RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 GRM8O00222 908 aa7.37□□□□□ -1.23
USP3-215ENST00000559771 NR3C2P08235 984 aa7.37□□□□□ -1.23
USP3-215ENST00000559771 GJA5P36382 358 aa7.37□□□□□ -1.23
USP3-215ENST00000559771 CAP1Q01518 475 aa7.37□□□□□ -1.23
USP3-215ENST00000559771 IFIT5Q13325 482 aaKnown RBP7.37□□□□□ -1.23
USP3-215ENST00000559771 GRIK5Q16478 980 aa7.37□□□□□ -1.23
USP3-215ENST00000559771 DIEXFQ68CQ4 756 aaKnown RBP7.37□□□□□ -1.23
USP3-215ENST00000559771 APOBEC3FQ8IUX4 373 aaKnown RBP7.37□□□□□ -1.23
USP3-215ENST00000559771 MEIOBQ8N635 442 aa7.37□□□□□ -1.23
USP3-215ENST00000559771 NUDT12Q9BQG2 462 aa7.37□□□□□ -1.23
USP3-215ENST00000559771 PUS3Q9BZE2 481 aaKnown RBP7.37□□□□□ -1.23
USP3-215ENST00000559771 ANGEL1Q9UNK9 670 aaKnown RBP7.37□□□□□ -1.23
USP3-215ENST00000559771 MKI67P46013 3256 aaKnown RBP7.37□□□□□ -1.23
USP3-215ENST00000559771 UTYO14607 1347 aa7.36□□□□□ -1.23
USP3-215ENST00000559771 FAM205AQ6ZU69 1335 aa7.36□□□□□ -1.23
USP3-215ENST00000559771 CLRN2A0PK11 232 aa7.36□□□□□ -1.23
USP3-215ENST00000559771 F8W031 263 aaPredicted RBP7.36□□□□□ -1.23
USP3-215ENST00000559771 IGF2BP3O00425 579 aaKnown RBP eCLIP7.36□□□□□ -1.23
USP3-215ENST00000559771 NBPF7P0C2Y1 421 aaPredicted RBP7.36□□□□□ -1.23
USP3-215ENST00000559771 VARSP26640 1264 aaKnown RBP7.36□□□□□ -1.23
USP3-215ENST00000559771 KCNJ4P48050 445 aa7.36□□□□□ -1.23
USP3-215ENST00000559771 FKBP1AP62942 108 aaKnown RBP7.36□□□□□ -1.23
USP3-215ENST00000559771 TTLL12Q14166 644 aaPredicted RBP7.36□□□□□ -1.23
USP3-215ENST00000559771 DLGAP5Q15398 846 aa7.36□□□□□ -1.23
USP3-215ENST00000559771 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.36□□□□□ -1.23
USP3-215ENST00000559771 CFAP100Q494V2 611 aa7.36□□□□□ -1.23
USP3-215ENST00000559771 NBPF12Q5TAG4 269 aaPredicted RBP7.36□□□□□ -1.23
USP3-215ENST00000559771 BEND7Q8N7W2 519 aaPredicted RBP7.36□□□□□ -1.23
USP3-215ENST00000559771 TDRD7Q8NHU6 1098 aaKnown RBP7.36□□□□□ -1.23
USP3-215ENST00000559771 BAP1Q92560 729 aa7.36□□□□□ -1.23
USP3-215ENST00000559771 SUCLG2Q96I99 432 aa7.36□□□□□ -1.23
USP3-215ENST00000559771 HDAC9Q9UKV0 1011 aa7.36□□□□□ -1.23
USP3-215ENST00000559771 USP2O75604 605 aaPredicted RBP7.35□□□□□ -1.23
USP3-215ENST00000559771 ALDH1L1O75891 902 aa7.35□□□□□ -1.23
USP3-215ENST00000559771 NF2P35240 595 aa7.35□□□□□ -1.23
USP3-215ENST00000559771 GYG1P46976 350 aa7.35□□□□□ -1.23
USP3-215ENST00000559771 SRSF11Q05519 484 aaKnown RBP7.35□□□□□ -1.23
USP3-215ENST00000559771 GAS6Q14393 721 aa7.35□□□□□ -1.23
USP3-215ENST00000559771 RABL6Q3YEC7 729 aaPredicted RBP7.35□□□□□ -1.23
USP3-215ENST00000559771 LDHAL6AQ6ZMR3 332 aa7.35□□□□□ -1.23
USP3-215ENST00000559771 ARMC9Q7Z3E5 817 aa7.35□□□□□ -1.23
USP3-215ENST00000559771 ZNF804AQ7Z570 1209 aa7.35□□□□□ -1.23
USP3-215ENST00000559771 ANKRD44Q8N8A2 993 aa7.35□□□□□ -1.23
USP3-215ENST00000559771 VGLL2Q8N8G2 317 aa7.35□□□□□ -1.23
USP3-215ENST00000559771 WNK4Q96J92 1243 aa7.35□□□□□ -1.23
USP3-215ENST00000559771 FAM84BQ96KN1 310 aaPredicted RBP7.35□□□□□ -1.23
USP3-215ENST00000559771 TEPSINQ96N21 525 aa7.35□□□□□ -1.23
USP3-215ENST00000559771 PTPN18Q99952 460 aa7.35□□□□□ -1.23
USP3-215ENST00000559771 RIPOR2Q9Y4F9 1068 aa7.35□□□□□ -1.23
USP3-215ENST00000559771 RBBP6Q7Z6E9 1792 aaKnown RBP7.34□□□□□ -1.23
USP3-215ENST00000559771 PLIN1O60240 522 aa7.34□□□□□ -1.23
USP3-215ENST00000559771 FKTNO75072 461 aa7.34□□□□□ -1.23
USP3-215ENST00000559771 SREBF2Q12772 1141 aa7.34□□□□□ -1.23
USP3-215ENST00000559771 UBE4AQ14139 1066 aa7.34□□□□□ -1.23
USP3-215ENST00000559771 RASA3Q14644 834 aa7.34□□□□□ -1.23
USP3-215ENST00000559771 PKN2Q16513 984 aaKnown RBP7.34□□□□□ -1.23
USP3-215ENST00000559771 CCDC57Q2TAC2 916 aa7.34□□□□□ -1.23
USP3-215ENST00000559771 LINC01559Q495D7 138 aa7.34□□□□□ -1.23
USP3-215ENST00000559771 FBXO46Q6PJ61 603 aaPredicted RBP7.34□□□□□ -1.23
USP3-215ENST00000559771 SH3RF1Q7Z6J0 888 aa7.34□□□□□ -1.23
USP3-215ENST00000559771 FBXO33Q7Z6M2 555 aa7.34□□□□□ -1.23
USP3-215ENST00000559771 SYMPKQ92797 1274 aaKnown RBP7.34□□□□□ -1.23
USP3-215ENST00000559771 CDK15Q96Q40 435 aa7.34□□□□□ -1.23
USP3-215ENST00000559771 ZNF70Q9UC06 446 aaPredicted RBP7.34□□□□□ -1.23
USP3-215ENST00000559771 CHMP3Q9Y3E7 222 aa7.34□□□□□ -1.23
USP3-215ENST00000559771 PPP2R3BQ9Y5P8 575 aa7.34□□□□□ -1.23
USP3-215ENST00000559771 TESPA1A2RU30 521 aaPredicted RBP7.33□□□□□ -1.24
USP3-215ENST00000559771 MANSC4A6NHS7 340 aaPredicted RBP7.33□□□□□ -1.24
USP3-215ENST00000559771 UNCXA6NJT0 531 aa7.33□□□□□ -1.24
USP3-215ENST00000559771 ZBTB48P10074 688 aaPredicted RBP7.33□□□□□ -1.24
USP3-215ENST00000559771 MAP3K10Q02779 954 aa7.33□□□□□ -1.24
USP3-215ENST00000559771 LRRC24Q50LG9 513 aa7.33□□□□□ -1.24
USP3-215ENST00000559771 MFSD14BQ5SR56 506 aa7.33□□□□□ -1.24
USP3-215ENST00000559771 SLC4A10Q6U841 1118 aa7.33□□□□□ -1.24
USP3-215ENST00000559771 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.33□□□□□ -1.24
USP3-215ENST00000559771 SV2AQ7L0J3 742 aa7.33□□□□□ -1.24
USP3-215ENST00000559771 KLHDC4Q8TBB5 520 aa7.33□□□□□ -1.24
USP3-215ENST00000559771 SLC10A4Q96EP9 437 aa7.33□□□□□ -1.24
USP3-215ENST00000559771 SRCIN1Q9C0H9 1055 aa7.33□□□□□ -1.24
USP3-215ENST00000559771 BICC1Q9H694 974 aaKnown RBP7.33□□□□□ -1.24
USP3-215ENST00000559771 TDRD3Q9H7E2 651 aaKnown RBP7.33□□□□□ -1.24
USP3-215ENST00000559771 VEZTQ9HBM0 779 aa7.33□□□□□ -1.24
USP3-215ENST00000559771 GOLGA2P5Q9HBQ8 144 aa7.33□□□□□ -1.24
USP3-215ENST00000559771 CNNM1Q9NRU3 951 aa7.33□□□□□ -1.24
USP3-215ENST00000559771 C9orf78Q9NZ63 289 aaPredicted RBP7.33□□□□□ -1.24
USP3-215ENST00000559771 ZSWIM8A7E2V4 1837 aa7.33□□□□□ -1.24
USP3-215ENST00000559771 PDE4DIPQ5VU43 2346 aa7.33□□□□□ -1.24
USP3-215ENST00000559771 ANP32CO43423 234 aa7.32□□□□□ -1.24
USP3-215ENST00000559771 PPP1R12BO60237 982 aaPredicted RBP7.32□□□□□ -1.24
USP3-215ENST00000559771 HIBADHP31937 336 aaKnown RBP7.32□□□□□ -1.24
USP3-215ENST00000559771 RFX5P48382 616 aaPredicted RBP7.32□□□□□ -1.24
USP3-215ENST00000559771 INHBEP58166 350 aa7.32□□□□□ -1.24
USP3-215ENST00000559771 CRHR2Q13324 411 aa7.32□□□□□ -1.24
USP3-215ENST00000559771 SUPT20HL1Q3ZLR7 823 aa7.32□□□□□ -1.24
USP3-215ENST00000559771 OTOP1Q7RTM1 612 aa7.32□□□□□ -1.24
USP3-215ENST00000559771 DZIP1LQ8IYY4 767 aaKnown RBP7.32□□□□□ -1.24
USP3-215ENST00000559771 FAM9BQ8IZU0 186 aa7.32□□□□□ -1.24
USP3-215ENST00000559771 TMEM39BQ9GZU3 492 aa7.32□□□□□ -1.24
USP3-215ENST00000559771 USP44Q9H0E7 712 aa7.32□□□□□ -1.24
USP3-215ENST00000559771 SERPINA10Q9UK55 444 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms