RNA–Protein interactions for RNA: ENST00000557057.5

ALKBH1-204, Transcript of alkB homolog 1, histone H2A dioxygenase, humanhuman

TSL 3

Gene ALKBH1, Length 1,750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH1-204ENST00000557057 CALM2P0DP24 149 aa20.9■□□□□ 0.94
ALKBH1-204ENST00000557057 CALM3P0DP25 149 aa20.9■□□□□ 0.94
ALKBH1-204ENST00000557057 UBE2HP62256 183 aa20.9■□□□□ 0.94
ALKBH1-204ENST00000557057 SSRP1Q08945 709 aaKnown RBP20.9■□□□□ 0.94
ALKBH1-204ENST00000557057 KIAA0825Q8IV33 1275 aa20.9■□□□□ 0.94
ALKBH1-204ENST00000557057 ALG1Q9BT22 464 aa20.9■□□□□ 0.94
ALKBH1-204ENST00000557057 SCAND2PQ9GZW5 306 aaPredicted RBP20.9■□□□□ 0.94
ALKBH1-204ENST00000557057 YDJCA8MPS7 323 aa20.9■□□□□ 0.94
ALKBH1-204ENST00000557057 TROAPQ12815 778 aa20.9■□□□□ 0.94
ALKBH1-204ENST00000557057 CDC42EP5Q6NZY7 148 aa20.9■□□□□ 0.94
ALKBH1-204ENST00000557057 ZNF444Q8N0Y2 327 aaPredicted RBP20.9■□□□□ 0.94
ALKBH1-204ENST00000557057 SLC44A5Q8NCS7 719 aa20.9■□□□□ 0.94
ALKBH1-204ENST00000557057 SLC26A6Q9BXS9 759 aa20.9■□□□□ 0.94
ALKBH1-204ENST00000557057 TCP11L1Q9NUJ3 509 aa20.9■□□□□ 0.94
ALKBH1-204ENST00000557057 ELP1O95163 1332 aa20.9■□□□□ 0.94
ALKBH1-204ENST00000557057 RASA1P20936 1047 aa20.89■□□□□ 0.93
ALKBH1-204ENST00000557057 CCDC178Q5BJE1 867 aa20.89■□□□□ 0.93
ALKBH1-204ENST00000557057 SOGA3Q5TF21 947 aa20.89■□□□□ 0.93
ALKBH1-204ENST00000557057 OTUD7BQ6GQQ9 843 aa20.89■□□□□ 0.93
ALKBH1-204ENST00000557057 NBPF11Q86T75 865 aa20.89■□□□□ 0.93
ALKBH1-204ENST00000557057 TTC6Q86TZ1 520 aa20.89■□□□□ 0.93
ALKBH1-204ENST00000557057 DGKHQ86XP1 1220 aa20.89■□□□□ 0.93
ALKBH1-204ENST00000557057 ANKS1AQ92625 1134 aa20.89■□□□□ 0.93
ALKBH1-204ENST00000557057 DDX4Q9NQI0 724 aaKnown RBP20.89■□□□□ 0.93
ALKBH1-204ENST00000557057 PIM2Q9P1W9 311 aa20.89■□□□□ 0.93
ALKBH1-204ENST00000557057 MYH1P12882 1939 aa20.88■□□□□ 0.93
ALKBH1-204ENST00000557057 CDK8P49336 464 aa20.88■□□□□ 0.93
ALKBH1-204ENST00000557057 PICALMQ13492 652 aa20.88■□□□□ 0.93
ALKBH1-204ENST00000557057 RCSD1Q6JBY9 416 aa20.88■□□□□ 0.93
ALKBH1-204ENST00000557057 TRIM22Q8IYM9 498 aa20.88■□□□□ 0.93
ALKBH1-204ENST00000557057 CRACR2BQ8N4Y2 399 aaPredicted RBP20.88■□□□□ 0.93
ALKBH1-204ENST00000557057 ADAMTSL1Q8N6G6 1762 aa20.88■□□□□ 0.93
ALKBH1-204ENST00000557057 WASF1Q92558 559 aa20.88■□□□□ 0.93
ALKBH1-204ENST00000557057 AIFM3Q96NN9 605 aa20.88■□□□□ 0.93
ALKBH1-204ENST00000557057 VPS33BQ9H267 617 aa20.88■□□□□ 0.93
ALKBH1-204ENST00000557057 IL17RBQ9NRM6 502 aa20.88■□□□□ 0.93
ALKBH1-204ENST00000557057 RBM28Q9NW13 759 aaKnown RBP20.88■□□□□ 0.93
ALKBH1-204ENST00000557057 TSPY3P0CV98 308 aa20.87■□□□□ 0.93
ALKBH1-204ENST00000557057 TSPY8P0CW00 308 aa20.87■□□□□ 0.93
ALKBH1-204ENST00000557057 ILDR1Q86SU0 546 aaPredicted RBP20.87■□□□□ 0.93
ALKBH1-204ENST00000557057 GJB4Q9NTQ9 266 aa20.87■□□□□ 0.93
ALKBH1-204ENST00000557057 TFIP11Q9UBB9 837 aaKnown RBP20.87■□□□□ 0.93
ALKBH1-204ENST00000557057 SERPINA10Q9UK55 444 aa20.87■□□□□ 0.93
ALKBH1-204ENST00000557057 CFAP45Q9UL16 551 aa20.87■□□□□ 0.93
ALKBH1-204ENST00000557057 R3HDM1Q15032 1099 aaKnown RBP20.87■□□□□ 0.93
ALKBH1-204ENST00000557057 ATL3Q6DD88 541 aa20.87■□□□□ 0.93
ALKBH1-204ENST00000557057 RBM27Q9P2N5 1060 aaKnown RBP20.87■□□□□ 0.93
ALKBH1-204ENST00000557057 ZSCAN23Q3MJ62 389 aa20.86■□□□□ 0.93
ALKBH1-204ENST00000557057 LEO1Q8WVC0 666 aaPredicted RBP20.86■□□□□ 0.93
ALKBH1-204ENST00000557057 SPATA32Q96LK8 384 aa20.86■□□□□ 0.93
ALKBH1-204ENST00000557057 OSBPL5Q9H0X9 879 aaPredicted RBP20.86■□□□□ 0.93
ALKBH1-204ENST00000557057 TMEM63CQ9P1W3 806 aa20.86■□□□□ 0.93
ALKBH1-204ENST00000557057 FSD2A1L4K1 749 aa20.85■□□□□ 0.93
ALKBH1-204ENST00000557057 DEXIO95424 95 aa20.85■□□□□ 0.93
ALKBH1-204ENST00000557057 GABPAQ06546 454 aa20.85■□□□□ 0.93
ALKBH1-204ENST00000557057 KRT40Q6A162 431 aa20.85■□□□□ 0.93
ALKBH1-204ENST00000557057 LARGE2Q8N3Y3 721 aa20.85■□□□□ 0.93
ALKBH1-204ENST00000557057 ZNF277Q9NRM2 450 aaPredicted RBP20.85■□□□□ 0.93
ALKBH1-204ENST00000557057 UBE2Q2LH0YL09 131 aa20.85■□□□□ 0.93
ALKBH1-204ENST00000557057 KIF23Q02241 960 aaPredicted RBP20.85■□□□□ 0.93
ALKBH1-204ENST00000557057 FUT2Q10981 343 aa20.85■□□□□ 0.93
ALKBH1-204ENST00000557057 BRAPQ7Z569 592 aa20.85■□□□□ 0.93
ALKBH1-204ENST00000557057 CMTR1Q8N1G2 835 aaKnown RBP20.85■□□□□ 0.93
ALKBH1-204ENST00000557057 ZNF396Q96N95 335 aaPredicted RBP20.85■□□□□ 0.93
ALKBH1-204ENST00000557057 RNF26Q9BY78 433 aaPredicted RBP20.85■□□□□ 0.93
ALKBH1-204ENST00000557057 KAT14Q9H8E8 782 aa20.85■□□□□ 0.93
ALKBH1-204ENST00000557057 ISY1Q9ULR0 285 aaKnown RBP20.85■□□□□ 0.93
ALKBH1-204ENST00000557057 GOLGB1Q14789 3259 aaKnown RBP20.84■□□□□ 0.93
ALKBH1-204ENST00000557057 ECM29Q5VYK3 1845 aa20.84■□□□□ 0.93
ALKBH1-204ENST00000557057 GUCY1A2P33402 732 aa20.84■□□□□ 0.93
ALKBH1-204ENST00000557057 ZNF445P59923 1031 aa20.84■□□□□ 0.93
ALKBH1-204ENST00000557057 TRIM29Q14134 588 aa20.84■□□□□ 0.93
ALKBH1-204ENST00000557057 DALRD3Q5D0E6 543 aaKnown RBP20.84■□□□□ 0.93
ALKBH1-204ENST00000557057 TMTC3Q6ZXV5 915 aa20.84■□□□□ 0.93
ALKBH1-204ENST00000557057 NEDD1Q8NHV4 660 aa20.84■□□□□ 0.93
ALKBH1-204ENST00000557057 CTCFLQ8NI51 663 aaPredicted RBP20.84■□□□□ 0.93
ALKBH1-204ENST00000557057 PCDHAC2Q9Y5I4 1007 aa20.84■□□□□ 0.93
ALKBH1-204ENST00000557057 MYH15Q9Y2K3 1946 aa20.83■□□□□ 0.93
ALKBH1-204ENST00000557057 MYO3BQ8WXR4 1341 aa20.83■□□□□ 0.93
ALKBH1-204ENST00000557057 PSME4Q14997 1843 aa20.83■□□□□ 0.93
ALKBH1-204ENST00000557057 GOLGA6L3A6NEY3 463 aa20.83■□□□□ 0.93
ALKBH1-204ENST00000557057 NFIAQ12857 509 aa20.83■□□□□ 0.93
ALKBH1-204ENST00000557057 CCDC82Q8N4S0 544 aa20.83■□□□□ 0.93
ALKBH1-204ENST00000557057 UPF1Q92900 1129 aaKnown RBP eCLIP20.83■□□□□ 0.93
ALKBH1-204ENST00000557057 SYAP1Q96A49 352 aaPredicted RBP20.83■□□□□ 0.93
ALKBH1-204ENST00000557057 SGIP1Q9BQI5 828 aa20.83■□□□□ 0.93
ALKBH1-204ENST00000557057 COL4A5P29400 1685 aa20.83■□□□□ 0.92
ALKBH1-204ENST00000557057 KIF28PB7ZC32 967 aa20.82■□□□□ 0.92
ALKBH1-204ENST00000557057 PLEKHA8P1O95397 391 aa20.82■□□□□ 0.92
ALKBH1-204ENST00000557057 RBM5P52756 815 aaKnown RBP eCLIP20.82■□□□□ 0.92
ALKBH1-204ENST00000557057 RSBN1LQ6PCB5 846 aaPredicted RBP20.82■□□□□ 0.92
ALKBH1-204ENST00000557057 MAP3K14Q99558 947 aa20.82■□□□□ 0.92
ALKBH1-204ENST00000557057 IDI2Q9BXS1 227 aa20.82■□□□□ 0.92
ALKBH1-204ENST00000557057 NPM3O75607 178 aaKnown RBP20.82■□□□□ 0.92
ALKBH1-204ENST00000557057 PNMA1Q8ND90 353 aa20.82■□□□□ 0.92
ALKBH1-204ENST00000557057 USP28Q96RU2 1077 aa20.82■□□□□ 0.92
ALKBH1-204ENST00000557057 SWAP70Q9UH65 585 aa20.82■□□□□ 0.92
ALKBH1-204ENST00000557057 PRPF3O43395 683 aaKnown RBP20.81■□□□□ 0.92
ALKBH1-204ENST00000557057 VIL1P09327 827 aaKnown RBP20.81■□□□□ 0.92
ALKBH1-204ENST00000557057 KIF5BP33176 963 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms