RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 TNKSO95271 1327 aa16.74■□□□□ 0.27
RABGGTA-212ENST00000559974 GOLGA6L6A8MZA4 724 aa16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 UBE2Q2LH0YL09 131 aa16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 C21orf2O43822 256 aa16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 PCP11498 1178 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 MECOMQ03112 1051 aa16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 SEC23AQ15436 765 aa16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 C11orf57Q6ZUT1 292 aaPredicted RBP16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 ZNF830Q96NB3 372 aaPredicted RBP16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 TTC12Q9H892 705 aaPredicted RBP16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 ANO10Q9NW15 660 aa16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 PPP6R2O75170 966 aa16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 CMA1P23946 247 aa16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 IQCB1Q15051 598 aa16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 TMED8Q6PL24 325 aaPredicted RBP16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 NBPF11Q86T75 865 aa16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 FANCBQ8NB91 859 aa16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 C7orf43Q8WVR3 580 aa16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 SDF4Q9BRK5 362 aa16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 TAOK2Q9UL54 1235 aa16.73■□□□□ 0.27
RABGGTA-212ENST00000559974 IRS2Q9Y4H2 1338 aa16.72■□□□□ 0.27
RABGGTA-212ENST00000559974 SMIM22K7EJ46 135 aa16.72■□□□□ 0.27
RABGGTA-212ENST00000559974 DEXIO95424 95 aa16.72■□□□□ 0.27
RABGGTA-212ENST00000559974 FGRP09769 529 aa16.72■□□□□ 0.27
RABGGTA-212ENST00000559974 PPP2R5BQ15173 497 aa16.72■□□□□ 0.27
RABGGTA-212ENST00000559974 CRACR2BQ8N4Y2 399 aaPredicted RBP16.72■□□□□ 0.27
RABGGTA-212ENST00000559974 TTLL6Q8N841 843 aa16.72■□□□□ 0.27
RABGGTA-212ENST00000559974 JMYQ8N9B5 988 aa16.72■□□□□ 0.27
RABGGTA-212ENST00000559974 NUP133Q8WUM0 1156 aa16.72■□□□□ 0.27
RABGGTA-212ENST00000559974 MAP3K14Q99558 947 aa16.72■□□□□ 0.27
RABGGTA-212ENST00000559974 SNED1Q8TER0 1413 aa16.72■□□□□ 0.27
RABGGTA-212ENST00000559974 CYP2D7A0A087X1C5 515 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 WDHD1O75717 1129 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 BBOX1O75936 387 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 MMP1P03956 469 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 ALDH1B1P30837 517 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 GUCY1A2P33402 732 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 CHAF1AQ13111 956 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 PTPAQ15257 358 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 CTR9Q6PD62 1173 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 PLA2G4DQ86XP0 818 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 SPC24Q8NBT2 197 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 ZSCAN10Q96SZ4 725 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 ATP6V0A2Q9Y487 856 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 MROH7-TTC4A0A0A0MT08 1334 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 GOLGA6L19H0YKK7 550 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 PFKFB1P16118 471 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 MARCKSP29966 332 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 PRDX5P30044 214 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 ZNF75DP51815 510 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 SAFBQ15424 915 aaKnown RBP eCLIP16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 TXNRD3Q86VQ6 643 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 ENAHQ8N8S7 591 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 PIBF1Q8WXW3 757 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 CNKSR1Q969H4 720 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 CRNKL1Q9BZJ0 848 aaKnown RBP16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 TRIM5Q9C035 493 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 AATFQ9NY61 560 aaKnown RBP eCLIP16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 PIM2Q9P1W9 311 aa16.71■□□□□ 0.27
RABGGTA-212ENST00000559974 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.7■□□□□ 0.26
RABGGTA-212ENST00000559974 ZNF202O95125 648 aa16.7■□□□□ 0.26
RABGGTA-212ENST00000559974 NOSTRINQ8IVI9 506 aa16.7■□□□□ 0.26
RABGGTA-212ENST00000559974 POLLQ9UGP5 575 aa16.7■□□□□ 0.26
RABGGTA-212ENST00000559974 BCS1LQ9Y276 419 aa16.7■□□□□ 0.26
RABGGTA-212ENST00000559974 USP17L12C9JPN9 530 aa16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 USP17L21D6R901 530 aa16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 IQCA1Q86XH1 822 aa16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 SP8Q8IXZ3 490 aa16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 CEP57L1Q8IYX8 460 aa16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 KIAA1468Q9P260 1216 aa16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 ANKIB1Q9P2G1 1089 aa16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 IFIT1BQ5T764 474 aaKnown RBP16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 SPTY2D1Q68D10 685 aaPredicted RBP16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 SARM1Q6SZW1 724 aa16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 DIS3L2Q8IYB7 885 aaKnown RBP16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 CMTR1Q8N1G2 835 aaKnown RBP16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 CCDC82Q8N4S0 544 aa16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 ERCC4Q92889 916 aaPredicted RBP16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 RNF26Q9BY78 433 aaPredicted RBP16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 NAT10Q9H0A0 1025 aaKnown RBP16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 FOXP1Q9H334 677 aaPredicted RBP16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 DCP1AQ9NPI6 582 aaPredicted RBP16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 ATP8A2Q9NTI2 1148 aa16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 LEMD3Q9Y2U8 911 aa16.69■□□□□ 0.26
RABGGTA-212ENST00000559974 BTBD18B2RXH4 712 aa16.68■□□□□ 0.26
RABGGTA-212ENST00000559974 ORC4O43929 436 aa16.68■□□□□ 0.26
RABGGTA-212ENST00000559974 PRDM1O75626 825 aa16.68■□□□□ 0.26
RABGGTA-212ENST00000559974 DALRD3Q5D0E6 543 aaKnown RBP16.68■□□□□ 0.26
RABGGTA-212ENST00000559974 TIGD1Q96MW7 591 aa16.68■□□□□ 0.26
RABGGTA-212ENST00000559974 KCNF1Q9H3M0 494 aa16.68■□□□□ 0.26
RABGGTA-212ENST00000559974 ARPP21Q9UBL0 812 aaPredicted RBP16.68■□□□□ 0.26
RABGGTA-212ENST00000559974 KCNJ14Q9UNX9 436 aa16.68■□□□□ 0.26
RABGGTA-212ENST00000559974 HPSEQ9Y251 543 aa16.68■□□□□ 0.26
RABGGTA-212ENST00000559974 A0A087WWV3 80 aa16.68■□□□□ 0.26
RABGGTA-212ENST00000559974 FAM237AA0A1B0GTK4 181 aa16.68■□□□□ 0.26
RABGGTA-212ENST00000559974 BECN2A8MW95 431 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms