16
USP8-218ENST00000561330 FAM13CQ8NE31 585 aa7.8□□□□□ -1.16
USP8-218ENST00000561330 EHMT1Q9H9B1 1298 aa7.8□□□□□ -1.16
USP8-218ENST00000561330 KLHL3Q9UH77 587 aa7.8□□□□□ -1.16
USP8-218ENST00000561330 ERCC5P28715 1186 aaPredicted RBP7.79□□□□□ -1.16
USP8-218ENST00000561330 RAD51AP2Q09MP3 1159 aa7.79□□□□□ -1.16
USP8-218ENST00000561330 LETMD1Q6P1Q0 360 aa7.79□□□□□ -1.16
USP8-218ENST00000561330 GK5Q6ZS86 529 aa7.79□□□□□ -1.16
USP8-218ENST00000561330 GTF2IRD1Q9UHL9 959 aa7.79□□□□□ -1.16
USP8-218ENST00000561330 UPK3BL1B0FP48 263 aa7.78□□□□□ -1.16
USP8-218ENST00000561330 UPK3BL2E5RIL1 263 aa7.78□□□□□ -1.16
USP8-218ENST00000561330 EOMESO95936 686 aa7.78□□□□□ -1.16
USP8-218ENST00000561330 HOXA10P31260 410 aaPredicted RBP7.78□□□□□ -1.16
USP8-218ENST00000561330 CD97P48960 835 aa7.78□□□□□ -1.16
USP8-218ENST00000561330 LRP8Q14114 963 aa7.78□□□□□ -1.16
USP8-218ENST00000561330 ARHGAP27Q6ZUM4 889 aa7.78□□□□□ -1.16
USP8-218ENST00000561330 SPATA32Q96LK8 384 aa7.78□□□□□ -1.16
USP8-218ENST00000561330 PRDM5Q9NQX1 630 aaPredicted RBP7.78□□□□□ -1.16
USP8-218ENST00000561330 TPX2Q9ULW0 747 aaKnown RBP7.78□□□□□ -1.16
USP8-218ENST00000561330 CHURC1-FNTBB4DL54 471 aa7.77□□□□□ -1.17
USP8-218ENST00000561330 IGF2BP3O00425 579 aaKnown RBP eCLIP7.77□□□□□ -1.17
USP8-218ENST00000561330 MED26O95402 600 aa7.77□□□□□ -1.17
USP8-218ENST00000561330 CLCQ05315 142 aa7.77□□□□□ -1.17
USP8-218ENST00000561330 ZNF746Q6NUN9 644 aaPredicted RBP7.77□□□□□ -1.17
USP8-218ENST00000561330 FAM214BQ7L5A3 538 aa7.77□□□□□ -1.17
USP8-218ENST00000561330 SLFN12Q8IYM2 578 aa7.77□□□□□ -1.17
USP8-218ENST00000561330 FAM181AQ8N9Y4 354 aa7.77□□□□□ -1.17
USP8-218ENST00000561330 CYB5D2Q8WUJ1 264 aa7.77□□□□□ -1.17
USP8-218ENST00000561330 GPRASP2Q96D09 838 aa7.77□□□□□ -1.17
USP8-218ENST00000561330 HEXIM2Q96MH2 286 aaKnown RBP7.77□□□□□ -1.17
USP8-218ENST00000561330 ACBD3Q9H3P7 528 aa7.77□□□□□ -1.17
USP8-218ENST00000561330 PCMTD2Q9NV79 361 aa7.77□□□□□ -1.17
USP8-218ENST00000561330 LRRFIP1Q32MZ4 808 aaKnown RBP7.76□□□□□ -1.17
USP8-218ENST00000561330 RIN3Q8TB24 985 aa7.76□□□□□ -1.17
USP8-218ENST00000561330 MKNK2Q9HBH9 465 aa7.76□□□□□ -1.17
USP8-218ENST00000561330 GMIPQ9P107 970 aa7.76□□□□□ -1.17
USP8-218ENST00000561330 ZC3H7BQ9UGR2 993 aaKnown RBP7.76□□□□□ -1.17
USP8-218ENST00000561330 INPP5FQ9Y2H2 1132 aa7.76□□□□□ -1.17
USP8-218ENST00000561330 SLC22A31A6NKX4 558 aa7.75□□□□□ -1.17
USP8-218ENST00000561330 HYAL3O43820 417 aaPredicted RBP7.75□□□□□ -1.17
USP8-218ENST00000561330 DNAJA2O60884 412 aa7.75□□□□□ -1.17
USP8-218ENST00000561330 CYP7A1P22680 504 aa7.75□□□□□ -1.17
USP8-218ENST00000561330 ETV3P41162 512 aa7.75□□□□□ -1.17
USP8-218ENST00000561330 GJA8P48165 433 aa7.75□□□□□ -1.17
USP8-218ENST00000561330 OXCT1P55809 520 aa7.75□□□□□ -1.17
USP8-218ENST00000561330 COL9A2Q14055 689 aaPredicted RBP7.75□□□□□ -1.17
USP8-218ENST00000561330 MSMPQ1L6U9 139 aa7.75□□□□□ -1.17
USP8-218ENST00000561330 ARTNQ5T4W7 220 aa7.75□□□□□ -1.17
USP8-218ENST00000561330 CDH24Q86UP0 819 aa7.75□□□□□ -1.17
USP8-218ENST00000561330 PHACTR4Q8IZ21 702 aa7.75□□□□□ -1.17
USP8-218ENST00000561330 RASGRP4Q8TDF6 673 aa7.75□□□□□ -1.17
USP8-218ENST00000561330 CEP131Q9UPN4 1083 aa7.75□□□□□ -1.17
USP8-218ENST00000561330 MAPK8IP1Q9UQF2 711 aa7.75□□□□□ -1.17
USP8-218ENST00000561330 GNAT3A8MTJ3 354 aa7.74□□□□□ -1.17
USP8-218ENST00000561330 KIAA1324LA8MWY0 1029 aaPredicted RBP7.74□□□□□ -1.17
USP8-218ENST00000561330 IMPDH2P12268 514 aa7.74□□□□□ -1.17
USP8-218ENST00000561330 TNNI2P48788 182 aa7.74□□□□□ -1.17
USP8-218ENST00000561330 ARSHQ5FYA8 562 aa7.74□□□□□ -1.17
USP8-218ENST00000561330 SFRP5Q5T4F7 317 aa7.74□□□□□ -1.17
USP8-218ENST00000561330 DTX1Q86Y01 620 aa7.74□□□□□ -1.17
USP8-218ENST00000561330 DNAJB8Q8NHS0 232 aa7.74□□□□□ -1.17
USP8-218ENST00000561330 NETO1Q8TDF5 533 aa7.74□□□□□ -1.17
USP8-218ENST00000561330 CCDC74BQ96LY2 380 aa7.74□□□□□ -1.17
USP8-218ENST00000561330 FERD3LQ96RJ6 166 aa7.74□□□□□ -1.17
USP8-218ENST00000561330 ZFP64Q9NPA5 681 aa7.74□□□□□ -1.17
USP8-218ENST00000561330 IGSF5Q9NSI5 407 aa7.74□□□□□ -1.17
USP8-218ENST00000561330 GINM1Q9NU53 330 aa7.74□□□□□ -1.17
USP8-218ENST00000561330 EFR3BQ9Y2G0 817 aa7.74□□□□□ -1.17
USP8-218ENST00000561330 RAG1P15918 1043 aa7.73□□□□□ -1.17
USP8-218ENST00000561330 ITIH2P19823 946 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms