RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 FAM177A1Q8N128 213 aaPredicted RBP9.61□□□□□ -0.87
SPG11-209ENST00000558253 HELBQ8NG08 1087 aaPredicted RBP9.61□□□□□ -0.87
SPG11-209ENST00000558253 KIAA1524Q8TCG1 905 aa9.61□□□□□ -0.87
SPG11-209ENST00000558253 SETDB2Q96T68 719 aa9.61□□□□□ -0.87
SPG11-209ENST00000558253 UBAC1Q9BSL1 405 aa9.61□□□□□ -0.87
SPG11-209ENST00000558253 SEC31BQ9NQW1 1179 aa9.61□□□□□ -0.87
SPG11-209ENST00000558253 RBM28Q9NW13 759 aaKnown RBP9.61□□□□□ -0.87
SPG11-209ENST00000558253 KIAA1468Q9P260 1216 aa9.61□□□□□ -0.87
SPG11-209ENST00000558253 IMPACTQ9P2X3 320 aa9.61□□□□□ -0.87
SPG11-209ENST00000558253 TIAM2Q8IVF5 1701 aa9.61□□□□□ -0.87
SPG11-209ENST00000558253 DDX60Q8IY21 1712 aaKnown RBP9.6□□□□□ -0.87
SPG11-209ENST00000558253 ZPR1O75312 459 aa9.6□□□□□ -0.87
SPG11-209ENST00000558253 GSDMDP57764 484 aa9.6□□□□□ -0.87
SPG11-209ENST00000558253 RPS8P62241 208 aaKnown RBP9.6□□□□□ -0.87
SPG11-209ENST00000558253 AKAP17AQ02040 695 aaKnown RBP9.6□□□□□ -0.87
SPG11-209ENST00000558253 CEBPZQ03701 1054 aaKnown RBP9.6□□□□□ -0.87
SPG11-209ENST00000558253 PPARAQ07869 468 aa9.6□□□□□ -0.87
SPG11-209ENST00000558253 CT47A1Q5JQC4 288 aaPredicted RBP9.6□□□□□ -0.87
SPG11-209ENST00000558253 KANK3Q6NY19 840 aa9.6□□□□□ -0.87
SPG11-209ENST00000558253 LUZP1Q86V48 1076 aa9.6□□□□□ -0.87
SPG11-209ENST00000558253 IQCA1Q86XH1 822 aa9.6□□□□□ -0.87
SPG11-209ENST00000558253 DRC7Q8IY82 874 aa9.6□□□□□ -0.87
SPG11-209ENST00000558253 FNBP4Q8N3X1 1017 aaPredicted RBP9.6□□□□□ -0.87
SPG11-209ENST00000558253 ACSBG1Q96GR2 724 aa9.6□□□□□ -0.87
SPG11-209ENST00000558253 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.6□□□□□ -0.87
SPG11-209ENST00000558253 RNF26Q9BY78 433 aaPredicted RBP9.6□□□□□ -0.87
SPG11-209ENST00000558253 ARMT1Q9H993 441 aa9.6□□□□□ -0.87
SPG11-209ENST00000558253 EPB41L4AQ9HCS5 686 aaPredicted RBP9.6□□□□□ -0.87
SPG11-209ENST00000558253 ATP8A2Q9NTI2 1148 aa9.6□□□□□ -0.87
SPG11-209ENST00000558253 RAI14Q9P0K7 980 aa9.6□□□□□ -0.87
SPG11-209ENST00000558253 MINPP1Q9UNW1 487 aa9.6□□□□□ -0.87
SPG11-209ENST00000558253 CLIC4Q9Y696 253 aa9.6□□□□□ -0.87
SPG11-209ENST00000558253 NEDD4P46934 1319 aa9.59□□□□□ -0.87
SPG11-209ENST00000558253 DOCK2Q92608 1830 aa9.59□□□□□ -0.87
SPG11-209ENST00000558253 IKBKBO14920 756 aa9.59□□□□□ -0.87
SPG11-209ENST00000558253 NRDCO43847 1150 aa9.59□□□□□ -0.87
SPG11-209ENST00000558253 ZNF202O95125 648 aa9.59□□□□□ -0.87
SPG11-209ENST00000558253 TUBB4AP04350 444 aa9.59□□□□□ -0.87
SPG11-209ENST00000558253 NLRP12P59046 1061 aa9.59□□□□□ -0.87
SPG11-209ENST00000558253 GUCY1B3Q02153 619 aa9.59□□□□□ -0.87
SPG11-209ENST00000558253 ERFEQ4G0M1 354 aa9.59□□□□□ -0.87
SPG11-209ENST00000558253 TPRNQ4KMQ1 711 aa9.59□□□□□ -0.87
SPG11-209ENST00000558253 SBK1Q52WX2 424 aa9.59□□□□□ -0.87
SPG11-209ENST00000558253 AXDND1Q5T1B0 1012 aaPredicted RBP9.59□□□□□ -0.87
SPG11-209ENST00000558253 NOSTRINQ8IVI9 506 aa9.59□□□□□ -0.87
SPG11-209ENST00000558253 CRACR2BQ8N4Y2 399 aaPredicted RBP9.59□□□□□ -0.87
SPG11-209ENST00000558253 ZNF454Q8N9F8 522 aa9.59□□□□□ -0.87
SPG11-209ENST00000558253 FANCBQ8NB91 859 aa9.59□□□□□ -0.87
SPG11-209ENST00000558253 RNF166Q96A37 237 aaPredicted RBP9.59□□□□□ -0.87
SPG11-209ENST00000558253 PYM1Q9BRP8 204 aaKnown RBP9.59□□□□□ -0.87
SPG11-209ENST00000558253 DNAJC25Q9H1X3 360 aa9.59□□□□□ -0.87
SPG11-209ENST00000558253 GOLPH3LQ9H4A5 285 aa9.59□□□□□ -0.87
SPG11-209ENST00000558253 FAM217BQ9NTX9 383 aaPredicted RBP9.59□□□□□ -0.87
SPG11-209ENST00000558253 HPSEQ9Y251 543 aa9.59□□□□□ -0.87
SPG11-209ENST00000558253 SPATA31A6Q5VVP1 1343 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 BCORQ6W2J9 1755 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 A0A0G2JS52 829 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 ORC4O43929 436 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 DDAH1O94760 285 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 MMP1P03956 469 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 POLR3DP05423 398 aaPredicted RBP9.58□□□□□ -0.88
SPG11-209ENST00000558253 HIBADHP31937 336 aaKnown RBP9.58□□□□□ -0.88
SPG11-209ENST00000558253 PBX2P40425 430 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 SYKP43405 635 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 NDUFA8P51970 172 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 GSTO1P78417 241 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 DNTTIP2Q5QJE6 756 aaKnown RBP9.58□□□□□ -0.88
SPG11-209ENST00000558253 RESP18Q5W5W9 173 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 CATIPQ7Z7H3 387 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 MICU3Q86XE3 530 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 LCORLQ8N3X6 602 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 KRI1Q8N9T8 703 aaKnown RBP9.58□□□□□ -0.88
SPG11-209ENST00000558253 LINC00116Q8NCU8 138 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 MAP3K14Q99558 947 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 SLC26A6Q9BXS9 759 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 CRNKL1Q9BZJ0 848 aaKnown RBP9.58□□□□□ -0.88
SPG11-209ENST00000558253 BRMS1Q9HCU9 246 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 KCND1Q9NSA2 647 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 FAM13BQ9NYF5 915 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 CLIP2Q9UDT6 1046 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 DACH1Q9UI36 760 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 LEMD3Q9Y2U8 911 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 RTCBQ9Y3I0 505 aaKnown RBP9.58□□□□□ -0.88
SPG11-209ENST00000558253 R3HCC1Q9Y3T6 440 aaKnown RBP9.58□□□□□ -0.88
SPG11-209ENST00000558253 PCDHGA10Q9Y5H3 936 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 MYH15Q9Y2K3 1946 aa9.58□□□□□ -0.88
SPG11-209ENST00000558253 COL5A3P25940 1745 aaPredicted RBP9.57□□□□□ -0.88
SPG11-209ENST00000558253 NUTM2BA6NNL0 878 aaPredicted RBP9.57□□□□□ -0.88
SPG11-209ENST00000558253 FAM177BA6PVY3 158 aa9.57□□□□□ -0.88
SPG11-209ENST00000558253 NUTM2EB1AL46 878 aaPredicted RBP9.57□□□□□ -0.88
SPG11-209ENST00000558253 KIF2AO00139 706 aaPredicted RBP9.57□□□□□ -0.88
SPG11-209ENST00000558253 PRPF3O43395 683 aaKnown RBP9.57□□□□□ -0.88
SPG11-209ENST00000558253 CBFA2T2O43439 604 aa9.57□□□□□ -0.88
SPG11-209ENST00000558253 PFKFB1P16118 471 aa9.57□□□□□ -0.88
SPG11-209ENST00000558253 CDC27P30260 824 aa9.57□□□□□ -0.88
SPG11-209ENST00000558253 GTF2F1P35269 517 aaKnown RBP eCLIP9.57□□□□□ -0.88
SPG11-209ENST00000558253 PTPAQ15257 358 aa9.57□□□□□ -0.88
SPG11-209ENST00000558253 SEC23AQ15436 765 aa9.57□□□□□ -0.88
SPG11-209ENST00000558253 C15orf52Q6ZUT6 534 aaKnown RBP9.57□□□□□ -0.88
SPG11-209ENST00000558253 NBPF5PQ86XG9 351 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms